RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 RPL37AP61513 92 aaKnown RBP7.52□□□□□ -1.21
TRAPPC9-202ENST00000438773 CXCL6P80162 114 aa7.51□□□□□ -1.21
TRAPPC9-202ENST00000438773 TLX1NBP0CAT3 122 aa7.51□□□□□ -1.21
TRAPPC9-202ENST00000438773 CASC2Q6XLA1 102 aa7.51□□□□□ -1.21
TRAPPC9-202ENST00000438773 IGHV6-1A0A0B4J1U7 121 aa7.5□□□□□ -1.21
TRAPPC9-202ENST00000438773 EPM2AB3EWF7 344 aa7.5□□□□□ -1.21
TRAPPC9-202ENST00000438773 OTOGQ6ZRI0 2925 aa7.5□□□□□ -1.21
TRAPPC9-202ENST00000438773 C9orf163Q8N9P6 203 aa7.5□□□□□ -1.21
TRAPPC9-202ENST00000438773 CIRBP-AS1Q8TBR5 109 aa7.49□□□□□ -1.21
TRAPPC9-202ENST00000438773 H0Y9P7 68 aa7.49□□□□□ -1.21
TRAPPC9-202ENST00000438773 LOC110117498A0A087WWA1 95 aa7.47□□□□□ -1.21
TRAPPC9-202ENST00000438773 HCG22E2RYF7 251 aa7.47□□□□□ -1.21
TRAPPC9-202ENST00000438773 A0A087WTM6 91 aa7.47□□□□□ -1.21
TRAPPC9-202ENST00000438773 H7BZZ5 65 aa7.46□□□□□ -1.22
TRAPPC9-202ENST00000438773 LINC00476Q8WZB0 136 aa7.46□□□□□ -1.22
TRAPPC9-202ENST00000438773 TENM1Q9UKZ4 2725 aa7.46□□□□□ -1.22
TRAPPC9-202ENST00000438773 Q5XG85 94 aa7.45□□□□□ -1.22
TRAPPC9-202ENST00000438773 PLA2G2DQ9UNK4 145 aa7.45□□□□□ -1.22
TRAPPC9-202ENST00000438773 CNBPP62633 177 aaKnown RBP7.45□□□□□ -1.22
TRAPPC9-202ENST00000438773 Q8NBF4 154 aa7.45□□□□□ -1.22
TRAPPC9-202ENST00000438773 BCE1O60756 84 aa7.44□□□□□ -1.22
TRAPPC9-202ENST00000438773 C1orf64Q8NEQ6 169 aa7.43□□□□□ -1.22
TRAPPC9-202ENST00000438773 K7EQZ3 153 aa7.43□□□□□ -1.22
TRAPPC9-202ENST00000438773 A8MUN3 132 aa7.42□□□□□ -1.22
TRAPPC9-202ENST00000438773 Q8N377 158 aa7.42□□□□□ -1.22
TRAPPC9-202ENST00000438773 MOBPQ13875 183 aa7.42□□□□□ -1.22
TRAPPC9-202ENST00000438773 SPAG11AQ6PDA7 123 aa7.41□□□□□ -1.22
TRAPPC9-202ENST00000438773 SPINK1P00995 79 aa7.41□□□□□ -1.22
TRAPPC9-202ENST00000438773 TRBV7-4A0A0J9YYF1 115 aa7.41□□□□□ -1.22
TRAPPC9-202ENST00000438773 DMBT1Q9UGM3 2413 aaPredicted RBP7.4□□□□□ -1.22
TRAPPC9-202ENST00000438773 KRTAP26-1Q6PEX3 210 aa7.4□□□□□ -1.22
TRAPPC9-202ENST00000438773 J3QL48 77 aa7.4□□□□□ -1.23
TRAPPC9-202ENST00000438773 PLA2G1BP04054 148 aaKnown RBP7.4□□□□□ -1.23
TRAPPC9-202ENST00000438773 SEC61GP60059 68 aa7.4□□□□□ -1.23
TRAPPC9-202ENST00000438773 KRTAP1-5Q9BYS1 174 aa7.39□□□□□ -1.23
TRAPPC9-202ENST00000438773 ANK3Q12955 4377 aaKnown RBP7.39□□□□□ -1.23
TRAPPC9-202ENST00000438773 ERC2-IT1O76042 136 aa7.39□□□□□ -1.23
TRAPPC9-202ENST00000438773 FLG2Q5D862 2391 aaPredicted RBP7.38□□□□□ -1.23
TRAPPC9-202ENST00000438773 TRRAPQ9Y4A5 3859 aa7.38□□□□□ -1.23
TRAPPC9-202ENST00000438773 A0A1B0GW54 56 aa7.38□□□□□ -1.23
TRAPPC9-202ENST00000438773 PKD1L1Q8TDX9 2849 aa7.37□□□□□ -1.23
TRAPPC9-202ENST00000438773 IGLV5-37A0A075B6J1 123 aa7.36□□□□□ -1.23
TRAPPC9-202ENST00000438773 KLKP1Q107X0 134 aa7.36□□□□□ -1.23
TRAPPC9-202ENST00000438773 TENM3Q9P273 2699 aa7.33□□□□□ -1.24
TRAPPC9-202ENST00000438773 TNP2Q05952 138 aa7.32□□□□□ -1.24
TRAPPC9-202ENST00000438773 IGFL1Q6UW32 110 aa7.32□□□□□ -1.24
TRAPPC9-202ENST00000438773 FBN1P35555 2871 aaKnown RBP7.32□□□□□ -1.24
TRAPPC9-202ENST00000438773 IGLV8-61A0A075B6I0 122 aa7.32□□□□□ -1.24
TRAPPC9-202ENST00000438773 PSORS1C2Q9UIG4 136 aa7.31□□□□□ -1.24
TRAPPC9-202ENST00000438773 ZNF861PO60384 105 aa7.31□□□□□ -1.24
TRAPPC9-202ENST00000438773 LCE6AA0A183 80 aa7.3□□□□□ -1.24
TRAPPC9-202ENST00000438773 hDV103S1A0JD37 113 aa7.3□□□□□ -1.24
TRAPPC9-202ENST00000438773 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.3□□□□□ -1.24
TRAPPC9-202ENST00000438773 SMR3BP02814 79 aaPredicted RBP7.3□□□□□ -1.24
TRAPPC9-202ENST00000438773 A0A1W2PNM2 257 aa7.29□□□□□ -1.24
TRAPPC9-202ENST00000438773 FP248Q71RG6 208 aaPredicted RBP7.29□□□□□ -1.24
TRAPPC9-202ENST00000438773 ANAPC11Q9NYG5 84 aa7.28□□□□□ -1.24
TRAPPC9-202ENST00000438773 IGKV2D-30A0A075B6S6 120 aa7.27□□□□□ -1.24
TRAPPC9-202ENST00000438773 IGKV2-30P06310 120 aa7.27□□□□□ -1.24
TRAPPC9-202ENST00000438773 SPACA4Q8TDM5 124 aa7.27□□□□□ -1.25
TRAPPC9-202ENST00000438773 IGLV5-48A0A075B6I7 105 aa7.26□□□□□ -1.25
TRAPPC9-202ENST00000438773 FAM229BQ4G0N7 80 aa7.26□□□□□ -1.25
TRAPPC9-202ENST00000438773 TRAV22A0A0B4J277 110 aa7.26□□□□□ -1.25
TRAPPC9-202ENST00000438773 LIMD2Q9BT23 127 aa7.25□□□□□ -1.25
TRAPPC9-202ENST00000438773 SPRR1AP35321 89 aa7.24□□□□□ -1.25
TRAPPC9-202ENST00000438773 IGLV7-43P04211 117 aa7.23□□□□□ -1.25
TRAPPC9-202ENST00000438773 TYMSOSQ8TAI1 123 aa7.23□□□□□ -1.25
