RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 Q8NBF4 154 aa8.26□□□□□ -1.09
SSBP3-208ENST00000444533 OCIAD2Q56VL3 154 aa8.25□□□□□ -1.09
SSBP3-208ENST00000444533 IGLV5-48A0A075B6I7 105 aa8.24□□□□□ -1.09
SSBP3-208ENST00000444533 A0A1B0GX51 115 aa8.24□□□□□ -1.09
SSBP3-208ENST00000444533 TRIAP1O43715 76 aa8.24□□□□□ -1.09
SSBP3-208ENST00000444533 DNAL4O96015 105 aa8.23□□□□□ -1.09
SSBP3-208ENST00000444533 SCGB1C2P0DMR2 95 aa8.23□□□□□ -1.09
SSBP3-208ENST00000444533 PPDPFLQ8WWR9 84 aa8.23□□□□□ -1.09
SSBP3-208ENST00000444533 SNHG12Q9BXW3 62 aa8.22□□□□□ -1.09
SSBP3-208ENST00000444533 TNXBP22105 4242 aa8.22□□□□□ -1.09
SSBP3-208ENST00000444533 SPINK1P00995 79 aa8.21□□□□□ -1.1
SSBP3-208ENST00000444533 BATFQ16520 125 aa8.2□□□□□ -1.1
SSBP3-208ENST00000444533 Q8N377 158 aa8.2□□□□□ -1.1
SSBP3-208ENST00000444533 H3BQ85 93 aa8.19□□□□□ -1.1
SSBP3-208ENST00000444533 LINC01547P58512 204 aaPredicted RBP8.19□□□□□ -1.1
SSBP3-208ENST00000444533 HERC1Q15751 4861 aa8.19□□□□□ -1.1
SSBP3-208ENST00000444533 PRR4Q16378 134 aa8.17□□□□□ -1.1
SSBP3-208ENST00000444533 LYRM7Q5U5X0 104 aa8.17□□□□□ -1.1
SSBP3-208ENST00000444533 CLEC2BQ92478 149 aa8.17□□□□□ -1.1
SSBP3-208ENST00000444533 FAM218AQ96MZ4 157 aa8.17□□□□□ -1.1
SSBP3-208ENST00000444533 RPS29P62273 56 aaKnown RBP8.15□□□□□ -1.1
SSBP3-208ENST00000444533 LCE2CQ5TA81 110 aa8.15□□□□□ -1.1
SSBP3-208ENST00000444533 SMIM29Q86T20 159 aa8.15□□□□□ -1.1
SSBP3-208ENST00000444533 ORMDL1Q9P0S3 153 aa8.15□□□□□ -1.1
SSBP3-208ENST00000444533 FABP2P12104 132 aa8.14□□□□□ -1.11
SSBP3-208ENST00000444533 Q6JHZ5 121 aa8.14□□□□□ -1.11
SSBP3-208ENST00000444533 LIMD2Q9BT23 127 aa8.14□□□□□ -1.11
SSBP3-208ENST00000444533 CD164Q04900 197 aa8.12□□□□□ -1.11
SSBP3-208ENST00000444533 HRCT1Q6UXD1 115 aa8.12□□□□□ -1.11
SSBP3-208ENST00000444533 TMEM256-PLSCR3K7ERE1 68 aa8.11□□□□□ -1.11
SSBP3-208ENST00000444533 TRACP01848 142 aa8.11□□□□□ -1.11
SSBP3-208ENST00000444533 NDUFV3P56181 108 aaKnown RBP8.1□□□□□ -1.11
SSBP3-208ENST00000444533 ATXN8Q156A1 80 aa8.1□□□□□ -1.11
SSBP3-208ENST00000444533 LST1O00453 97 aa8.09□□□□□ -1.11
SSBP3-208ENST00000444533 IGLV8-61A0A075B6I0 122 aa8.08□□□□□ -1.12
SSBP3-208ENST00000444533 RETNLBQ9BQ08 111 aa8.08□□□□□ -1.12
SSBP3-208ENST00000444533 H3BMG7 143 aa8.07□□□□□ -1.12
SSBP3-208ENST00000444533 FP248Q71RG6 208 aaPredicted RBP8.07□□□□□ -1.12
SSBP3-208ENST00000444533 NAA38Q9BRA0 125 aaKnown RBP8.07□□□□□ -1.12
SSBP3-208ENST00000444533 TRBV20-1A0A075B6N2 111 aa8.06□□□□□ -1.12
SSBP3-208ENST00000444533 H3BUT2 72 aa8.06□□□□□ -1.12
SSBP3-208ENST00000444533 IGLV7-46A0A075B6I9 117 aa8.05□□□□□ -1.12
SSBP3-208ENST00000444533 TCL1BO95988 128 aa8.05□□□□□ -1.12
SSBP3-208ENST00000444533 C9orf118A6NHY6 69 aa8.04□□□□□ -1.12
SSBP3-208ENST00000444533 IGFL1Q6UW32 110 aa8.04□□□□□ -1.12
SSBP3-208ENST00000444533 UBE2V1Q13404 147 aa8.03□□□□□ -1.12
SSBP3-208ENST00000444533 COL5A1-AS1Q5SY13 56 aa8.03□□□□□ -1.12
SSBP3-208ENST00000444533 PCP4L1A6NKN8 68 aa8.02□□□□□ -1.13
SSBP3-208ENST00000444533 BAALC-AS2P0C853 105 aa8.02□□□□□ -1.13
SSBP3-208ENST00000444533 A0A0G2JQZ4 141 aa8.01□□□□□ -1.13
SSBP3-208ENST00000444533 TAX1BP3O14907 124 aa8□□□□□ -1.13
SSBP3-208ENST00000444533 Q5XG85 94 aa8□□□□□ -1.13
SSBP3-208ENST00000444533 ANKRD29Q8N6D5 301 aa8□□□□□ -1.13
SSBP3-208ENST00000444533 TRBV7-7A0A0K0K1E9 115 aa7.99□□□□□ -1.13
SSBP3-208ENST00000444533 A0A1W2PPM0 123 aa7.99□□□□□ -1.13
SSBP3-208ENST00000444533 TEN1Q86WV5 123 aa7.99□□□□□ -1.13
SSBP3-208ENST00000444533 A0A1B0GV72 72 aa7.98□□□□□ -1.13
SSBP3-208ENST00000444533 DSCR8Q96T75 97 aa7.98□□□□□ -1.13
SSBP3-208ENST00000444533 SS18L2Q9UHA2 77 aa7.98□□□□□ -1.13
SSBP3-208ENST00000444533 RBM3P98179 157 aaKnown RBP7.97□□□□□ -1.13
SSBP3-208ENST00000444533 TPRXLQ17RH7 258 aa7.97□□□□□ -1.13
SSBP3-208ENST00000444533 CDIP1Q9H305 208 aa7.97□□□□□ -1.13
SSBP3-208ENST00000444533 HMCN2Q8NDA2 5059 aa7.96□□□□□ -1.13
SSBP3-208ENST00000444533 LORP23490 312 aaPredicted RBP7.96□□□□□ -1.14
SSBP3-208ENST00000444533 Q6Q795 121 aa7.96□□□□□ -1.14
SSBP3-208ENST00000444533 C9JAW5 83 aa7.95□□□□□ -1.14
SSBP3-208ENST00000444533 JMJD7-PLA2G4BH0Y9G9 81 aa7.95□□□□□ -1.14
SSBP3-208ENST00000444533 SPCS1Q9Y6A9 102 aa7.93□□□□□ -1.14
SSBP3-208ENST00000444533 CCKP06307 115 aa7.92□□□□□ -1.14
SSBP3-208ENST00000444533 ASB16-AS1Q495Z4 193 aa7.92□□□□□ -1.14
SSBP3-208ENST00000444533 A0A087WSZ3 146 aa7.91□□□□□ -1.14
SSBP3-208ENST00000444533 TRBV7-4A0A0J9YYF1 115 aa7.91□□□□□ -1.14
SSBP3-208ENST00000444533 C1orf195Q5TG92 126 aa7.91□□□□□ -1.14
SSBP3-208ENST00000444533 VPS25Q9BRG1 176 aa7.91□□□□□ -1.14
SSBP3-208ENST00000444533 C21orf62-AS1Q17RA5 79 aa7.9□□□□□ -1.14
SSBP3-208ENST00000444533 H3BT86 120 aa7.89□□□□□ -1.15
SSBP3-208ENST00000444533 PDE6GP18545 87 aa7.89□□□□□ -1.15
SSBP3-208ENST00000444533 A0A1W2PNM2 257 aa7.87□□□□□ -1.15
SSBP3-208ENST00000444533 KRTAP13-3Q3SY46 172 aa7.87□□□□□ -1.15
SSBP3-208ENST00000444533 GTF2H5Q6ZYL4 71 aa7.86□□□□□ -1.15
SSBP3-208ENST00000444533 LOC110117498A0A087WWA1 95 aa7.83□□□□□ -1.16
SSBP3-208ENST00000444533 MTURNQ8N3F0 131 aa7.83□□□□□ -1.16
SSBP3-208ENST00000444533 LRP2P98164 4655 aa7.82□□□□□ -1.16
SSBP3-208ENST00000444533 A0A1B0GW54 56 aa7.82□□□□□ -1.16
SSBP3-208ENST00000444533 K7EP34 96 aa7.82□□□□□ -1.16
SSBP3-208ENST00000444533 C14orf132Q9NPU4 83 aa7.82□□□□□ -1.16
SSBP3-208ENST00000444533 C9orf92A6NGG3 77 aa7.81□□□□□ -1.16
SSBP3-208ENST00000444533 Q6ZQT0 140 aa7.8□□□□□ -1.16
SSBP3-208ENST00000444533 LPAP08519 4548 aa7.79□□□□□ -1.16
SSBP3-208ENST00000444533 SIGMAR1Q99720 223 aa7.79□□□□□ -1.16
SSBP3-208ENST00000444533 OBSCN-AS1Q96MR7 158 aa7.78□□□□□ -1.16
SSBP3-208ENST00000444533 IGKV4-1P06312 121 aa7.77□□□□□ -1.17
SSBP3-208ENST00000444533 SEC61BP60468 96 aaKnown RBP7.77□□□□□ -1.17
SSBP3-208ENST00000444533 XP32Q5T750 250 aa7.75□□□□□ -1.17
SSBP3-208ENST00000444533 J3KT08 172 aa7.74□□□□□ -1.17
SSBP3-208ENST00000444533 F8W1H4 67 aa7.73□□□□□ -1.17
SSBP3-208ENST00000444533 Q96NJ1 140 aa7.73□□□□□ -1.17
SSBP3-208ENST00000444533 NREPQ16612 68 aa7.71□□□□□ -1.18
SSBP3-208ENST00000444533 LINC00472Q9H8W2 130 aa7.71□□□□□ -1.18
SSBP3-208ENST00000444533 NDUFB1O75438 58 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms