RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 C10orf99Q6UWK7 81 aa3.65□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 FBN2P35556 2912 aa3.65□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 NDUFB1O75438 58 aa3.65□□□□□ -1.83
ALMS1-IT1-201ENST00000441587 A0A1W2PNM2 257 aa3.64□□□□□ -1.83
ALMS1-IT1-201ENST00000441587 M0R2N4 97 aa3.64□□□□□ -1.83
ALMS1-IT1-201ENST00000441587 SPAG11BQ08648 103 aa3.64□□□□□ -1.83
ALMS1-IT1-201ENST00000441587 DEFB114Q30KQ6 69 aa3.64□□□□□ -1.83
ALMS1-IT1-201ENST00000441587 SPAG11AQ6PDA7 123 aa3.64□□□□□ -1.83
ALMS1-IT1-201ENST00000441587 KRTAP7-1Q8IUC3 87 aa3.64□□□□□ -1.83
ALMS1-IT1-201ENST00000441587 Q9BRP9 147 aa3.64□□□□□ -1.83
ALMS1-IT1-201ENST00000441587 Q8NAQ8 132 aa3.64□□□□□ -1.83
ALMS1-IT1-201ENST00000441587 KRTAP10-9P60411 292 aa3.63□□□□□ -1.83
ALMS1-IT1-201ENST00000441587 COX7B2Q8TF08 81 aa3.63□□□□□ -1.83
ALMS1-IT1-201ENST00000441587 APCP25054 2843 aa3.63□□□□□ -1.83
ALMS1-IT1-201ENST00000441587 SONP18583 2426 aaKnown RBP3.62□□□□□ -1.83
ALMS1-IT1-201ENST00000441587 LINC00158P58513 81 aa3.62□□□□□ -1.83
ALMS1-IT1-201ENST00000441587 DEFB116Q30KQ4 102 aa3.62□□□□□ -1.83
ALMS1-IT1-201ENST00000441587 CCDC168Q8NDH2 2452 aa3.62□□□□□ -1.83
ALMS1-IT1-201ENST00000441587 ITPR3Q14573 2671 aa3.62□□□□□ -1.83
ALMS1-IT1-201ENST00000441587 SPINK13Q1W4C9 94 aa3.62□□□□□ -1.83
ALMS1-IT1-201ENST00000441587 DMAC1Q96GE9 116 aa3.62□□□□□ -1.83
ALMS1-IT1-201ENST00000441587 KRTAP9-3Q9BYQ3 159 aa3.62□□□□□ -1.83
ALMS1-IT1-201ENST00000441587 LINC00575Q6W349 94 aa3.61□□□□□ -1.83
ALMS1-IT1-201ENST00000441587 WNK1Q9H4A3 2382 aa3.61□□□□□ -1.83
ALMS1-IT1-201ENST00000441587 IGLV4-60A0A075B6I1 120 aa3.61□□□□□ -1.83
ALMS1-IT1-201ENST00000441587 DEFB136Q30KP8 78 aa3.61□□□□□ -1.83
ALMS1-IT1-201ENST00000441587 C1orf137Q5JT78 98 aa3.61□□□□□ -1.83
ALMS1-IT1-201ENST00000441587 C4orf3Q8WVX3 66 aa3.61□□□□□ -1.83
ALMS1-IT1-201ENST00000441587 LINC00208Q96KT6 92 aa3.61□□□□□ -1.83
ALMS1-IT1-201ENST00000441587 FLNAP21333 2647 aaKnown RBP3.6□□□□□ -1.83
ALMS1-IT1-201ENST00000441587 CHD6Q8TD26 2715 aa3.6□□□□□ -1.83
ALMS1-IT1-201ENST00000441587 A0A1B0GU33 70 aa3.6□□□□□ -1.83
ALMS1-IT1-201ENST00000441587 DEFB131AP59861 70 aa3.6□□□□□ -1.83
ALMS1-IT1-201ENST00000441587 KRTAP26-1Q6PEX3 210 aa3.6□□□□□ -1.83
ALMS1-IT1-201ENST00000441587 NF1P21359 2839 aa3.6□□□□□ -1.83
ALMS1-IT1-201ENST00000441587 ETDCA0A1B0GVM5 59 aa3.59□□□□□ -1.83
ALMS1-IT1-201ENST00000441587 KLK12Q9UKR0 248 aa3.59□□□□□ -1.83
ALMS1-IT1-201ENST00000441587 SETD2Q9BYW2 2564 aaPredicted RBP3.59□□□□□ -1.83
ALMS1-IT1-201ENST00000441587 TRGV2A0A075B6R0 118 aa3.59□□□□□ -1.84
ALMS1-IT1-201ENST00000441587 HTN1P15515 57 aa3.59□□□□□ -1.84
ALMS1-IT1-201ENST00000441587 COX7BP24311 80 aa3.59□□□□□ -1.84
ALMS1-IT1-201ENST00000441587 KPRPQ5T749 579 aaPredicted RBP3.59□□□□□ -1.84
ALMS1-IT1-201ENST00000441587 A8MTW9 85 aa3.58□□□□□ -1.84
ALMS1-IT1-201ENST00000441587 NOTCH3Q9UM47 2321 aa3.58□□□□□ -1.84
ALMS1-IT1-201ENST00000441587 NUPR2A6NF83 97 aa3.58□□□□□ -1.84
ALMS1-IT1-201ENST00000441587 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
ALMS1-IT1-201ENST00000441587 LINC00612Q8N6U2 182 aa3.58□□□□□ -1.84
ALMS1-IT1-201ENST00000441587 Q8N9L7 120 aa3.58□□□□□ -1.84
ALMS1-IT1-201ENST00000441587 ACANP16112 2415 aa3.57□□□□□ -1.84
ALMS1-IT1-201ENST00000441587 Q5W150 140 aa3.57□□□□□ -1.84
ALMS1-IT1-201ENST00000441587 TENM4Q6N022 2769 aa3.57□□□□□ -1.84
ALMS1-IT1-201ENST00000441587 PLAC8Q9NZF1 115 aa3.57□□□□□ -1.84
ALMS1-IT1-201ENST00000441587 LINC01558Q9Y6Z2 57 aa3.57□□□□□ -1.84
ALMS1-IT1-201ENST00000441587 MTORP42345 2549 aa3.57□□□□□ -1.84
ALMS1-IT1-201ENST00000441587 ZNF469Q96JG9 3925 aaPredicted RBP3.57□□□□□ -1.84
ALMS1-IT1-201ENST00000441587 KRTAP25-1Q3LHN0 102 aa3.56□□□□□ -1.84
ALMS1-IT1-201ENST00000441587 ITPR2Q14571 2701 aa3.56□□□□□ -1.84
ALMS1-IT1-201ENST00000441587 HELZ2Q9BYK8 2649 aaKnown RBP3.56□□□□□ -1.84
ALMS1-IT1-201ENST00000441587 WFDC10AQ9H1F0 79 aa3.56□□□□□ -1.84
ALMS1-IT1-201ENST00000441587 PRR34Q9NV39 138 aa3.56□□□□□ -1.84
ALMS1-IT1-201ENST00000441587 AKAP9Q99996 3911 aa3.56□□□□□ -1.84
ALMS1-IT1-201ENST00000441587 NBPF19A0A087WUL8 3843 aa3.55□□□□□ -1.84
ALMS1-IT1-201ENST00000441587 ST20-AS1Q8NBB2 130 aa3.55□□□□□ -1.84
ALMS1-IT1-201ENST00000441587 TOMM7Q9P0U1 55 aa3.55□□□□□ -1.84
ALMS1-IT1-201ENST00000441587 ZNF861PO60384 105 aa3.55□□□□□ -1.84
ALMS1-IT1-201ENST00000441587 C9orf163Q8N9P6 203 aa3.55□□□□□ -1.84
ALMS1-IT1-201ENST00000441587 KCNQ1DNQ9H478 68 aa3.55□□□□□ -1.84
ALMS1-IT1-201ENST00000441587 JMJD1CQ15652 2540 aa3.54□□□□□ -1.84
ALMS1-IT1-201ENST00000441587 PRB2P02812 416 aaPredicted RBP3.54□□□□□ -1.84
ALMS1-IT1-201ENST00000441587 PDZD2O15018 2839 aa3.54□□□□□ -1.84
ALMS1-IT1-201ENST00000441587 J3QKU1 62 aa3.53□□□□□ -1.84
ALMS1-IT1-201ENST00000441587 Q6ZQY7 126 aa3.53□□□□□ -1.84
ALMS1-IT1-201ENST00000441587 CNBPP62633 177 aaKnown RBP3.53□□□□□ -1.84
ALMS1-IT1-201ENST00000441587 HIVEP2P31629 2446 aa3.53□□□□□ -1.84
ALMS1-IT1-201ENST00000441587 SETXQ7Z333 2677 aaKnown RBP3.52□□□□□ -1.85
ALMS1-IT1-201ENST00000441587 COA5Q86WW8 74 aa3.52□□□□□ -1.85
ALMS1-IT1-201ENST00000441587 NIPBLQ6KC79 2804 aaeCLIP3.52□□□□□ -1.85
ALMS1-IT1-201ENST00000441587 TRGV1A0A0A0MS02 117 aa3.52□□□□□ -1.85
ALMS1-IT1-201ENST00000441587 SPINK7P58062 85 aa3.52□□□□□ -1.85
ALMS1-IT1-201ENST00000441587 C2CD3Q4AC94 2353 aa3.51□□□□□ -1.85
ALMS1-IT1-201ENST00000441587 FASNP49327 2511 aaKnown RBP3.51□□□□□ -1.85
ALMS1-IT1-201ENST00000441587 COX17Q14061 63 aa3.51□□□□□ -1.85
ALMS1-IT1-201ENST00000441587 NOTCH2Q04721 2471 aa3.5□□□□□ -1.85
ALMS1-IT1-201ENST00000441587 NOP10Q9NPE3 64 aaKnown RBP3.5□□□□□ -1.85
ALMS1-IT1-201ENST00000441587 FN1P02751 2386 aaKnown RBP3.49□□□□□ -1.85
ALMS1-IT1-201ENST00000441587 KRTAP21-3Q3LHN1 58 aa3.49□□□□□ -1.85
ALMS1-IT1-201ENST00000441587 Q8IZM0 81 aa3.49□□□□□ -1.85
ALMS1-IT1-201ENST00000441587 CUBNO60494 3623 aa3.49□□□□□ -1.85
ALMS1-IT1-201ENST00000441587 UQCR11O14957 56 aa3.49□□□□□ -1.85
ALMS1-IT1-201ENST00000441587 GCN1Q92616 2671 aaKnown RBP3.48□□□□□ -1.85
ALMS1-IT1-201ENST00000441587 HECTD1Q9ULT8 2610 aa3.48□□□□□ -1.85
ALMS1-IT1-201ENST00000441587 H0Y9P7 68 aa3.48□□□□□ -1.85
ALMS1-IT1-201ENST00000441587 IGLV6-57P01721 117 aa3.48□□□□□ -1.85
ALMS1-IT1-201ENST00000441587 ANK3Q12955 4377 aaKnown RBP3.47□□□□□ -1.85
ALMS1-IT1-201ENST00000441587 TRGV4A0A0C4DH28 118 aa3.47□□□□□ -1.85
ALMS1-IT1-201ENST00000441587 SMR3AQ99954 134 aa3.47□□□□□ -1.85
ALMS1-IT1-201ENST00000441587 IGKV3OR2-268A0A0C4DH90 116 aa3.46□□□□□ -1.86
ALMS1-IT1-201ENST00000441587 SPINT4Q6UDR6 99 aa3.46□□□□□ -1.86
ALMS1-IT1-201ENST00000441587 NSD1Q96L73 2696 aaPredicted RBP3.45□□□□□ -1.86
ALMS1-IT1-201ENST00000441587 LINC00959A0A1B0GUT2 108 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 187.5 ms