TRAPPC9-202ENST00000438773 SPRR4Q96PI1 79 aa7.23□□□□□ -1.25
TRAPPC9-202ENST00000438773 COA5Q86WW8 74 aa7.2□□□□□ -1.26
TRAPPC9-202ENST00000438773 A8MWP4 228 aa7.19□□□□□ -1.26
TRAPPC9-202ENST00000438773 OCR1Q9BZK8 76 aa7.19□□□□□ -1.26
TRAPPC9-202ENST00000438773 SSBP3-AS1Q7Z2R9 100 aa7.18□□□□□ -1.26
TRAPPC9-202ENST00000438773 PRR15Q8IV56 129 aa7.15□□□□□ -1.26
TRAPPC9-202ENST00000438773 A0A1B0GU69 56 aa7.15□□□□□ -1.27
TRAPPC9-202ENST00000438773 PLAC8Q9NZF1 115 aa7.15□□□□□ -1.27
TRAPPC9-202ENST00000438773 DSCR10P59022 87 aa7.14□□□□□ -1.27
TRAPPC9-202ENST00000438773 TP53AIP1Q9HCN2 124 aa7.14□□□□□ -1.27
TRAPPC9-202ENST00000438773 PANO1I0J062 215 aa7.13□□□□□ -1.27
TRAPPC9-202ENST00000438773 ATP11AUNQ6ZP68 121 aa7.13□□□□□ -1.27
TRAPPC9-202ENST00000438773 ANK2Q01484 3957 aa7.13□□□□□ -1.27
TRAPPC9-202ENST00000438773 Q6ZR54 194 aa7.12□□□□□ -1.27
TRAPPC9-202ENST00000438773 LINC00313P59037 77 aa7.12□□□□□ -1.27
TRAPPC9-202ENST00000438773 PRR26Q8N8Z3 221 aa7.11□□□□□ -1.27
TRAPPC9-202ENST00000438773 KRTAP4-16G5E9R7 235 aaPredicted RBP7.1□□□□□ -1.27
TRAPPC9-202ENST00000438773 KRTAP10-2P60368 255 aa7.09□□□□□ -1.28
TRAPPC9-202ENST00000438773 C7orf65Q6ZTY9 151 aa7.09□□□□□ -1.28
TRAPPC9-202ENST00000438773 C8orf17Q9NRJ1 99 aa7.09□□□□□ -1.28
TRAPPC9-202ENST00000438773 Q6ZRN7 208 aaPredicted RBP7.08□□□□□ -1.28
TRAPPC9-202ENST00000438773 CSMD3Q7Z407 3707 aa7.08□□□□□ -1.28
TRAPPC9-202ENST00000438773 MRPL34Q9BQ48 92 aaKnown RBP7.08□□□□□ -1.28
TRAPPC9-202ENST00000438773 A0A1B0GVX0 72 aa7.08□□□□□ -1.28
TRAPPC9-202ENST00000438773 K7ERS5 55 aa7.08□□□□□ -1.28
TRAPPC9-202ENST00000438773 LOC101927531A0A1B0GV80 90 aa7.07□□□□□ -1.28
TRAPPC9-202ENST00000438773 ACYP2P14621 99 aa7.07□□□□□ -1.28
TRAPPC9-202ENST00000438773 SRRM2Q9UQ35 2752 aaKnown RBP7.07□□□□□ -1.28
TRAPPC9-202ENST00000438773 KRTAP7-1Q8IUC3 87 aa7.06□□□□□ -1.28
TRAPPC9-202ENST00000438773 SPRR1BP22528 89 aa7.06□□□□□ -1.28
TRAPPC9-202ENST00000438773 LINC00304Q8N9R0 145 aa7.06□□□□□ -1.28
TRAPPC9-202ENST00000438773 H3BPC8 53 aa7.05□□□□□ -1.28
TRAPPC9-202ENST00000438773 C8orf87E5RJ46 101 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 190.3 ms