RNA–Protein interactions for RNA: ENST00000444469.3

TMEM238-201, Transcript of transmembrane protein 238, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM238, Length 1,000 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238-201ENST00000444469 CFC1BP0CG36 223 aa12.71□□□□□ -0.37
TMEM238-201ENST00000444469 S100A6P06703 90 aa12.7□□□□□ -0.38
TMEM238-201ENST00000444469 CLEC2BQ92478 149 aa12.69□□□□□ -0.38
TMEM238-201ENST00000444469 MT1HP80294 61 aa12.67□□□□□ -0.38
TMEM238-201ENST00000444469 BVES-AS1Q5T3Y7 98 aa12.67□□□□□ -0.38
TMEM238-201ENST00000444469 HIST1H4GQ99525 98 aa12.67□□□□□ -0.38
TMEM238-201ENST00000444469 KRTAP19-2Q3LHN2 52 aa12.66□□□□□ -0.38
TMEM238-201ENST00000444469 OCIAD2Q56VL3 154 aa12.65□□□□□ -0.38
TMEM238-201ENST00000444469 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.65□□□□□ -0.38
TMEM238-201ENST00000444469 COX6B2Q6YFQ2 88 aa12.65□□□□□ -0.38
TMEM238-201ENST00000444469 TRBV7-7A0A0K0K1E9 115 aa12.64□□□□□ -0.39
TMEM238-201ENST00000444469 C12orf57Q99622 126 aa12.64□□□□□ -0.39
TMEM238-201ENST00000444469 SNHG12Q9BXW3 62 aa12.64□□□□□ -0.39
TMEM238-201ENST00000444469 IGFL1Q6UW32 110 aa12.63□□□□□ -0.39
TMEM238-201ENST00000444469 PPDPFLQ8WWR9 84 aa12.63□□□□□ -0.39
TMEM238-201ENST00000444469 SCGB1D1O95968 90 aa12.62□□□□□ -0.39
TMEM238-201ENST00000444469 M0R2T5 61 aa12.61□□□□□ -0.39
TMEM238-201ENST00000444469 SNCGO76070 127 aa12.6□□□□□ -0.39
TMEM238-201ENST00000444469 LST1O00453 97 aa12.54□□□□□ -0.4
TMEM238-201ENST00000444469 COX8AP10176 69 aa12.54□□□□□ -0.4
TMEM238-201ENST00000444469 ATP11AUNQ6ZP68 121 aa12.54□□□□□ -0.4
TMEM238-201ENST00000444469 RAB37Q96AX2 223 aa12.54□□□□□ -0.4
TMEM238-201ENST00000444469 S100A1P23297 94 aa12.53□□□□□ -0.4
TMEM238-201ENST00000444469 OBSCN-AS1Q96MR7 158 aa12.53□□□□□ -0.4
TMEM238-201ENST00000444469 H3BUT2 72 aa12.52□□□□□ -0.41
TMEM238-201ENST00000444469 SS18L2Q9UHA2 77 aa12.51□□□□□ -0.41
TMEM238-201ENST00000444469 CRCT1Q9UGL9 99 aa12.5□□□□□ -0.41
TMEM238-201ENST00000444469 DLEU1O43261 78 aa12.48□□□□□ -0.41
TMEM238-201ENST00000444469 H0YGX0 51 aa12.47□□□□□ -0.41
TMEM238-201ENST00000444469 KRTAP10-6P60371 365 aaPredicted RBP12.46□□□□□ -0.41
TMEM238-201ENST00000444469 Q75L30 129 aa12.46□□□□□ -0.41
TMEM238-201ENST00000444469 CFC1P0CG37 223 aa12.45□□□□□ -0.42
TMEM238-201ENST00000444469 GHRHP01286 108 aa12.44□□□□□ -0.42
TMEM238-201ENST00000444469 Q6Q795 121 aa12.44□□□□□ -0.42
TMEM238-201ENST00000444469 LORP23490 312 aaPredicted RBP12.43□□□□□ -0.42
TMEM238-201ENST00000444469 C14orf144Q96I85 54 aa12.43□□□□□ -0.42
TMEM238-201ENST00000444469 Q96NJ1 140 aa12.43□□□□□ -0.42
TMEM238-201ENST00000444469 A0A0B4J2C4 111 aa12.41□□□□□ -0.42
TMEM238-201ENST00000444469 NDUFV3P56181 108 aaKnown RBP12.41□□□□□ -0.42
TMEM238-201ENST00000444469 TEN1Q86WV5 123 aa12.41□□□□□ -0.42
TMEM238-201ENST00000444469 FSIP2Q5CZC0 6907 aa12.4□□□□□ -0.42
TMEM238-201ENST00000444469 HIGD1BQ9P298 99 aa12.4□□□□□ -0.42
TMEM238-201ENST00000444469 PAM16Q9Y3D7 125 aa12.4□□□□□ -0.42
TMEM238-201ENST00000444469 SPATA45Q537H7 98 aa12.39□□□□□ -0.43
TMEM238-201ENST00000444469 TMEM238LA0A1B0GVL6 79 aa12.36□□□□□ -0.43
TMEM238-201ENST00000444469 A6NJY4 79 aa12.36□□□□□ -0.43
TMEM238-201ENST00000444469 FABP2P12104 132 aa12.36□□□□□ -0.43
TMEM238-201ENST00000444469 VAMP8Q9BV40 100 aa12.36□□□□□ -0.43
TMEM238-201ENST00000444469 A0A087WSZ3 146 aa12.35□□□□□ -0.43
TMEM238-201ENST00000444469 H3BMG7 143 aa12.34□□□□□ -0.43
TMEM238-201ENST00000444469 FAM218AQ96MZ4 157 aa12.34□□□□□ -0.43
TMEM238-201ENST00000444469 A0A1B0GX51 115 aa12.33□□□□□ -0.44
TMEM238-201ENST00000444469 PRO1854Q9UHT4 67 aa12.32□□□□□ -0.44
TMEM238-201ENST00000444469 CEND1Q8N111 149 aa12.3□□□□□ -0.44
TMEM238-201ENST00000444469 C2orf91Q6ZV80 131 aa12.28□□□□□ -0.44
TMEM238-201ENST00000444469 TRBV20-1A0A075B6N2 111 aa12.27□□□□□ -0.45
TMEM238-201ENST00000444469 C20orf166-AS1Q96NR2 134 aa12.27□□□□□ -0.45
TMEM238-201ENST00000444469 SIGMAR1Q99720 223 aa12.27□□□□□ -0.45
TMEM238-201ENST00000444469 DNAL4O96015 105 aa12.26□□□□□ -0.45
TMEM238-201ENST00000444469 A8MUU9 505 aa12.24□□□□□ -0.45
TMEM238-201ENST00000444469 DSCR10P59022 87 aa12.22□□□□□ -0.45
TMEM238-201ENST00000444469 TRIAP1O43715 76 aa12.21□□□□□ -0.45
TMEM238-201ENST00000444469 H3BQ85 93 aa12.2□□□□□ -0.46
TMEM238-201ENST00000444469 PSMB2P49721 201 aa12.2□□□□□ -0.46
TMEM238-201ENST00000444469 ANKRD29Q8N6D5 301 aa12.2□□□□□ -0.46
TMEM238-201ENST00000444469 FXYD2P54710 66 aa12.19□□□□□ -0.46
TMEM238-201ENST00000444469 ORMDL1Q9P0S3 153 aa12.19□□□□□ -0.46
TMEM238-201ENST00000444469 A0A1W2PNM2 257 aa12.17□□□□□ -0.46
TMEM238-201ENST00000444469 A0A1B0GV72 72 aa12.16□□□□□ -0.46
TMEM238-201ENST00000444469 IGKV4-1P06312 121 aa12.16□□□□□ -0.46
TMEM238-201ENST00000444469 LINC00313P59037 77 aa12.16□□□□□ -0.46
TMEM238-201ENST00000444469 COX6CP09669 75 aa12.15□□□□□ -0.46
TMEM238-201ENST00000444469 TRBV7-4A0A0J9YYF1 115 aa12.14□□□□□ -0.47
TMEM238-201ENST00000444469 FLGP20930 4061 aaPredicted RBP12.14□□□□□ -0.47
TMEM238-201ENST00000444469 TMEM256-PLSCR3K7ERE1 68 aa12.12□□□□□ -0.47
TMEM238-201ENST00000444469 HSD52Q0P140 79 aa12.12□□□□□ -0.47
TMEM238-201ENST00000444469 FAM236DA0A1B0GTK5 79 aa12.09□□□□□ -0.47
TMEM238-201ENST00000444469 TRACP01848 142 aa12.09□□□□□ -0.47
TMEM238-201ENST00000444469 FAM236CP0DP71 79 aa12.09□□□□□ -0.47
TMEM238-201ENST00000444469 CCKP06307 115 aa12.07□□□□□ -0.48
TMEM238-201ENST00000444469 K7ERJ3 54 aa12.06□□□□□ -0.48
TMEM238-201ENST00000444469 DEFB116Q30KQ4 102 aa12.03□□□□□ -0.48
TMEM238-201ENST00000444469 IGHV6-1A0A0B4J1U7 121 aa12.01□□□□□ -0.49
TMEM238-201ENST00000444469 VPS25Q9BRG1 176 aa12.01□□□□□ -0.49
TMEM238-201ENST00000444469 RBM12B-AS1Q9P1G2 102 aa12.01□□□□□ -0.49
TMEM238-201ENST00000444469 UBE2V1Q13404 147 aa12□□□□□ -0.49
TMEM238-201ENST00000444469 KRTAP16-1A8MUX0 517 aa11.98□□□□□ -0.49
TMEM238-201ENST00000444469 LINC00472Q9H8W2 130 aa11.98□□□□□ -0.49
TMEM238-201ENST00000444469 SCGB1C2P0DMR2 95 aa11.97□□□□□ -0.49
TMEM238-201ENST00000444469 PYY3Q5JQD4 70 aa11.97□□□□□ -0.49
TMEM238-201ENST00000444469 DSCR8Q96T75 97 aa11.95□□□□□ -0.5
TMEM238-201ENST00000444469 UQCR10Q9UDW1 63 aa11.95□□□□□ -0.5
TMEM238-201ENST00000444469 RBM3P98179 157 aaKnown RBP11.94□□□□□ -0.5
TMEM238-201ENST00000444469 NOTCH2NLQ7Z3S9 236 aa11.94□□□□□ -0.5
TMEM238-201ENST00000444469 C8orf87E5RJ46 101 aa11.93□□□□□ -0.5
TMEM238-201ENST00000444469 KRTAP9-8Q9BYQ0 159 aa11.91□□□□□ -0.5
TMEM238-201ENST00000444469 C21orf62-AS1Q17RA5 79 aa11.9□□□□□ -0.5
TMEM238-201ENST00000444469 A0A1B0GVX0 72 aa11.89□□□□□ -0.51
TMEM238-201ENST00000444469 MTURNQ8N3F0 131 aa11.86□□□□□ -0.51
TMEM238-201ENST00000444469 C9JAW5 83 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms