RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 Q5XG85 94 aa9.7□□□□□ -0.86
GTF3A-204ENST00000438571 TRBV7-6A0A0J9YX20 115 aa9.69□□□□□ -0.86
GTF3A-204ENST00000438571 A0A1B0GWB2 263 aa9.69□□□□□ -0.86
GTF3A-204ENST00000438571 SCGB1D4Q6XE38 83 aa9.69□□□□□ -0.86
GTF3A-204ENST00000438571 RPL37P61927 97 aaKnown RBP9.68□□□□□ -0.86
GTF3A-204ENST00000438571 A6NDN8 102 aa9.67□□□□□ -0.86
GTF3A-204ENST00000438571 CFC1BP0CG36 223 aa9.67□□□□□ -0.86
GTF3A-204ENST00000438571 SMIM6P0DI80 62 aa9.67□□□□□ -0.86
GTF3A-204ENST00000438571 C14orf144Q96I85 54 aa9.67□□□□□ -0.86
GTF3A-204ENST00000438571 MUSTN1Q8IVN3 82 aa9.66□□□□□ -0.86
GTF3A-204ENST00000438571 COX8AP10176 69 aa9.64□□□□□ -0.87
GTF3A-204ENST00000438571 IFITM1P13164 125 aa9.63□□□□□ -0.87
GTF3A-204ENST00000438571 SMIM11BQ8TCY0 68 aa9.63□□□□□ -0.87
GTF3A-204ENST00000438571 C12orf57Q99622 126 aa9.63□□□□□ -0.87
GTF3A-204ENST00000438571 LOC100996750A0A140TA64 210 aa9.61□□□□□ -0.87
GTF3A-204ENST00000438571 KRTAP4-6Q9BYQ5 205 aa9.61□□□□□ -0.87
GTF3A-204ENST00000438571 M0R2T5 61 aa9.58□□□□□ -0.88
GTF3A-204ENST00000438571 DLEU1O43261 78 aa9.58□□□□□ -0.88
GTF3A-204ENST00000438571 A4D1N5 150 aa9.57□□□□□ -0.88
GTF3A-204ENST00000438571 COX6B2Q6YFQ2 88 aa9.57□□□□□ -0.88
GTF3A-204ENST00000438571 C2orf91Q6ZV80 131 aa9.57□□□□□ -0.88
GTF3A-204ENST00000438571 Q6ZVH6 145 aa9.57□□□□□ -0.88
GTF3A-204ENST00000438571 COPS9Q8WXC6 57 aa9.57□□□□□ -0.88
GTF3A-204ENST00000438571 TRAV13-2A0A0B4J235 113 aa9.55□□□□□ -0.88
GTF3A-204ENST00000438571 NHP2Q9NX24 153 aaKnown RBP9.55□□□□□ -0.88
GTF3A-204ENST00000438571 TCL1BO95988 128 aa9.54□□□□□ -0.88
GTF3A-204ENST00000438571 UQCR10Q9UDW1 63 aa9.53□□□□□ -0.88
GTF3A-204ENST00000438571 Q6ZQY7 126 aa9.52□□□□□ -0.89
GTF3A-204ENST00000438571 F8WEM9 126 aa9.51□□□□□ -0.89
GTF3A-204ENST00000438571 IGFL1Q6UW32 110 aa9.51□□□□□ -0.89
GTF3A-204ENST00000438571 LINC00575Q6W349 94 aa9.51□□□□□ -0.89
GTF3A-204ENST00000438571 HIGD1BQ9P298 99 aa9.5□□□□□ -0.89
GTF3A-204ENST00000438571 TRBV7-7A0A0K0K1E9 115 aa9.49□□□□□ -0.89
GTF3A-204ENST00000438571 CLEC2BQ92478 149 aa9.48□□□□□ -0.89
GTF3A-204ENST00000438571 HIST1H4GQ99525 98 aa9.47□□□□□ -0.89
GTF3A-204ENST00000438571 hADV29S1A0JD25 119 aa9.46□□□□□ -0.9
GTF3A-204ENST00000438571 OBSCN-AS1Q96MR7 158 aa9.46□□□□□ -0.9
GTF3A-204ENST00000438571 TSTD3H0UI37 97 aa9.45□□□□□ -0.9
GTF3A-204ENST00000438571 VAMP3Q15836 100 aa9.44□□□□□ -0.9
GTF3A-204ENST00000438571 Q6JHZ5 121 aa9.44□□□□□ -0.9
GTF3A-204ENST00000438571 OCIAD2Q56VL3 154 aa9.42□□□□□ -0.9
GTF3A-204ENST00000438571 Q6Q795 121 aa9.42□□□□□ -0.9
GTF3A-204ENST00000438571 Q75L30 129 aa9.42□□□□□ -0.9
GTF3A-204ENST00000438571 HSD52Q0P140 79 aa9.41□□□□□ -0.9
GTF3A-204ENST00000438571 CEND1Q8N111 149 aa9.41□□□□□ -0.9
GTF3A-204ENST00000438571 H3BUT2 72 aa9.4□□□□□ -0.9
GTF3A-204ENST00000438571 FXYD2P54710 66 aa9.39□□□□□ -0.91
GTF3A-204ENST00000438571 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.38□□□□□ -0.91
GTF3A-204ENST00000438571 ATP11AUNQ6ZP68 121 aa9.38□□□□□ -0.91
GTF3A-204ENST00000438571 PCP4L1A6NKN8 68 aa9.36□□□□□ -0.91
GTF3A-204ENST00000438571 USH2AO75445 5202 aa9.36□□□□□ -0.91
GTF3A-204ENST00000438571 CFC1P0CG37 223 aa9.35□□□□□ -0.91
GTF3A-204ENST00000438571 BVES-AS1Q5T3Y7 98 aa9.35□□□□□ -0.91
GTF3A-204ENST00000438571 SSPOA2VEC9 5147 aa9.35□□□□□ -0.91
GTF3A-204ENST00000438571 LST1O00453 97 aa9.34□□□□□ -0.91
GTF3A-204ENST00000438571 Q96NJ1 140 aa9.34□□□□□ -0.91
GTF3A-204ENST00000438571 SNHG12Q9BXW3 62 aa9.32□□□□□ -0.92
GTF3A-204ENST00000438571 K7ERJ3 54 aa9.31□□□□□ -0.92
GTF3A-204ENST00000438571 PPDPFLQ8WWR9 84 aa9.31□□□□□ -0.92
GTF3A-204ENST00000438571 C20orf166-AS1Q96NR2 134 aa9.29□□□□□ -0.92
GTF3A-204ENST00000438571 KRTAP9-8Q9BYQ0 159 aa9.29□□□□□ -0.92
GTF3A-204ENST00000438571 A0A0B4J2C4 111 aa9.28□□□□□ -0.92
GTF3A-204ENST00000438571 TMEM238LA0A1B0GVL6 79 aa9.28□□□□□ -0.92
GTF3A-204ENST00000438571 A6NJY4 79 aa9.28□□□□□ -0.92
GTF3A-204ENST00000438571 M0R143 59 aa9.28□□□□□ -0.92
GTF3A-204ENST00000438571 BATFQ16520 125 aa9.28□□□□□ -0.92
GTF3A-204ENST00000438571 RAB37Q96AX2 223 aa9.28□□□□□ -0.92
GTF3A-204ENST00000438571 FAM218AQ96MZ4 157 aa9.28□□□□□ -0.92
GTF3A-204ENST00000438571 A8MUU9 505 aa9.27□□□□□ -0.93
GTF3A-204ENST00000438571 A0A087WSZ3 146 aa9.24□□□□□ -0.93
GTF3A-204ENST00000438571 SS18L2Q9UHA2 77 aa9.24□□□□□ -0.93
GTF3A-204ENST00000438571 PRO1854Q9UHT4 67 aa9.24□□□□□ -0.93
GTF3A-204ENST00000438571 DSCR10P59022 87 aa9.23□□□□□ -0.93
GTF3A-204ENST00000438571 NDUFV3P56181 108 aaKnown RBP9.22□□□□□ -0.93
GTF3A-204ENST00000438571 TEN1Q86WV5 123 aa9.22□□□□□ -0.93
GTF3A-204ENST00000438571 KRTAP16-1A8MUX0 517 aa9.19□□□□□ -0.94
GTF3A-204ENST00000438571 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.19□□□□□ -0.94
GTF3A-204ENST00000438571 NAA38Q9BRA0 125 aaKnown RBP9.18□□□□□ -0.94
GTF3A-204ENST00000438571 A0A1W2PNM2 257 aa9.16□□□□□ -0.94
GTF3A-204ENST00000438571 TRBV20-1A0A075B6N2 111 aa9.15□□□□□ -0.94
GTF3A-204ENST00000438571 H0YGX0 51 aa9.15□□□□□ -0.94
GTF3A-204ENST00000438571 H3BMG7 143 aa9.15□□□□□ -0.94
GTF3A-204ENST00000438571 TRIAP1O43715 76 aa9.15□□□□□ -0.94
GTF3A-204ENST00000438571 SIGMAR1Q99720 223 aa9.15□□□□□ -0.94
GTF3A-204ENST00000438571 KRTAP9-7A8MTY7 169 aa9.14□□□□□ -0.95
GTF3A-204ENST00000438571 TAX1BP3O14907 124 aa9.14□□□□□ -0.95
GTF3A-204ENST00000438571 MT2AP02795 61 aa9.13□□□□□ -0.95
GTF3A-204ENST00000438571 PSMB2P49721 201 aa9.13□□□□□ -0.95
GTF3A-204ENST00000438571 FABP2P12104 132 aa9.12□□□□□ -0.95
GTF3A-204ENST00000438571 FCGBPQ9Y6R7 5405 aaPredicted RBP9.1□□□□□ -0.95
GTF3A-204ENST00000438571 A0A1B0GV72 72 aa9.1□□□□□ -0.95
GTF3A-204ENST00000438571 NOTCH2NLQ7Z3S9 236 aa9.1□□□□□ -0.95
GTF3A-204ENST00000438571 COL5A1-AS1Q5SY13 56 aa9.09□□□□□ -0.95
GTF3A-204ENST00000438571 C9orf118A6NHY6 69 aa9.08□□□□□ -0.96
GTF3A-204ENST00000438571 SNCGO76070 127 aa9.08□□□□□ -0.96
GTF3A-204ENST00000438571 MT1FP04733 61 aa9.08□□□□□ -0.96
GTF3A-204ENST00000438571 FAM236DA0A1B0GTK5 79 aa9.07□□□□□ -0.96
GTF3A-204ENST00000438571 IGKV4-1P06312 121 aa9.07□□□□□ -0.96
GTF3A-204ENST00000438571 FAM236CP0DP71 79 aa9.07□□□□□ -0.96
GTF3A-204ENST00000438571 HRES1P13985 223 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms