RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 C16orf74Q96GX8 76 aa6.56□□□□□ -1.36
SYNE2-206ENST00000441438 CDKN2A-AS1Q9UH64 79 aa6.56□□□□□ -1.36
SYNE2-206ENST00000441438 C9orf163Q8N9P6 203 aa6.56□□□□□ -1.36
SYNE2-206ENST00000441438 NDUFB1O75438 58 aa6.55□□□□□ -1.36
SYNE2-206ENST00000441438 ZNF625Q96I27 306 aaPredicted RBP6.55□□□□□ -1.36
SYNE2-206ENST00000441438 Q8N377 158 aa6.55□□□□□ -1.36
SYNE2-206ENST00000441438 COX7B2Q8TF08 81 aa6.55□□□□□ -1.36
SYNE2-206ENST00000441438 KLK12Q9UKR0 248 aa6.54□□□□□ -1.36
SYNE2-206ENST00000441438 FBN1P35555 2871 aaKnown RBP6.53□□□□□ -1.36
SYNE2-206ENST00000441438 FBN3Q75N90 2809 aa6.53□□□□□ -1.36
SYNE2-206ENST00000441438 TENM1Q9UKZ4 2725 aa6.53□□□□□ -1.36
SYNE2-206ENST00000441438 NUPR2A6NF83 97 aa6.52□□□□□ -1.37
SYNE2-206ENST00000441438 H0YGX0 51 aa6.52□□□□□ -1.37
SYNE2-206ENST00000441438 DMAC1Q96GE9 116 aa6.52□□□□□ -1.37
SYNE2-206ENST00000441438 ANK2Q01484 3957 aa6.52□□□□□ -1.37
SYNE2-206ENST00000441438 A8MTW9 85 aa6.52□□□□□ -1.37
SYNE2-206ENST00000441438 IGHV3-53P01767 116 aa6.51□□□□□ -1.37
SYNE2-206ENST00000441438 C9orf129Q5T035 196 aaKnown RBP6.51□□□□□ -1.37
SYNE2-206ENST00000441438 IGLV7-46A0A075B6I9 117 aa6.5□□□□□ -1.37
SYNE2-206ENST00000441438 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.5□□□□□ -1.37
SYNE2-206ENST00000441438 IGKV2-29A2NJV5 120 aaPredicted RBP6.5□□□□□ -1.37
SYNE2-206ENST00000441438 COX6A2Q02221 97 aa6.5□□□□□ -1.37
SYNE2-206ENST00000441438 COL6A5A8TX70 2615 aa6.49□□□□□ -1.37
SYNE2-206ENST00000441438 SPANXA2-OT1Q8N9U9 137 aa6.49□□□□□ -1.37
SYNE2-206ENST00000441438 WFDC10AQ9H1F0 79 aa6.49□□□□□ -1.37
SYNE2-206ENST00000441438 CCL18P55774 89 aa6.48□□□□□ -1.37
SYNE2-206ENST00000441438 IGKV3OR2-268A0A0C4DH90 116 aa6.48□□□□□ -1.37
SYNE2-206ENST00000441438 JMJD7-PLA2G4BH0Y9G9 81 aa6.48□□□□□ -1.37
SYNE2-206ENST00000441438 TRRAPQ9Y4A5 3859 aa6.48□□□□□ -1.37
SYNE2-206ENST00000441438 IGKV2-28A0A075B6P5 120 aa6.47□□□□□ -1.37
SYNE2-206ENST00000441438 H0Y9P7 68 aa6.47□□□□□ -1.37
SYNE2-206ENST00000441438 IGKV2D-28P01615 120 aa6.47□□□□□ -1.37
SYNE2-206ENST00000441438 A0A087WYN8 130 aa6.46□□□□□ -1.38
SYNE2-206ENST00000441438 SMIM11BQ8TCY0 68 aa6.46□□□□□ -1.38
SYNE2-206ENST00000441438 Q5W150 140 aa6.45□□□□□ -1.38
SYNE2-206ENST00000441438 TRGV1A0A0A0MS02 117 aa6.44□□□□□ -1.38
SYNE2-206ENST00000441438 PDE6GP18545 87 aa6.44□□□□□ -1.38
SYNE2-206ENST00000441438 KRTAP15-1Q3LI76 137 aa6.44□□□□□ -1.38
SYNE2-206ENST00000441438 NCR3O14931 201 aa6.43□□□□□ -1.38
SYNE2-206ENST00000441438 SPRR4Q96PI1 79 aa6.43□□□□□ -1.38
SYNE2-206ENST00000441438 PKD1L1Q8TDX9 2849 aa6.42□□□□□ -1.38
SYNE2-206ENST00000441438 A0A1B0GU33 70 aa6.42□□□□□ -1.38
SYNE2-206ENST00000441438 HAMPP81172 84 aa6.42□□□□□ -1.38
SYNE2-206ENST00000441438 STAB1Q9NY15 2570 aa6.42□□□□□ -1.38
SYNE2-206ENST00000441438 LCE2AQ5TA79 106 aaPredicted RBP6.41□□□□□ -1.38
SYNE2-206ENST00000441438 Q6ZTI0 123 aa6.41□□□□□ -1.38
SYNE2-206ENST00000441438 DEFB114Q30KQ6 69 aa6.41□□□□□ -1.38
SYNE2-206ENST00000441438 ZNF861PO60384 105 aa6.41□□□□□ -1.38
SYNE2-206ENST00000441438 SPATA8Q6RVD6 105 aa6.4□□□□□ -1.39
SYNE2-206ENST00000441438 NOP10Q9NPE3 64 aaKnown RBP6.4□□□□□ -1.39
SYNE2-206ENST00000441438 NOTCH1P46531 2555 aa6.4□□□□□ -1.39
SYNE2-206ENST00000441438 LINC00959A0A1B0GUT2 108 aa6.39□□□□□ -1.39
SYNE2-206ENST00000441438 TRBV6-4A0A1B0GX49 114 aa6.39□□□□□ -1.39
SYNE2-206ENST00000441438 PRB2P02812 416 aaPredicted RBP6.39□□□□□ -1.39
SYNE2-206ENST00000441438 NBEAL1Q6ZS30 2694 aa6.38□□□□□ -1.39
SYNE2-206ENST00000441438 C4orf3Q8WVX3 66 aa6.37□□□□□ -1.39
SYNE2-206ENST00000441438 IGLV7-43P04211 117 aa6.37□□□□□ -1.39
SYNE2-206ENST00000441438 TRGV2A0A075B6R0 118 aa6.36□□□□□ -1.39
SYNE2-206ENST00000441438 A0A096LPF7 62 aa6.36□□□□□ -1.39
SYNE2-206ENST00000441438 LCE2CQ5TA81 110 aa6.36□□□□□ -1.39
SYNE2-206ENST00000441438 UQCR11O14957 56 aa6.36□□□□□ -1.39
SYNE2-206ENST00000441438 LINC00158P58513 81 aa6.36□□□□□ -1.39
SYNE2-206ENST00000441438 TOMM7Q9P0U1 55 aa6.36□□□□□ -1.39
SYNE2-206ENST00000441438 LOC110117498A0A087WWA1 95 aa6.35□□□□□ -1.39
SYNE2-206ENST00000441438 DEFB130BP0DP73 79 aa6.35□□□□□ -1.39
SYNE2-206ENST00000441438 DEFB130AP0DP74 79 aa6.35□□□□□ -1.39
SYNE2-206ENST00000441438 DEFB4AO15263 64 aa6.34□□□□□ -1.39
SYNE2-206ENST00000441438 CLPSL2Q6UWE3 100 aa6.34□□□□□ -1.4
SYNE2-206ENST00000441438 COA5Q86WW8 74 aa6.34□□□□□ -1.4
SYNE2-206ENST00000441438 A0A087WTM6 91 aa6.33□□□□□ -1.4
SYNE2-206ENST00000441438 SLPIP03973 132 aa6.33□□□□□ -1.4
SYNE2-206ENST00000441438 KRTAP10-3P60369 221 aa6.32□□□□□ -1.4
SYNE2-206ENST00000441438 DEFB116Q30KQ4 102 aa6.32□□□□□ -1.4
SYNE2-206ENST00000441438 DNAH3Q8TD57 4116 aa6.32□□□□□ -1.4
SYNE2-206ENST00000441438 TRGV4A0A0C4DH28 118 aa6.31□□□□□ -1.4
SYNE2-206ENST00000441438 SPINT4Q6UDR6 99 aa6.3□□□□□ -1.4
SYNE2-206ENST00000441438 IGLV4-60A0A075B6I1 120 aa6.29□□□□□ -1.4
SYNE2-206ENST00000441438 COX17Q14061 63 aa6.29□□□□□ -1.4
SYNE2-206ENST00000441438 Q8IZM0 81 aa6.29□□□□□ -1.4
SYNE2-206ENST00000441438 TENM3Q9P273 2699 aa6.28□□□□□ -1.4
SYNE2-206ENST00000441438 IGKV4-1P06312 121 aa6.28□□□□□ -1.4
SYNE2-206ENST00000441438 LINC00472Q9H8W2 130 aa6.28□□□□□ -1.4
SYNE2-206ENST00000441438 LINC00575Q6W349 94 aa6.27□□□□□ -1.41
SYNE2-206ENST00000441438 TYMSOSQ8TAI1 123 aa6.26□□□□□ -1.41
SYNE2-206ENST00000441438 HTN3P15516 51 aa6.25□□□□□ -1.41
SYNE2-206ENST00000441438 CMYA5Q8N3K9 4069 aa6.24□□□□□ -1.41
SYNE2-206ENST00000441438 ETDCA0A1B0GVM5 59 aa6.23□□□□□ -1.41
SYNE2-206ENST00000441438 DEFB135Q30KP9 77 aa6.23□□□□□ -1.41
SYNE2-206ENST00000441438 A0A1B0GUV1 79 aa6.23□□□□□ -1.41
SYNE2-206ENST00000441438 ST20-AS1Q8NBB2 130 aa6.23□□□□□ -1.41
SYNE2-206ENST00000441438 KCNQ1DNQ9H478 68 aa6.22□□□□□ -1.41
SYNE2-206ENST00000441438 NBDYA0A0U1RRE5 68 aa6.22□□□□□ -1.41
SYNE2-206ENST00000441438 MGAM2Q2M2H8 2515 aa6.2□□□□□ -1.42
SYNE2-206ENST00000441438 MEGF8Q7Z7M0 2845 aa6.2□□□□□ -1.42
SYNE2-206ENST00000441438 FAM168BA1KXE4 195 aa6.19□□□□□ -1.42
SYNE2-206ENST00000441438 LINC00612Q8N6U2 182 aa6.19□□□□□ -1.42
SYNE2-206ENST00000441438 M0R2N4 97 aa6.19□□□□□ -1.42
SYNE2-206ENST00000441438 IGLV6-57P01721 117 aa6.19□□□□□ -1.42
SYNE2-206ENST00000441438 Q96NJ1 140 aa6.17□□□□□ -1.42
SYNE2-206ENST00000441438 ANGP03950 147 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms