RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 TRACP01848 142 aa10.39□□□□□ -0.75
CCDC188-201ENST00000439765 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.39□□□□□ -0.75
CCDC188-201ENST00000439765 Q6ZQY7 126 aa10.39□□□□□ -0.75
CCDC188-201ENST00000439765 DNAL4O96015 105 aa10.37□□□□□ -0.75
CCDC188-201ENST00000439765 SPCS1Q9Y6A9 102 aa10.37□□□□□ -0.75
CCDC188-201ENST00000439765 LINC01547P58512 204 aaPredicted RBP10.36□□□□□ -0.75
CCDC188-201ENST00000439765 C3orf22Q8N5N4 141 aa10.36□□□□□ -0.75
CCDC188-201ENST00000439765 DEFB105AQ8NG35 78 aa10.36□□□□□ -0.75
CCDC188-201ENST00000439765 IGLV5-48A0A075B6I7 105 aa10.35□□□□□ -0.75
CCDC188-201ENST00000439765 A0A1B0GV90 55 aa10.35□□□□□ -0.75
CCDC188-201ENST00000439765 OCIAD2Q56VL3 154 aa10.35□□□□□ -0.75
CCDC188-201ENST00000439765 GAGE2AQ6NT46 116 aa10.35□□□□□ -0.75
CCDC188-201ENST00000439765 TEX49A0A1B0GTD5 131 aa10.33□□□□□ -0.76
CCDC188-201ENST00000439765 SPRR1BP22528 89 aa10.33□□□□□ -0.76
CCDC188-201ENST00000439765 Q8N377 158 aa10.33□□□□□ -0.76
CCDC188-201ENST00000439765 H3BMG7 143 aa10.32□□□□□ -0.76
CCDC188-201ENST00000439765 K7EP34 96 aa10.32□□□□□ -0.76
CCDC188-201ENST00000439765 LINC00483Q53H64 154 aa10.32□□□□□ -0.76
CCDC188-201ENST00000439765 ORMDL1Q9P0S3 153 aa10.32□□□□□ -0.76
CCDC188-201ENST00000439765 GHRHP01286 108 aa10.31□□□□□ -0.76
CCDC188-201ENST00000439765 LINC00304Q8N9R0 145 aa10.3□□□□□ -0.76
CCDC188-201ENST00000439765 LPAP08519 4548 aa10.3□□□□□ -0.76
CCDC188-201ENST00000439765 PPDPFLQ8WWR9 84 aa10.3□□□□□ -0.76
CCDC188-201ENST00000439765 H3BQ85 93 aa10.29□□□□□ -0.76
CCDC188-201ENST00000439765 GTF2H5Q6ZYL4 71 aa10.29□□□□□ -0.76
CCDC188-201ENST00000439765 C9JAW5 83 aa10.28□□□□□ -0.76
CCDC188-201ENST00000439765 BAALC-AS2P0C853 105 aa10.28□□□□□ -0.76
CCDC188-201ENST00000439765 TMEM256-PLSCR3K7ERE1 68 aa10.27□□□□□ -0.77
CCDC188-201ENST00000439765 SMIM29Q86T20 159 aa10.27□□□□□ -0.77
CCDC188-201ENST00000439765 IGLV9-49A0A0B4J1Y8 123 aa10.26□□□□□ -0.77
CCDC188-201ENST00000439765 MOBPQ13875 183 aa10.24□□□□□ -0.77
CCDC188-201ENST00000439765 LAMTOR3Q9UHA4 124 aa10.24□□□□□ -0.77
CCDC188-201ENST00000439765 Q8NBF4 154 aa10.23□□□□□ -0.77
CCDC188-201ENST00000439765 UBE2V1Q13404 147 aa10.23□□□□□ -0.77
CCDC188-201ENST00000439765 MTURNQ8N3F0 131 aa10.23□□□□□ -0.77
CCDC188-201ENST00000439765 PRR4Q16378 134 aa10.22□□□□□ -0.77
CCDC188-201ENST00000439765 H3BT86 120 aa10.21□□□□□ -0.78
CCDC188-201ENST00000439765 NDUFV3P56181 108 aaKnown RBP10.21□□□□□ -0.78
CCDC188-201ENST00000439765 C9orf153Q5TBE3 101 aa10.2□□□□□ -0.78
CCDC188-201ENST00000439765 RETNLBQ9BQ08 111 aa10.19□□□□□ -0.78
CCDC188-201ENST00000439765 PRO0461Q9UI25 63 aa10.19□□□□□ -0.78
CCDC188-201ENST00000439765 ANKRD29Q8N6D5 301 aa10.18□□□□□ -0.78
CCDC188-201ENST00000439765 F8WEM9 126 aa10.17□□□□□ -0.78
CCDC188-201ENST00000439765 SMCPP49901 116 aaPredicted RBP10.17□□□□□ -0.78
CCDC188-201ENST00000439765 C4orf48Q5BLP8 95 aa10.17□□□□□ -0.78
CCDC188-201ENST00000439765 SPAG11AQ6PDA7 123 aa10.16□□□□□ -0.78
CCDC188-201ENST00000439765 IGLV8-61A0A075B6I0 122 aa10.15□□□□□ -0.78
CCDC188-201ENST00000439765 F8W1H4 67 aa10.15□□□□□ -0.78
CCDC188-201ENST00000439765 SSBP3-AS1Q7Z2R9 100 aa10.14□□□□□ -0.79
CCDC188-201ENST00000439765 A0A1B0GV72 72 aa10.1□□□□□ -0.79
CCDC188-201ENST00000439765 JMJD7-PLA2G4BH0Y9G9 81 aa10.1□□□□□ -0.79
CCDC188-201ENST00000439765 SPINK1P00995 79 aa10.1□□□□□ -0.79
CCDC188-201ENST00000439765 RBM3P98179 157 aaKnown RBP10.1□□□□□ -0.79
CCDC188-201ENST00000439765 Q6JHZ5 121 aa10.1□□□□□ -0.79
CCDC188-201ENST00000439765 OBSCN-AS1Q96MR7 158 aa10.09□□□□□ -0.79
CCDC188-201ENST00000439765 IGFL1Q6UW32 110 aa10.07□□□□□ -0.8
CCDC188-201ENST00000439765 A0A0G2JQZ4 141 aa10.06□□□□□ -0.8
CCDC188-201ENST00000439765 DSCR8Q96T75 97 aa10.05□□□□□ -0.8
CCDC188-201ENST00000439765 TRBV7-4A0A0J9YYF1 115 aa10.04□□□□□ -0.8
CCDC188-201ENST00000439765 ETDBQ3ZM63 59 aa10.03□□□□□ -0.8
CCDC188-201ENST00000439765 HRCT1Q6UXD1 115 aa10.03□□□□□ -0.8
CCDC188-201ENST00000439765 TEN1Q86WV5 123 aa10.03□□□□□ -0.8
CCDC188-201ENST00000439765 MUC2Q02817 5179 aa10.02□□□□□ -0.8
CCDC188-201ENST00000439765 IGLV7-46A0A075B6I9 117 aa10.02□□□□□ -0.81
CCDC188-201ENST00000439765 RPS29P62273 56 aaKnown RBP10.02□□□□□ -0.81
CCDC188-201ENST00000439765 C14orf132Q9NPU4 83 aa10.02□□□□□ -0.81
CCDC188-201ENST00000439765 LOC110117498A0A087WWA1 95 aa10□□□□□ -0.81
CCDC188-201ENST00000439765 PDE6GP18545 87 aa10□□□□□ -0.81
CCDC188-201ENST00000439765 CD164Q04900 197 aa10□□□□□ -0.81
CCDC188-201ENST00000439765 A0A1W2PNM2 257 aa9.99□□□□□ -0.81
CCDC188-201ENST00000439765 Q6Q795 121 aa9.98□□□□□ -0.81
CCDC188-201ENST00000439765 Q6ZQT0 140 aa9.98□□□□□ -0.81
CCDC188-201ENST00000439765 CCKP06307 115 aa9.98□□□□□ -0.81
CCDC188-201ENST00000439765 FP248Q71RG6 208 aaPredicted RBP9.98□□□□□ -0.81
CCDC188-201ENST00000439765 TPRXLQ17RH7 258 aa9.97□□□□□ -0.81
CCDC188-201ENST00000439765 C21orf62-AS1Q17RA5 79 aa9.94□□□□□ -0.82
CCDC188-201ENST00000439765 VPS25Q9BRG1 176 aa9.94□□□□□ -0.82
CCDC188-201ENST00000439765 LIMD2Q9BT23 127 aa9.94□□□□□ -0.82
CCDC188-201ENST00000439765 TRBV7-7A0A0K0K1E9 115 aa9.93□□□□□ -0.82
CCDC188-201ENST00000439765 CDIP1Q9H305 208 aa9.93□□□□□ -0.82
CCDC188-201ENST00000439765 A0A0U1RQV1 116 aa9.91□□□□□ -0.82
CCDC188-201ENST00000439765 A0A087WSZ3 146 aa9.88□□□□□ -0.83
CCDC188-201ENST00000439765 A0A1B0GW54 56 aa9.88□□□□□ -0.83
CCDC188-201ENST00000439765 Q5XG85 94 aa9.88□□□□□ -0.83
CCDC188-201ENST00000439765 KRTAP13-3Q3SY46 172 aa9.87□□□□□ -0.83
CCDC188-201ENST00000439765 SS18L2Q9UHA2 77 aa9.84□□□□□ -0.83
CCDC188-201ENST00000439765 MUC17Q685J3 4493 aa9.82□□□□□ -0.84
CCDC188-201ENST00000439765 ASB16-AS1Q495Z4 193 aa9.82□□□□□ -0.84
CCDC188-201ENST00000439765 FAT4Q6V0I7 4981 aa9.8□□□□□ -0.84
CCDC188-201ENST00000439765 C1orf195Q5TG92 126 aa9.78□□□□□ -0.84
CCDC188-201ENST00000439765 LCE2AQ5TA79 106 aaPredicted RBP9.77□□□□□ -0.85
CCDC188-201ENST00000439765 LINC00846Q9NV44 126 aa9.76□□□□□ -0.85
CCDC188-201ENST00000439765 ACYP1P07311 99 aa9.75□□□□□ -0.85
CCDC188-201ENST00000439765 NREPQ16612 68 aa9.75□□□□□ -0.85
CCDC188-201ENST00000439765 FAM240AA0A1B0GVK7 77 aa9.74□□□□□ -0.85
CCDC188-201ENST00000439765 J3QR89 54 aa9.74□□□□□ -0.85
CCDC188-201ENST00000439765 Q96NJ1 140 aa9.74□□□□□ -0.85
CCDC188-201ENST00000439765 LINC00472Q9H8W2 130 aa9.74□□□□□ -0.85
CCDC188-201ENST00000439765 C9orf92A6NGG3 77 aa9.73□□□□□ -0.85
CCDC188-201ENST00000439765 K7ERU9 68 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms