RNA–Protein interactions for RNA: ENST00000435706.6

TOP2B-204, Transcript of DNA topoisomerase II beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOP2B, Length 5,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-204ENST00000435706 KRTAP29-1A8MX34 341 aaPredicted RBP13.56□□□□□ -0.24
TOP2B-204ENST00000435706 ATRQ13535 2644 aa13.55□□□□□ -0.24
TOP2B-204ENST00000435706 ITPR3Q14573 2671 aa13.53□□□□□ -0.24
TOP2B-204ENST00000435706 Q6ZR54 194 aa13.53□□□□□ -0.24
TOP2B-204ENST00000435706 J3QL48 77 aa13.53□□□□□ -0.24
TOP2B-204ENST00000435706 KRTAP4-16G5E9R7 235 aaPredicted RBP13.51□□□□□ -0.25
TOP2B-204ENST00000435706 CHD9Q3L8U1 2897 aa13.49□□□□□ -0.25
TOP2B-204ENST00000435706 ASB16-AS1Q495Z4 193 aa13.48□□□□□ -0.25
TOP2B-204ENST00000435706 FLNBO75369 2602 aaKnown RBP13.43□□□□□ -0.26
TOP2B-204ENST00000435706 KRTAP1-5Q9BYS1 174 aa13.42□□□□□ -0.26
TOP2B-204ENST00000435706 CAMK2N1Q7Z7J9 78 aa13.4□□□□□ -0.26
TOP2B-204ENST00000435706 Q6ZSA8 131 aa13.39□□□□□ -0.27
TOP2B-204ENST00000435706 AKAP13Q12802 2813 aa13.39□□□□□ -0.27
TOP2B-204ENST00000435706 S4R3F8 94 aa13.38□□□□□ -0.27
TOP2B-204ENST00000435706 ROMO1P60602 79 aa13.38□□□□□ -0.27
TOP2B-204ENST00000435706 A6NN06 94 aa13.38□□□□□ -0.27
TOP2B-204ENST00000435706 LINC00483Q53H64 154 aa13.36□□□□□ -0.27
TOP2B-204ENST00000435706 CHD6Q8TD26 2715 aa13.36□□□□□ -0.27
TOP2B-204ENST00000435706 RPL37P61927 97 aaKnown RBP13.35□□□□□ -0.27
TOP2B-204ENST00000435706 LCE6AA0A183 80 aa13.34□□□□□ -0.27
TOP2B-204ENST00000435706 H1FX-AS1Q4G0G2 97 aa13.33□□□□□ -0.27
TOP2B-204ENST00000435706 SPATA8Q6RVD6 105 aa13.31□□□□□ -0.28
TOP2B-204ENST00000435706 HTTP42858 3142 aa13.3□□□□□ -0.28
TOP2B-204ENST00000435706 CENPEQ02224 2701 aa13.3□□□□□ -0.28
TOP2B-204ENST00000435706 A0A0A0MQY5 61 aa13.29□□□□□ -0.28
TOP2B-204ENST00000435706 MAST4O15021 2626 aa13.29□□□□□ -0.28
TOP2B-204ENST00000435706 GCN1Q92616 2671 aaKnown RBP13.26□□□□□ -0.29
TOP2B-204ENST00000435706 UNC79Q9P2D8 2635 aa13.22□□□□□ -0.29
TOP2B-204ENST00000435706 LAMA2P24043 3122 aaKnown RBP13.2□□□□□ -0.3
TOP2B-204ENST00000435706 MGAQ8IWI9 3026 aa13.2□□□□□ -0.3
TOP2B-204ENST00000435706 A0A087X002 238 aa13.18□□□□□ -0.3
TOP2B-204ENST00000435706 NOTCH2NLQ7Z3S9 236 aa13.18□□□□□ -0.3
TOP2B-204ENST00000435706 A8MU10 97 aa13.15□□□□□ -0.3
TOP2B-204ENST00000435706 PANO1I0J062 215 aa13.15□□□□□ -0.3
TOP2B-204ENST00000435706 TRANK1O15050 2925 aa13.14□□□□□ -0.31
TOP2B-204ENST00000435706 NBEAL1Q6ZS30 2694 aa13.13□□□□□ -0.31
TOP2B-204ENST00000435706 MKI67P46013 3256 aaKnown RBP13.13□□□□□ -0.31
TOP2B-204ENST00000435706 CFAP46Q8IYW2 2715 aa13.13□□□□□ -0.31
TOP2B-204ENST00000435706 RANBP2P49792 3224 aaKnown RBP13.12□□□□□ -0.31
TOP2B-204ENST00000435706 R4GN34 69 aa13.11□□□□□ -0.31
TOP2B-204ENST00000435706 ADM2Q7Z4H4 148 aa13.07□□□□□ -0.32
TOP2B-204ENST00000435706 HELZ2Q9BYK8 2649 aaKnown RBP13.07□□□□□ -0.32
TOP2B-204ENST00000435706 KRTAP25-1Q3LHN0 102 aa13.05□□□□□ -0.32
TOP2B-204ENST00000435706 NBEAL2Q6ZNJ1 2754 aa13.02□□□□□ -0.32
TOP2B-204ENST00000435706 KRTAP11-1Q8IUC1 163 aa13□□□□□ -0.33
TOP2B-204ENST00000435706 KRTAP7-1Q8IUC3 87 aa13□□□□□ -0.33
TOP2B-204ENST00000435706 TRIOO75962 3097 aa13□□□□□ -0.33
TOP2B-204ENST00000435706 KRTAP10-1P60331 282 aa12.97□□□□□ -0.33
TOP2B-204ENST00000435706 NOTCH1P46531 2555 aa12.95□□□□□ -0.34
TOP2B-204ENST00000435706 KRTAP10-2P60368 255 aa12.94□□□□□ -0.34
TOP2B-204ENST00000435706 LAMA3Q16787 3333 aa12.94□□□□□ -0.34
TOP2B-204ENST00000435706 WDFY4Q6ZS81 3184 aa12.93□□□□□ -0.34
TOP2B-204ENST00000435706 FRYQ5TBA9 3013 aa12.93□□□□□ -0.34
TOP2B-204ENST00000435706 M0QZ58 72 aa12.92□□□□□ -0.34
TOP2B-204ENST00000435706 TEX15Q9BXT5 2789 aa12.91□□□□□ -0.34
TOP2B-204ENST00000435706 STAB1Q9NY15 2570 aa12.9□□□□□ -0.34
TOP2B-204ENST00000435706 KRTAP16-1A8MUX0 517 aa12.88□□□□□ -0.35
TOP2B-204ENST00000435706 DMBT1Q9UGM3 2413 aaPredicted RBP12.88□□□□□ -0.35
TOP2B-204ENST00000435706 ZNF292O60281 2723 aa12.85□□□□□ -0.35
TOP2B-204ENST00000435706 FREM2Q5SZK8 3169 aa12.82□□□□□ -0.36
TOP2B-204ENST00000435706 FLG2Q5D862 2391 aaPredicted RBP12.82□□□□□ -0.36
TOP2B-204ENST00000435706 BRCA2P51587 3418 aa12.8□□□□□ -0.36
TOP2B-204ENST00000435706 MAP1AP78559 2803 aaPredicted RBP12.8□□□□□ -0.36
TOP2B-204ENST00000435706 VPS13AQ96RL7 3174 aa12.77□□□□□ -0.37
TOP2B-204ENST00000435706 UNC80Q8N2C7 3258 aa12.76□□□□□ -0.37
TOP2B-204ENST00000435706 M0R2T5 61 aa12.75□□□□□ -0.37
TOP2B-204ENST00000435706 KRTAP13-1Q8IUC0 172 aa12.75□□□□□ -0.37
TOP2B-204ENST00000435706 COL6A5A8TX70 2615 aa12.73□□□□□ -0.37
TOP2B-204ENST00000435706 DSPP15924 2871 aaKnown RBP12.73□□□□□ -0.37
TOP2B-204ENST00000435706 SETXQ7Z333 2677 aaKnown RBP12.72□□□□□ -0.37
TOP2B-204ENST00000435706 TEP1Q99973 2627 aaKnown RBP12.71□□□□□ -0.37
TOP2B-204ENST00000435706 SEC61BP60468 96 aaKnown RBP12.69□□□□□ -0.38
TOP2B-204ENST00000435706 KALRNO60229 2985 aa12.69□□□□□ -0.38
TOP2B-204ENST00000435706 NDUFAF8A1L188 74 aa12.68□□□□□ -0.38
TOP2B-204ENST00000435706 XIRP2A4UGR9 3374 aa12.66□□□□□ -0.38
TOP2B-204ENST00000435706 NBEAQ8NFP9 2946 aa12.66□□□□□ -0.38
TOP2B-204ENST00000435706 Q6ZRN7 208 aaPredicted RBP12.66□□□□□ -0.38
TOP2B-204ENST00000435706 Q5VSD8 79 aa12.64□□□□□ -0.39
TOP2B-204ENST00000435706 BAHCC1Q9P281 2608 aa12.61□□□□□ -0.39
TOP2B-204ENST00000435706 RPS29P62273 56 aaKnown RBP12.61□□□□□ -0.39
TOP2B-204ENST00000435706 KRTAP13-2Q52LG2 175 aa12.59□□□□□ -0.39
TOP2B-204ENST00000435706 PRUNE2Q8WUY3 3088 aa12.59□□□□□ -0.39
TOP2B-204ENST00000435706 UBR5O95071 2799 aaPredicted RBP12.58□□□□□ -0.39
TOP2B-204ENST00000435706 CELSR3Q9NYQ7 3312 aa12.57□□□□□ -0.4
TOP2B-204ENST00000435706 ITPR1Q14643 2758 aa12.54□□□□□ -0.4
TOP2B-204ENST00000435706 A8MUU9 505 aa12.53□□□□□ -0.4
TOP2B-204ENST00000435706 STAB2Q8WWQ8 2551 aa12.5□□□□□ -0.41
TOP2B-204ENST00000435706 PLAC4Q8WY50 150 aa12.43□□□□□ -0.42
TOP2B-204ENST00000435706 IGSF10Q6WRI0 2623 aa12.42□□□□□ -0.42
TOP2B-204ENST00000435706 CDH23Q9H251 3354 aa12.41□□□□□ -0.42
TOP2B-204ENST00000435706 DNAH14Q0VDD8 3507 aa12.36□□□□□ -0.43
TOP2B-204ENST00000435706 NSD1Q96L73 2696 aaPredicted RBP12.34□□□□□ -0.43
TOP2B-204ENST00000435706 APCP25054 2843 aa12.34□□□□□ -0.43
TOP2B-204ENST00000435706 VCANP13611 3396 aa12.34□□□□□ -0.43
TOP2B-204ENST00000435706 ASH1LQ9NR48 2969 aaKnown RBP12.33□□□□□ -0.44
TOP2B-204ENST00000435706 LAMA1P25391 3075 aa12.32□□□□□ -0.44
TOP2B-204ENST00000435706 ADGRG4Q8IZF6 3080 aa12.29□□□□□ -0.44
TOP2B-204ENST00000435706 C20orf166-AS1Q96NR2 134 aa12.28□□□□□ -0.44
TOP2B-204ENST00000435706 LRBAP50851 2863 aa12.28□□□□□ -0.44
TOP2B-204ENST00000435706 DMXL2Q8TDJ6 3036 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms