RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 Q6ZRX8 168 aa9.06□□□□□ -0.96
MCF2L-218ENST00000442625 KRTAP7-1Q8IUC3 87 aa9.06□□□□□ -0.96
MCF2L-218ENST00000442625 LCE2DQ5TA82 110 aaPredicted RBP9.06□□□□□ -0.96
MCF2L-218ENST00000442625 ETDCA0A1B0GVM5 59 aa9.05□□□□□ -0.96
MCF2L-218ENST00000442625 DSCR10P59022 87 aa9.05□□□□□ -0.96
MCF2L-218ENST00000442625 MP68P56378 58 aa9.04□□□□□ -0.96
MCF2L-218ENST00000442625 LINC01554Q52M75 96 aa9.04□□□□□ -0.96
MCF2L-218ENST00000442625 STAB1Q9NY15 2570 aa9.04□□□□□ -0.96
MCF2L-218ENST00000442625 KRTAP4-16G5E9R7 235 aaPredicted RBP9.03□□□□□ -0.96
MCF2L-218ENST00000442625 IGLV1-50A0A075B6I6 118 aa9.02□□□□□ -0.97
MCF2L-218ENST00000442625 HCG22E2RYF7 251 aa9.02□□□□□ -0.97
MCF2L-218ENST00000442625 TNP2Q05952 138 aa9.02□□□□□ -0.97
MCF2L-218ENST00000442625 Q8NBF4 154 aa9.02□□□□□ -0.97
MCF2L-218ENST00000442625 DNAH10OSP0CZ25 163 aa9□□□□□ -0.97
MCF2L-218ENST00000442625 C1orf64Q8NEQ6 169 aa9□□□□□ -0.97
MCF2L-218ENST00000442625 DHRS4-AS1Q9P1J3 65 aa9□□□□□ -0.97
MCF2L-218ENST00000442625 COL6A5A8TX70 2615 aa8.99□□□□□ -0.97
MCF2L-218ENST00000442625 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.99□□□□□ -0.97
MCF2L-218ENST00000442625 Q5VV11 94 aa8.99□□□□□ -0.97
MCF2L-218ENST00000442625 DNAH10Q8IVF4 4471 aa8.98□□□□□ -0.97
MCF2L-218ENST00000442625 LYSTQ99698 3801 aa8.98□□□□□ -0.97
MCF2L-218ENST00000442625 WFDC13Q8IUB5 93 aa8.98□□□□□ -0.97
MCF2L-218ENST00000442625 CHKB-CPT1BH3BT56 60 aa8.97□□□□□ -0.97
MCF2L-218ENST00000442625 TLX1NBP0CAT3 122 aa8.97□□□□□ -0.97
MCF2L-218ENST00000442625 RPL37AP61513 92 aaKnown RBP8.96□□□□□ -0.98
MCF2L-218ENST00000442625 LINC00476Q8WZB0 136 aa8.96□□□□□ -0.98
MCF2L-218ENST00000442625 CMYA5Q8N3K9 4069 aa8.96□□□□□ -0.98
MCF2L-218ENST00000442625 SPRR1AP35321 89 aa8.96□□□□□ -0.98
MCF2L-218ENST00000442625 SPRR4Q96PI1 79 aa8.95□□□□□ -0.98
MCF2L-218ENST00000442625 H0Y9J4 135 aa8.95□□□□□ -0.98
MCF2L-218ENST00000442625 PSCAO43653 123 aa8.95□□□□□ -0.98
MCF2L-218ENST00000442625 LCE6AA0A183 80 aa8.94□□□□□ -0.98
MCF2L-218ENST00000442625 PRLHP81277 87 aa8.94□□□□□ -0.98
MCF2L-218ENST00000442625 ZCCHC13Q8WW36 166 aaKnown RBP8.94□□□□□ -0.98
MCF2L-218ENST00000442625 PLA2G2DQ9UNK4 145 aa8.94□□□□□ -0.98
MCF2L-218ENST00000442625 NBEAL1Q6ZS30 2694 aa8.93□□□□□ -0.98
MCF2L-218ENST00000442625 ZNF706Q9Y5V0 76 aaPredicted RBP8.93□□□□□ -0.98
MCF2L-218ENST00000442625 COL7A1Q02388 2944 aa8.92□□□□□ -0.98
MCF2L-218ENST00000442625 DNAH1Q9P2D7 4330 aa8.92□□□□□ -0.98
MCF2L-218ENST00000442625 IGLV5-37A0A075B6J1 123 aa8.92□□□□□ -0.98
MCF2L-218ENST00000442625 KRTAP24-1Q3LI83 254 aa8.92□□□□□ -0.98
MCF2L-218ENST00000442625 IGFL1Q6UW32 110 aa8.92□□□□□ -0.98
MCF2L-218ENST00000442625 A0A087WSZ3 146 aa8.91□□□□□ -0.98
MCF2L-218ENST00000442625 IGKV2-24A0A0C4DH68 120 aa8.91□□□□□ -0.98
MCF2L-218ENST00000442625 REG3GQ6UW15 175 aa8.89□□□□□ -0.99
MCF2L-218ENST00000442625 KRTAP3-3Q9BYR6 98 aa8.89□□□□□ -0.99
MCF2L-218ENST00000442625 KRTAP3-2Q9BYR7 98 aa8.89□□□□□ -0.99
MCF2L-218ENST00000442625 LINC00208Q96KT6 92 aa8.87□□□□□ -0.99
MCF2L-218ENST00000442625 CYP4F30PQ9H0H9 118 aa8.86□□□□□ -0.99
MCF2L-218ENST00000442625 A0A096LNI7 61 aa8.85□□□□□ -0.99
MCF2L-218ENST00000442625 TENM2Q9NT68 2774 aa8.85□□□□□ -0.99
MCF2L-218ENST00000442625 A0A1B0GW54 56 aa8.85□□□□□ -0.99
MCF2L-218ENST00000442625 DNAH3Q8TD57 4116 aa8.84□□□□□ -0.99
MCF2L-218ENST00000442625 A6NED7 52 aa8.83□□□□□ -1
MCF2L-218ENST00000442625 CDC42SE1Q9NRR8 79 aa8.83□□□□□ -1
MCF2L-218ENST00000442625 KRTAP11-1Q8IUC1 163 aa8.82□□□□□ -1
MCF2L-218ENST00000442625 LIMD2Q9BT23 127 aa8.82□□□□□ -1
MCF2L-218ENST00000442625 KRTAP1-5Q9BYS1 174 aa8.82□□□□□ -1
MCF2L-218ENST00000442625 DNAH9Q9NYC9 4486 aa8.81□□□□□ -1
MCF2L-218ENST00000442625 MOBPQ13875 183 aa8.81□□□□□ -1
MCF2L-218ENST00000442625 PRAC1Q96KF2 57 aa8.81□□□□□ -1
MCF2L-218ENST00000442625 CHTF8P0CG12 524 aa8.8□□□□□ -1
MCF2L-218ENST00000442625 PRR15LQ9BU68 103 aa8.79□□□□□ -1
MCF2L-218ENST00000442625 HUWE1Q7Z6Z7 4374 aaKnown RBP8.78□□□□□ -1
MCF2L-218ENST00000442625 Q75L30 129 aa8.78□□□□□ -1
MCF2L-218ENST00000442625 H0Y9P7 68 aa8.77□□□□□ -1.01
MCF2L-218ENST00000442625 CNBPP62633 177 aaKnown RBP8.76□□□□□ -1.01
MCF2L-218ENST00000442625 CASC2Q6XLA1 102 aa8.76□□□□□ -1.01
MCF2L-218ENST00000442625 B9D2Q9BPU9 175 aa8.76□□□□□ -1.01
MCF2L-218ENST00000442625 STAB2Q8WWQ8 2551 aa8.76□□□□□ -1.01
MCF2L-218ENST00000442625 KRTAP29-1A8MX34 341 aaPredicted RBP8.76□□□□□ -1.01
MCF2L-218ENST00000442625 K7EIL1 84 aa8.75□□□□□ -1.01
MCF2L-218ENST00000442625 IGHV6-1A0A0B4J1U7 121 aa8.72□□□□□ -1.01
MCF2L-218ENST00000442625 NDUFB1O75438 58 aa8.72□□□□□ -1.01
MCF2L-218ENST00000442625 Q8N9P0 234 aaPredicted RBP8.72□□□□□ -1.01
MCF2L-218ENST00000442625 RETNLBQ9BQ08 111 aa8.71□□□□□ -1.01
MCF2L-218ENST00000442625 MGAM2Q2M2H8 2515 aa8.71□□□□□ -1.01
MCF2L-218ENST00000442625 DNAH7Q8WXX0 4024 aa8.7□□□□□ -1.02
MCF2L-218ENST00000442625 IGLV8-61A0A075B6I0 122 aa8.69□□□□□ -1.02
MCF2L-218ENST00000442625 UBE2DNLQ8IWF7 75 aa8.68□□□□□ -1.02
MCF2L-218ENST00000442625 PCOTHQ58A44 107 aa8.68□□□□□ -1.02
MCF2L-218ENST00000442625 LINC00472Q9H8W2 130 aa8.67□□□□□ -1.02
MCF2L-218ENST00000442625 A8MWP4 228 aa8.67□□□□□ -1.02
MCF2L-218ENST00000442625 LOC101927531A0A1B0GV80 90 aa8.65□□□□□ -1.03
MCF2L-218ENST00000442625 PLA2G1BP04054 148 aaKnown RBP8.65□□□□□ -1.03
MCF2L-218ENST00000442625 PANO1I0J062 215 aa8.64□□□□□ -1.03
MCF2L-218ENST00000442625 ADM2Q7Z4H4 148 aa8.63□□□□□ -1.03
MCF2L-218ENST00000442625 C9orf163Q8N9P6 203 aa8.63□□□□□ -1.03
MCF2L-218ENST00000442625 IGLV9-49A0A0B4J1Y8 123 aa8.62□□□□□ -1.03
MCF2L-218ENST00000442625 MMP24-AS1A0A0U1RRL7 71 aa8.62□□□□□ -1.03
MCF2L-218ENST00000442625 COA5Q86WW8 74 aa8.6□□□□□ -1.03
MCF2L-218ENST00000442625 SPANXA2-OT1Q8N9U9 137 aa8.6□□□□□ -1.03
MCF2L-218ENST00000442625 SPRR1BP22528 89 aa8.59□□□□□ -1.03
MCF2L-218ENST00000442625 APLNQ9ULZ1 77 aa8.59□□□□□ -1.03
MCF2L-218ENST00000442625 ASB16-AS1Q495Z4 193 aa8.58□□□□□ -1.04
MCF2L-218ENST00000442625 FRAS1Q86XX4 4008 aa8.57□□□□□ -1.04
MCF2L-218ENST00000442625 C14orf177Q52M58 125 aa8.56□□□□□ -1.04
MCF2L-218ENST00000442625 SPAG11AQ6PDA7 123 aa8.55□□□□□ -1.04
MCF2L-218ENST00000442625 ANAPC11Q9NYG5 84 aa8.55□□□□□ -1.04
MCF2L-218ENST00000442625 H3BPC8 53 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms