RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 APOBP04114 4563 aaKnown RBP11.7□□□□□ -0.54
SNX17-203ENST00000440760 IGLV5-48A0A075B6I7 105 aa11.69□□□□□ -0.54
SNX17-203ENST00000440760 H3BQ85 93 aa11.68□□□□□ -0.54
SNX17-203ENST00000440760 SS18L2Q9UHA2 77 aa11.68□□□□□ -0.54
SNX17-203ENST00000440760 GHRHP01286 108 aa11.67□□□□□ -0.54
SNX17-203ENST00000440760 CCDC179H3BU77 68 aa11.67□□□□□ -0.54
SNX17-203ENST00000440760 JMJD7-PLA2G4BH0Y9G9 81 aa11.66□□□□□ -0.54
SNX17-203ENST00000440760 VPS13BQ7Z7G8 4022 aa11.63□□□□□ -0.55
SNX17-203ENST00000440760 RBM3P98179 157 aaKnown RBP11.63□□□□□ -0.55
SNX17-203ENST00000440760 LINC00643Q86TS7 51 aa11.63□□□□□ -0.55
SNX17-203ENST00000440760 IGLV7-43P04211 117 aa11.62□□□□□ -0.55
SNX17-203ENST00000440760 GAGE2AQ6NT46 116 aa11.62□□□□□ -0.55
SNX17-203ENST00000440760 ZNF861PO60384 105 aa11.61□□□□□ -0.55
SNX17-203ENST00000440760 SMIM29Q86T20 159 aa11.61□□□□□ -0.55
SNX17-203ENST00000440760 DSCR8Q96T75 97 aa11.58□□□□□ -0.56
SNX17-203ENST00000440760 Q6ZQT0 140 aa11.57□□□□□ -0.56
SNX17-203ENST00000440760 TRBV7-4A0A0J9YYF1 115 aa11.56□□□□□ -0.56
SNX17-203ENST00000440760 SPRR4Q96PI1 79 aa11.56□□□□□ -0.56
SNX17-203ENST00000440760 LOC110117498A0A087WWA1 95 aa11.55□□□□□ -0.56
SNX17-203ENST00000440760 FAT1Q14517 4588 aa11.54□□□□□ -0.56
SNX17-203ENST00000440760 SMR3BP02814 79 aaPredicted RBP11.54□□□□□ -0.56
SNX17-203ENST00000440760 CCKP06307 115 aa11.54□□□□□ -0.56
SNX17-203ENST00000440760 SPRR1BP22528 89 aa11.54□□□□□ -0.56
SNX17-203ENST00000440760 FAM236AA0A1B0GUQ0 79 aa11.52□□□□□ -0.56
SNX17-203ENST00000440760 FAM236BA0A1B0GV22 79 aa11.52□□□□□ -0.56
SNX17-203ENST00000440760 A0A0G2JQZ4 141 aa11.52□□□□□ -0.57
SNX17-203ENST00000440760 ANAPC11Q9NYG5 84 aa11.52□□□□□ -0.57
SNX17-203ENST00000440760 F8WEM9 126 aa11.51□□□□□ -0.57
SNX17-203ENST00000440760 ZNF706Q9Y5V0 76 aaPredicted RBP11.49□□□□□ -0.57
SNX17-203ENST00000440760 LINC00483Q53H64 154 aa11.48□□□□□ -0.57
SNX17-203ENST00000440760 EPPK1P58107 5090 aaKnown RBP11.48□□□□□ -0.57
SNX17-203ENST00000440760 RPL37AP61513 92 aaKnown RBP11.47□□□□□ -0.57
SNX17-203ENST00000440760 LINC00846Q9NV44 126 aa11.47□□□□□ -0.57
SNX17-203ENST00000440760 UQCRQO14949 82 aa11.46□□□□□ -0.58
SNX17-203ENST00000440760 PDE6GP18545 87 aa11.46□□□□□ -0.58
SNX17-203ENST00000440760 IGLV9-49A0A0B4J1Y8 123 aa11.45□□□□□ -0.58
SNX17-203ENST00000440760 IGFL1Q6UW32 110 aa11.45□□□□□ -0.58
SNX17-203ENST00000440760 IGLV8-61A0A075B6I0 122 aa11.43□□□□□ -0.58
SNX17-203ENST00000440760 A0A1W2PNM2 257 aa11.43□□□□□ -0.58
SNX17-203ENST00000440760 HIST1H4AP62805 103 aaKnown RBP11.43□□□□□ -0.58
SNX17-203ENST00000440760 SMIM20Q8N5G0 67 aa11.43□□□□□ -0.58
SNX17-203ENST00000440760 HSPG2P98160 4391 aa11.42□□□□□ -0.58
SNX17-203ENST00000440760 C9orf153Q5TBE3 101 aa11.41□□□□□ -0.58
SNX17-203ENST00000440760 Q6JHZ5 121 aa11.4□□□□□ -0.58
SNX17-203ENST00000440760 RYR1P21817 5038 aa11.4□□□□□ -0.58
SNX17-203ENST00000440760 ATOX1O00244 68 aa11.39□□□□□ -0.59
SNX17-203ENST00000440760 COX7CP15954 63 aa11.39□□□□□ -0.59
SNX17-203ENST00000440760 Q8NBF4 154 aa11.39□□□□□ -0.59
SNX17-203ENST00000440760 MOBPQ13875 183 aa11.38□□□□□ -0.59
SNX17-203ENST00000440760 KRTAP10-4P60372 401 aaPredicted RBP11.36□□□□□ -0.59
SNX17-203ENST00000440760 CRYGAP11844 174 aa11.34□□□□□ -0.59
SNX17-203ENST00000440760 KIAA1109Q2LD37 5005 aa11.34□□□□□ -0.59
SNX17-203ENST00000440760 A0A087X002 238 aa11.33□□□□□ -0.6
SNX17-203ENST00000440760 KRTAP1-4P0C5Y4 121 aa11.33□□□□□ -0.6
SNX17-203ENST00000440760 UBL5Q9BZL1 73 aa11.32□□□□□ -0.6
SNX17-203ENST00000440760 Q6ZVQ6 151 aa11.31□□□□□ -0.6
SNX17-203ENST00000440760 CDK2AP2O75956 126 aa11.3□□□□□ -0.6
SNX17-203ENST00000440760 SPINK6Q6UWN8 80 aa11.29□□□□□ -0.6
SNX17-203ENST00000440760 HRCT1Q6UXD1 115 aa11.28□□□□□ -0.6
SNX17-203ENST00000440760 IGKV3D-7A0A0C4DH55 119 aa11.28□□□□□ -0.6
SNX17-203ENST00000440760 KRTAP13-2Q52LG2 175 aa11.28□□□□□ -0.6
SNX17-203ENST00000440760 A0A087WSZ3 146 aa11.27□□□□□ -0.61
SNX17-203ENST00000440760 ATP5EP2Q5VTU8 51 aa11.27□□□□□ -0.61
SNX17-203ENST00000440760 SERP2Q8N6R1 65 aa11.27□□□□□ -0.61
SNX17-203ENST00000440760 PKHD1L1Q86WI1 4243 aa11.25□□□□□ -0.61
SNX17-203ENST00000440760 FAM229BQ4G0N7 80 aa11.24□□□□□ -0.61
SNX17-203ENST00000440760 PLA2G1BP04054 148 aaKnown RBP11.23□□□□□ -0.61
SNX17-203ENST00000440760 RPS28P62857 69 aaKnown RBP11.23□□□□□ -0.61
SNX17-203ENST00000440760 KRTAP17-1Q9BYP8 105 aa11.23□□□□□ -0.61
SNX17-203ENST00000440760 NREPQ16612 68 aa11.23□□□□□ -0.61
SNX17-203ENST00000440760 Q5VSD8 79 aa11.23□□□□□ -0.61
SNX17-203ENST00000440760 A0A1B0GW54 56 aa11.22□□□□□ -0.61
SNX17-203ENST00000440760 FAM229AH3BQW9 127 aa11.22□□□□□ -0.61
SNX17-203ENST00000440760 J3KT08 172 aa11.2□□□□□ -0.62
SNX17-203ENST00000440760 A0A087WVE0 104 aa11.18□□□□□ -0.62
SNX17-203ENST00000440760 TMEM258P61165 79 aa11.18□□□□□ -0.62
SNX17-203ENST00000440760 SSBP3-AS1Q7Z2R9 100 aa11.17□□□□□ -0.62
SNX17-203ENST00000440760 PRR26Q8N8Z3 221 aa11.17□□□□□ -0.62
SNX17-203ENST00000440760 DEFB116Q30KQ4 102 aa11.16□□□□□ -0.62
SNX17-203ENST00000440760 Q8N9L7 120 aa11.12□□□□□ -0.63
SNX17-203ENST00000440760 TYMSOSQ8TAI1 123 aa11.12□□□□□ -0.63
SNX17-203ENST00000440760 BPY2O14599 106 aa11.12□□□□□ -0.63
SNX17-203ENST00000440760 CXCL6P80162 114 aa11.11□□□□□ -0.63
SNX17-203ENST00000440760 CYSTM1Q9H1C7 97 aa11.1□□□□□ -0.63
SNX17-203ENST00000440760 LRP1Q07954 4544 aaKnown RBP11.09□□□□□ -0.63
SNX17-203ENST00000440760 CD164Q04900 197 aa11.07□□□□□ -0.64
SNX17-203ENST00000440760 Q8N1X5 172 aa11.07□□□□□ -0.64
SNX17-203ENST00000440760 LINC00472Q9H8W2 130 aa11.07□□□□□ -0.64
SNX17-203ENST00000440760 DSCR10P59022 87 aa11.06□□□□□ -0.64
SNX17-203ENST00000440760 Q96NJ1 140 aa11.05□□□□□ -0.64
SNX17-203ENST00000440760 IGKV4-1P06312 121 aa11.03□□□□□ -0.64
SNX17-203ENST00000440760 K7EQZ3 153 aa11.02□□□□□ -0.65
SNX17-203ENST00000440760 FLG2Q5D862 2391 aaPredicted RBP11.02□□□□□ -0.65
SNX17-203ENST00000440760 BIRC6Q9NR09 4857 aa11.02□□□□□ -0.65
SNX17-203ENST00000440760 FAT3Q8TDW7 4589 aa11.02□□□□□ -0.65
SNX17-203ENST00000440760 TRAV7A0A075B6U4 112 aa10.99□□□□□ -0.65
SNX17-203ENST00000440760 LINC00304Q8N9R0 145 aa10.99□□□□□ -0.65
SNX17-203ENST00000440760 TNXBP22105 4242 aa10.99□□□□□ -0.65
SNX17-203ENST00000440760 MYCBP2O75592 4640 aa10.99□□□□□ -0.65
SNX17-203ENST00000440760 C4orf48Q5BLP8 95 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms