RNA–Protein interactions for RNA: ENST00000444739.6

CASP4-203, Transcript of caspase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP4, Length 2,158 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-203ENST00000444739 RETNQ9HD89 108 aa6.33□□□□□ -1.4
CASP4-203ENST00000444739 TRRAPQ9Y4A5 3859 aa6.33□□□□□ -1.4
CASP4-203ENST00000444739 IGLV8-61A0A075B6I0 122 aa6.33□□□□□ -1.4
CASP4-203ENST00000444739 REG3GQ6UW15 175 aa6.33□□□□□ -1.4
CASP4-203ENST00000444739 C9orf163Q8N9P6 203 aa6.32□□□□□ -1.4
CASP4-203ENST00000444739 PRR15LQ9BU68 103 aa6.32□□□□□ -1.4
CASP4-203ENST00000444739 LINC00588Q9Y4M8 146 aa6.32□□□□□ -1.4
CASP4-203ENST00000444739 LOC100996750A0A140TA64 210 aa6.31□□□□□ -1.4
CASP4-203ENST00000444739 CASC10Q5T4H9 136 aa6.31□□□□□ -1.4
CASP4-203ENST00000444739 KRTAP4-6Q9BYQ5 205 aa6.31□□□□□ -1.4
CASP4-203ENST00000444739 ITPR2Q14571 2701 aa6.31□□□□□ -1.4
CASP4-203ENST00000444739 DNAH10OSP0CZ25 163 aa6.31□□□□□ -1.4
CASP4-203ENST00000444739 CNBPP62633 177 aaKnown RBP6.31□□□□□ -1.4
CASP4-203ENST00000444739 CASC2Q6XLA1 102 aa6.31□□□□□ -1.4
CASP4-203ENST00000444739 SMR3AQ99954 134 aa6.31□□□□□ -1.4
CASP4-203ENST00000444739 NOTCH2Q04721 2471 aa6.29□□□□□ -1.4
CASP4-203ENST00000444739 TENM4Q6N022 2769 aa6.29□□□□□ -1.4
CASP4-203ENST00000444739 F8P00451 2351 aa6.29□□□□□ -1.4
CASP4-203ENST00000444739 Q75L30 129 aa6.29□□□□□ -1.4
CASP4-203ENST00000444739 KTN1-AS1Q86SY8 53 aa6.29□□□□□ -1.4
CASP4-203ENST00000444739 OTOGQ6ZRI0 2925 aa6.29□□□□□ -1.4
CASP4-203ENST00000444739 LCA10Q71F78 164 aa6.28□□□□□ -1.4
CASP4-203ENST00000444739 LOC101927531A0A1B0GV80 90 aa6.28□□□□□ -1.4
CASP4-203ENST00000444739 A8MWP4 228 aa6.27□□□□□ -1.41
CASP4-203ENST00000444739 LORP23490 312 aaPredicted RBP6.27□□□□□ -1.41
CASP4-203ENST00000444739 PRLHP81277 87 aa6.27□□□□□ -1.41
CASP4-203ENST00000444739 ATP11AUNQ6ZP68 121 aa6.27□□□□□ -1.41
CASP4-203ENST00000444739 COA5Q86WW8 74 aa6.27□□□□□ -1.41
CASP4-203ENST00000444739 TENM3Q9P273 2699 aa6.26□□□□□ -1.41
CASP4-203ENST00000444739 TEP1Q99973 2627 aaKnown RBP6.26□□□□□ -1.41
CASP4-203ENST00000444739 DEFB131BA0A096LNP1 70 aa6.26□□□□□ -1.41
CASP4-203ENST00000444739 ANK2Q01484 3957 aa6.26□□□□□ -1.41
CASP4-203ENST00000444739 SPTSSBQ8NFR3 76 aa6.25□□□□□ -1.41
CASP4-203ENST00000444739 LINC00472Q9H8W2 130 aa6.25□□□□□ -1.41
CASP4-203ENST00000444739 IGLV7-46A0A075B6I9 117 aa6.25□□□□□ -1.41
CASP4-203ENST00000444739 A6NED7 52 aa6.24□□□□□ -1.41
CASP4-203ENST00000444739 BAHCC1Q9P281 2608 aa6.24□□□□□ -1.41
CASP4-203ENST00000444739 A6NN06 94 aa6.24□□□□□ -1.41
CASP4-203ENST00000444739 ATRQ13535 2644 aa6.23□□□□□ -1.41
CASP4-203ENST00000444739 RBM12B-AS1Q9P1G2 102 aa6.23□□□□□ -1.41
CASP4-203ENST00000444739 MMP24-AS1A0A0U1RRL7 71 aa6.22□□□□□ -1.41
CASP4-203ENST00000444739 CDC42SE1Q9NRR8 79 aa6.21□□□□□ -1.41
CASP4-203ENST00000444739 PHF5AQ7RTV0 110 aaKnown RBP6.21□□□□□ -1.42
CASP4-203ENST00000444739 C11orf45Q8TAV5 145 aa6.21□□□□□ -1.42
CASP4-203ENST00000444739 PLAC8Q9NZF1 115 aa6.21□□□□□ -1.42
CASP4-203ENST00000444739 SRRM2Q9UQ35 2752 aaKnown RBP6.21□□□□□ -1.42
CASP4-203ENST00000444739 NDUFS5O43920 106 aa6.2□□□□□ -1.42
CASP4-203ENST00000444739 SPRR1BP22528 89 aa6.2□□□□□ -1.42
CASP4-203ENST00000444739 TENM2Q9NT68 2774 aa6.2□□□□□ -1.42
CASP4-203ENST00000444739 A0A096LNI7 61 aa6.2□□□□□ -1.42
CASP4-203ENST00000444739 KRTAP10-11P60412 298 aa6.2□□□□□ -1.42
CASP4-203ENST00000444739 LINC01558Q9Y6Z2 57 aa6.19□□□□□ -1.42
CASP4-203ENST00000444739 H0Y9J4 135 aa6.18□□□□□ -1.42
CASP4-203ENST00000444739 PCOTHQ58A44 107 aa6.18□□□□□ -1.42
CASP4-203ENST00000444739 NSD1Q96L73 2696 aaPredicted RBP6.18□□□□□ -1.42
CASP4-203ENST00000444739 IGKV2-24A0A0C4DH68 120 aa6.17□□□□□ -1.42
CASP4-203ENST00000444739 INAFM1C9JVW0 142 aa6.17□□□□□ -1.42
CASP4-203ENST00000444739 ASB16-AS1Q495Z4 193 aa6.17□□□□□ -1.42
CASP4-203ENST00000444739 KRTAP11-1Q8IUC1 163 aa6.17□□□□□ -1.42
CASP4-203ENST00000444739 DNAH10Q8IVF4 4471 aa6.16□□□□□ -1.42
CASP4-203ENST00000444739 SPAG11AQ6PDA7 123 aa6.16□□□□□ -1.42
CASP4-203ENST00000444739 CMYA5Q8N3K9 4069 aa6.16□□□□□ -1.42
CASP4-203ENST00000444739 FASNP49327 2511 aaKnown RBP6.16□□□□□ -1.42
CASP4-203ENST00000444739 MOBPQ13875 183 aa6.16□□□□□ -1.42
CASP4-203ENST00000444739 Q6ZR54 194 aa6.14□□□□□ -1.43
CASP4-203ENST00000444739 C7orf65Q6ZTY9 151 aa6.14□□□□□ -1.43
CASP4-203ENST00000444739 TP53AIP1Q9HCN2 124 aa6.14□□□□□ -1.43
CASP4-203ENST00000444739 HELZ2Q9BYK8 2649 aaKnown RBP6.14□□□□□ -1.43
CASP4-203ENST00000444739 DNAH3Q8TD57 4116 aa6.13□□□□□ -1.43
CASP4-203ENST00000444739 J3QKU1 62 aa6.13□□□□□ -1.43
CASP4-203ENST00000444739 Q96NJ1 140 aa6.13□□□□□ -1.43
CASP4-203ENST00000444739 SPINK7P58062 85 aa6.13□□□□□ -1.43
CASP4-203ENST00000444739 LYSTQ99698 3801 aa6.12□□□□□ -1.43
CASP4-203ENST00000444739 HRES1P13985 223 aa6.12□□□□□ -1.43
CASP4-203ENST00000444739 FLNBO75369 2602 aaKnown RBP6.11□□□□□ -1.43
CASP4-203ENST00000444739 C8orf17Q9NRJ1 99 aa6.1□□□□□ -1.43
CASP4-203ENST00000444739 FBN1P35555 2871 aaKnown RBP6.1□□□□□ -1.43
CASP4-203ENST00000444739 CSMD3Q7Z407 3707 aa6.09□□□□□ -1.43
CASP4-203ENST00000444739 CHTF8P0CG12 524 aa6.09□□□□□ -1.43
CASP4-203ENST00000444739 KRTAP1-5Q9BYS1 174 aa6.07□□□□□ -1.44
CASP4-203ENST00000444739 ALMS1Q8TCU4 4167 aa6.07□□□□□ -1.44
CASP4-203ENST00000444739 DNAH9Q9NYC9 4486 aa6.07□□□□□ -1.44
CASP4-203ENST00000444739 KMT2BQ9UMN6 2715 aaPredicted RBP6.07□□□□□ -1.44
CASP4-203ENST00000444739 KRTAP13-1Q8IUC0 172 aa6.06□□□□□ -1.44
CASP4-203ENST00000444739 MAST4O15021 2626 aa6.06□□□□□ -1.44
CASP4-203ENST00000444739 A0A1B0GVX0 72 aa6.05□□□□□ -1.44
CASP4-203ENST00000444739 IGHV6-1A0A0B4J1U7 121 aa6.04□□□□□ -1.44
CASP4-203ENST00000444739 HUWE1Q7Z6Z7 4374 aaKnown RBP6.04□□□□□ -1.44
CASP4-203ENST00000444739 MRPL34Q9BQ48 92 aaKnown RBP6.03□□□□□ -1.44
CASP4-203ENST00000444739 IGLV9-49A0A0B4J1Y8 123 aa6.03□□□□□ -1.44
CASP4-203ENST00000444739 PRR26Q8N8Z3 221 aa6.02□□□□□ -1.45
CASP4-203ENST00000444739 MDFIQ99750 246 aa6.01□□□□□ -1.45
CASP4-203ENST00000444739 A0A087X002 238 aa6□□□□□ -1.45
CASP4-203ENST00000444739 NOTCH2NLQ7Z3S9 236 aa6□□□□□ -1.45
CASP4-203ENST00000444739 HECTD1Q9ULT8 2610 aa6□□□□□ -1.45
CASP4-203ENST00000444739 COL7A1Q02388 2944 aa6□□□□□ -1.45
CASP4-203ENST00000444739 K7EIL1 84 aa6□□□□□ -1.45
CASP4-203ENST00000444739 C14orf177Q52M58 125 aa6□□□□□ -1.45
CASP4-203ENST00000444739 LINC00313P59037 77 aa5.99□□□□□ -1.45
CASP4-203ENST00000444739 LINC00483Q53H64 154 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms