RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 A0A0B4J2C4 111 aa6.03□□□□□ -1.44
SF3A1-203ENST00000444440 LINC01547P58512 204 aaPredicted RBP6.03□□□□□ -1.44
SF3A1-203ENST00000444440 CD164Q04900 197 aa6.03□□□□□ -1.44
SF3A1-203ENST00000444440 LIMD2Q9BT23 127 aa6.03□□□□□ -1.44
SF3A1-203ENST00000444440 A0A0U1RQV1 116 aa6.02□□□□□ -1.45
SF3A1-203ENST00000444440 F8WEM9 126 aa6.02□□□□□ -1.45
SF3A1-203ENST00000444440 H0YGX0 51 aa6.02□□□□□ -1.45
SF3A1-203ENST00000444440 ASB16-AS1Q495Z4 193 aa6.02□□□□□ -1.45
SF3A1-203ENST00000444440 HRCT1Q6UXD1 115 aa6.02□□□□□ -1.45
SF3A1-203ENST00000444440 SMIM29Q86T20 159 aa6.02□□□□□ -1.45
SF3A1-203ENST00000444440 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.01□□□□□ -1.45
SF3A1-203ENST00000444440 Q6ZQY7 126 aa6.01□□□□□ -1.45
SF3A1-203ENST00000444440 PRO1854Q9UHT4 67 aa6.01□□□□□ -1.45
SF3A1-203ENST00000444440 A0A0G2JQZ4 141 aa6□□□□□ -1.45
SF3A1-203ENST00000444440 PPDPFLQ8WWR9 84 aa6□□□□□ -1.45
SF3A1-203ENST00000444440 HSD52Q0P140 79 aa5.99□□□□□ -1.45
SF3A1-203ENST00000444440 OCIAD2Q56VL3 154 aa5.99□□□□□ -1.45
SF3A1-203ENST00000444440 XP32Q5T750 250 aa5.99□□□□□ -1.45
SF3A1-203ENST00000444440 SNHG12Q9BXW3 62 aa5.99□□□□□ -1.45
SF3A1-203ENST00000444440 UQCR10Q9UDW1 63 aa5.99□□□□□ -1.45
SF3A1-203ENST00000444440 GHRHP01286 108 aa5.98□□□□□ -1.45
SF3A1-203ENST00000444440 FXYD2P54710 66 aa5.97□□□□□ -1.45
SF3A1-203ENST00000444440 Q6JHZ5 121 aa5.97□□□□□ -1.45
SF3A1-203ENST00000444440 A0A1B0GX51 115 aa5.95□□□□□ -1.46
SF3A1-203ENST00000444440 Q5XG85 94 aa5.95□□□□□ -1.46
SF3A1-203ENST00000444440 IGLV8-61A0A075B6I0 122 aa5.94□□□□□ -1.46
SF3A1-203ENST00000444440 TCL1BO95988 128 aa5.94□□□□□ -1.46
SF3A1-203ENST00000444440 COX6CP09669 75 aa5.94□□□□□ -1.46
SF3A1-203ENST00000444440 PSMB2P49721 201 aa5.94□□□□□ -1.46
SF3A1-203ENST00000444440 SEC61BP60468 96 aaKnown RBP5.94□□□□□ -1.46
SF3A1-203ENST00000444440 KRTAP9-2Q9BYQ4 174 aa5.94□□□□□ -1.46
SF3A1-203ENST00000444440 C9orf92A6NGG3 77 aa5.93□□□□□ -1.46
SF3A1-203ENST00000444440 CLEC2BQ92478 149 aa5.92□□□□□ -1.46
SF3A1-203ENST00000444440 H3BQ85 93 aa5.91□□□□□ -1.46
SF3A1-203ENST00000444440 TRIAP1O43715 76 aa5.91□□□□□ -1.46
SF3A1-203ENST00000444440 C1orf195Q5TG92 126 aa5.91□□□□□ -1.46
SF3A1-203ENST00000444440 FAM218AQ96MZ4 157 aa5.91□□□□□ -1.46
SF3A1-203ENST00000444440 DNAL4O96015 105 aa5.9□□□□□ -1.46
SF3A1-203ENST00000444440 KRTAP19-2Q3LHN2 52 aa5.9□□□□□ -1.46
SF3A1-203ENST00000444440 IGFL1Q6UW32 110 aa5.9□□□□□ -1.46
SF3A1-203ENST00000444440 FABP2P12104 132 aa5.89□□□□□ -1.47
SF3A1-203ENST00000444440 NDUFV3P56181 108 aaKnown RBP5.89□□□□□ -1.47
SF3A1-203ENST00000444440 LCE2CQ5TA81 110 aa5.89□□□□□ -1.47
SF3A1-203ENST00000444440 TRBV7-7A0A0K0K1E9 115 aa5.88□□□□□ -1.47
SF3A1-203ENST00000444440 K7ERJ3 54 aa5.88□□□□□ -1.47
SF3A1-203ENST00000444440 SMIM6P0DI80 62 aa5.88□□□□□ -1.47
SF3A1-203ENST00000444440 PCOTHQ58A44 107 aa5.88□□□□□ -1.47
SF3A1-203ENST00000444440 H3BUT2 72 aa5.87□□□□□ -1.47
SF3A1-203ENST00000444440 SCGB1C2P0DMR2 95 aa5.87□□□□□ -1.47
SF3A1-203ENST00000444440 ORMDL1Q9P0S3 153 aa5.87□□□□□ -1.47
SF3A1-203ENST00000444440 H3BMG7 143 aa5.86□□□□□ -1.47
SF3A1-203ENST00000444440 TMEM256-PLSCR3K7ERE1 68 aa5.86□□□□□ -1.47
SF3A1-203ENST00000444440 M0R143 59 aa5.86□□□□□ -1.47
SF3A1-203ENST00000444440 TEN1Q86WV5 123 aa5.85□□□□□ -1.47
SF3A1-203ENST00000444440 FLGP20930 4061 aaPredicted RBP5.84□□□□□ -1.47
SF3A1-203ENST00000444440 SS18L2Q9UHA2 77 aa5.84□□□□□ -1.47
SF3A1-203ENST00000444440 LST1O00453 97 aa5.83□□□□□ -1.48
SF3A1-203ENST00000444440 Q6Q795 121 aa5.83□□□□□ -1.48
SF3A1-203ENST00000444440 TSTD3H0UI37 97 aa5.82□□□□□ -1.48
SF3A1-203ENST00000444440 TRACP01848 142 aa5.82□□□□□ -1.48
SF3A1-203ENST00000444440 ANKRD29Q8N6D5 301 aa5.81□□□□□ -1.48
SF3A1-203ENST00000444440 RPL37P61927 97 aaKnown RBP5.8□□□□□ -1.48
SF3A1-203ENST00000444440 UBE2V1Q13404 147 aa5.8□□□□□ -1.48
SF3A1-203ENST00000444440 MT1HP80294 61 aa5.79□□□□□ -1.48
SF3A1-203ENST00000444440 A0A087WSZ3 146 aa5.77□□□□□ -1.49
SF3A1-203ENST00000444440 LOC105371267A0A1B0GV96 52 aa5.77□□□□□ -1.49
SF3A1-203ENST00000444440 BAALC-AS2P0C853 105 aa5.77□□□□□ -1.49
SF3A1-203ENST00000444440 TRBV7-4A0A0J9YYF1 115 aa5.76□□□□□ -1.49
SF3A1-203ENST00000444440 RBM3P98179 157 aaKnown RBP5.76□□□□□ -1.49
SF3A1-203ENST00000444440 ATXN8Q156A1 80 aa5.76□□□□□ -1.49
SF3A1-203ENST00000444440 LYRM7Q5U5X0 104 aa5.76□□□□□ -1.49
SF3A1-203ENST00000444440 A0A1B0GV72 72 aa5.75□□□□□ -1.49
SF3A1-203ENST00000444440 A0A1W2PNM2 257 aa5.75□□□□□ -1.49
SF3A1-203ENST00000444440 DSCR8Q96T75 97 aa5.75□□□□□ -1.49
SF3A1-203ENST00000444440 CCKP06307 115 aa5.74□□□□□ -1.49
SF3A1-203ENST00000444440 KRTAP9-6A0A140TA67 174 aa5.73□□□□□ -1.49
SF3A1-203ENST00000444440 BATFQ16520 125 aa5.73□□□□□ -1.49
SF3A1-203ENST00000444440 TRBV20-1A0A075B6N2 111 aa5.72□□□□□ -1.49
SF3A1-203ENST00000444440 C21orf62-AS1Q17RA5 79 aa5.72□□□□□ -1.49
SF3A1-203ENST00000444440 LCE2DQ5TA82 110 aaPredicted RBP5.72□□□□□ -1.49
SF3A1-203ENST00000444440 OBSCN-AS1Q96MR7 158 aa5.72□□□□□ -1.49
SF3A1-203ENST00000444440 NAA38Q9BRA0 125 aaKnown RBP5.72□□□□□ -1.49
SF3A1-203ENST00000444440 C9JAW5 83 aa5.71□□□□□ -1.5
SF3A1-203ENST00000444440 Q96NJ1 140 aa5.71□□□□□ -1.5
SF3A1-203ENST00000444440 JMJD7-PLA2G4BH0Y9G9 81 aa5.7□□□□□ -1.5
SF3A1-203ENST00000444440 VPS25Q9BRG1 176 aa5.7□□□□□ -1.5
SF3A1-203ENST00000444440 IGKV4-1P06312 121 aa5.69□□□□□ -1.5
SF3A1-203ENST00000444440 ATP11AUNQ6ZP68 121 aa5.69□□□□□ -1.5
SF3A1-203ENST00000444440 SIGMAR1Q99720 223 aa5.69□□□□□ -1.5
SF3A1-203ENST00000444440 LORP23490 312 aaPredicted RBP5.68□□□□□ -1.5
SF3A1-203ENST00000444440 KRTAP10-6P60371 365 aaPredicted RBP5.68□□□□□ -1.5
SF3A1-203ENST00000444440 Q75L30 129 aa5.68□□□□□ -1.5
SF3A1-203ENST00000444440 C9orf118A6NHY6 69 aa5.67□□□□□ -1.5
SF3A1-203ENST00000444440 PDE6GP18545 87 aa5.67□□□□□ -1.5
SF3A1-203ENST00000444440 LINC00313P59037 77 aa5.66□□□□□ -1.5
SF3A1-203ENST00000444440 LINC00472Q9H8W2 130 aa5.66□□□□□ -1.5
SF3A1-203ENST00000444440 FSIP2Q5CZC0 6907 aa5.66□□□□□ -1.5
SF3A1-203ENST00000444440 A0A1B0GW54 56 aa5.65□□□□□ -1.5
SF3A1-203ENST00000444440 LOC110117498A0A087WWA1 95 aa5.64□□□□□ -1.51
SF3A1-203ENST00000444440 A0A1W2PPM0 123 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms