RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 HUWE1Q7Z6Z7 4374 aaKnown RBP4.76□□□□□ -1.65
COL17A1-204ENST00000433822 TRAV7A0A075B6U4 112 aa4.76□□□□□ -1.65
COL17A1-204ENST00000433822 ETDCA0A1B0GVM5 59 aa4.76□□□□□ -1.65
COL17A1-204ENST00000433822 TMEM258P61165 79 aa4.76□□□□□ -1.65
COL17A1-204ENST00000433822 MRPL55Q7Z7F7 128 aaKnown RBP4.76□□□□□ -1.65
COL17A1-204ENST00000433822 Q8N377 158 aa4.76□□□□□ -1.65
COL17A1-204ENST00000433822 SS18L2Q9UHA2 77 aa4.76□□□□□ -1.65
COL17A1-204ENST00000433822 A0A087WVE0 104 aa4.75□□□□□ -1.65
COL17A1-204ENST00000433822 C16orf90A8MZG2 172 aa4.75□□□□□ -1.65
COL17A1-204ENST00000433822 RPS28P62857 69 aaKnown RBP4.75□□□□□ -1.65
COL17A1-204ENST00000433822 LCE1AQ5T7P2 110 aa4.75□□□□□ -1.65
COL17A1-204ENST00000433822 RPL37AP8A6NKH3 93 aa4.74□□□□□ -1.65
COL17A1-204ENST00000433822 M0R2N4 97 aa4.74□□□□□ -1.65
COL17A1-204ENST00000433822 FAM19A1Q7Z5A9 133 aa4.74□□□□□ -1.65
COL17A1-204ENST00000433822 KRTAP7-1Q8IUC3 87 aa4.74□□□□□ -1.65
COL17A1-204ENST00000433822 SPRR4Q96PI1 79 aa4.74□□□□□ -1.65
COL17A1-204ENST00000433822 B9D2Q9BPU9 175 aa4.74□□□□□ -1.65
COL17A1-204ENST00000433822 APLNQ9ULZ1 77 aa4.74□□□□□ -1.65
COL17A1-204ENST00000433822 LCE6AA0A183 80 aa4.73□□□□□ -1.65
COL17A1-204ENST00000433822 H0Y9J4 135 aa4.73□□□□□ -1.65
COL17A1-204ENST00000433822 ERC2-IT1O76042 136 aa4.73□□□□□ -1.65
COL17A1-204ENST00000433822 FUSP35637 526 aaKnown RBP eCLIP4.73□□□□□ -1.65
COL17A1-204ENST00000433822 HAMPP81172 84 aa4.73□□□□□ -1.65
COL17A1-204ENST00000433822 CASC10Q5T4H9 136 aa4.73□□□□□ -1.65
COL17A1-204ENST00000433822 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.73□□□□□ -1.65
COL17A1-204ENST00000433822 Q9BRP9 147 aa4.73□□□□□ -1.65
COL17A1-204ENST00000433822 IGLV8-61A0A075B6I0 122 aa4.72□□□□□ -1.65
COL17A1-204ENST00000433822 REG3GQ6UW15 175 aa4.72□□□□□ -1.65
COL17A1-204ENST00000433822 Q8NBF4 154 aa4.72□□□□□ -1.65
COL17A1-204ENST00000433822 HECTD4Q9Y4D8 3996 aa4.72□□□□□ -1.65
COL17A1-204ENST00000433822 NUPR2A6NF83 97 aa4.71□□□□□ -1.66
COL17A1-204ENST00000433822 KLKP1Q107X0 134 aa4.71□□□□□ -1.66
COL17A1-204ENST00000433822 NREPQ16612 68 aa4.71□□□□□ -1.66
COL17A1-204ENST00000433822 LINC00474Q9P2X8 69 aa4.71□□□□□ -1.66
COL17A1-204ENST00000433822 FAM168BA1KXE4 195 aa4.7□□□□□ -1.66
COL17A1-204ENST00000433822 EPM2AB3EWF7 344 aa4.7□□□□□ -1.66
COL17A1-204ENST00000433822 NDUFC1O43677 76 aa4.7□□□□□ -1.66
COL17A1-204ENST00000433822 C1orf137Q5JT78 98 aa4.7□□□□□ -1.66
COL17A1-204ENST00000433822 C3orf84H3BNL1 204 aa4.69□□□□□ -1.66
COL17A1-204ENST00000433822 SPRR1BP22528 89 aa4.69□□□□□ -1.66
COL17A1-204ENST00000433822 FAM19A5Q7Z5A7 132 aaPredicted RBP4.69□□□□□ -1.66
COL17A1-204ENST00000433822 UBE2DNLQ8IWF7 75 aa4.69□□□□□ -1.66
COL17A1-204ENST00000433822 C9orf163Q8N9P6 203 aa4.69□□□□□ -1.66
COL17A1-204ENST00000433822 KRTAP1-5Q9BYS1 174 aa4.69□□□□□ -1.66
COL17A1-204ENST00000433822 A0A096LNI7 61 aa4.68□□□□□ -1.66
COL17A1-204ENST00000433822 A0A1W2PNM2 257 aa4.68□□□□□ -1.66
COL17A1-204ENST00000433822 J3KT08 172 aa4.68□□□□□ -1.66
COL17A1-204ENST00000433822 BPY2O14599 106 aa4.68□□□□□ -1.66
COL17A1-204ENST00000433822 PSCAO43653 123 aa4.68□□□□□ -1.66
COL17A1-204ENST00000433822 IGKV4-1P06312 121 aa4.68□□□□□ -1.66
COL17A1-204ENST00000433822 KRTAP10-7P60409 375 aaPredicted RBP4.68□□□□□ -1.66
COL17A1-204ENST00000433822 ALMS1Q8TCU4 4167 aa4.68□□□□□ -1.66
COL17A1-204ENST00000433822 HERC1Q15751 4861 aa4.67□□□□□ -1.66
COL17A1-204ENST00000433822 DNAH10Q8IVF4 4471 aa4.67□□□□□ -1.66
COL17A1-204ENST00000433822 F8WEM9 126 aa4.67□□□□□ -1.66
COL17A1-204ENST00000433822 UBE2BP63146 152 aa4.67□□□□□ -1.66
COL17A1-204ENST00000433822 SMIM29Q86T20 159 aa4.67□□□□□ -1.66
COL17A1-204ENST00000433822 UBR4Q5T4S7 5183 aa4.66□□□□□ -1.66
COL17A1-204ENST00000433822 NBDYA0A0U1RRE5 68 aa4.66□□□□□ -1.66
COL17A1-204ENST00000433822 LRCOL1A6NCL2 159 aa4.66□□□□□ -1.66
COL17A1-204ENST00000433822 ATP5EP56381 51 aaPredicted RBP4.66□□□□□ -1.66
COL17A1-204ENST00000433822 DEFB105AQ8NG35 78 aa4.66□□□□□ -1.66
COL17A1-204ENST00000433822 Q6ZRN7 208 aaPredicted RBP4.65□□□□□ -1.67
COL17A1-204ENST00000433822 Q8N9P0 234 aaPredicted RBP4.65□□□□□ -1.67
COL17A1-204ENST00000433822 A0A1W2PNN7 141 aa4.64□□□□□ -1.67
COL17A1-204ENST00000433822 H7BZZ5 65 aa4.64□□□□□ -1.67
COL17A1-204ENST00000433822 C20orf197Q8N268 126 aa4.64□□□□□ -1.67
COL17A1-204ENST00000433822 ST20-AS1Q8NBB2 130 aa4.64□□□□□ -1.67
COL17A1-204ENST00000433822 DPH3Q96FX2 82 aa4.64□□□□□ -1.67
COL17A1-204ENST00000433822 OCR1Q9BZK8 76 aa4.64□□□□□ -1.67
COL17A1-204ENST00000433822 CYSTM1Q9H1C7 97 aa4.64□□□□□ -1.67
COL17A1-204ENST00000433822 RPL37AP61513 92 aaKnown RBP4.63□□□□□ -1.67
COL17A1-204ENST00000433822 KRTAP5-11Q6L8G4 156 aa4.62□□□□□ -1.67
COL17A1-204ENST00000433822 IGFL1Q6UW32 110 aa4.62□□□□□ -1.67
COL17A1-204ENST00000433822 SCXQ7RTU7 201 aa4.62□□□□□ -1.67
COL17A1-204ENST00000433822 SVIPQ8NHG7 77 aa4.62□□□□□ -1.67
COL17A1-204ENST00000433822 FAM236DA0A1B0GTK5 79 aa4.61□□□□□ -1.67
COL17A1-204ENST00000433822 FAM236CP0DP71 79 aa4.61□□□□□ -1.67
COL17A1-204ENST00000433822 KRTAP13-1Q8IUC0 172 aa4.61□□□□□ -1.67
COL17A1-204ENST00000433822 IGKV2-24A0A0C4DH68 120 aa4.6□□□□□ -1.67
COL17A1-204ENST00000433822 A0A0U1RQV1 116 aa4.6□□□□□ -1.67
COL17A1-204ENST00000433822 DSCR10P59022 87 aa4.6□□□□□ -1.67
COL17A1-204ENST00000433822 TMEM254Q8TBM7 123 aa4.6□□□□□ -1.67
COL17A1-204ENST00000433822 SERP1Q9Y6X1 66 aa4.6□□□□□ -1.67
COL17A1-204ENST00000433822 KMT2AQ03164 3969 aa4.6□□□□□ -1.67
COL17A1-204ENST00000433822 UBE2AP49459 152 aa4.59□□□□□ -1.67
COL17A1-204ENST00000433822 KRTAP10-6P60371 365 aaPredicted RBP4.59□□□□□ -1.67
COL17A1-204ENST00000433822 PRLHP81277 87 aa4.59□□□□□ -1.67
COL17A1-204ENST00000433822 SPACA4Q8TDM5 124 aa4.59□□□□□ -1.67
COL17A1-204ENST00000433822 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.58□□□□□ -1.68
COL17A1-204ENST00000433822 Q6ZR54 194 aa4.58□□□□□ -1.68
COL17A1-204ENST00000433822 PHF5AQ7RTV0 110 aaKnown RBP4.58□□□□□ -1.68
COL17A1-204ENST00000433822 HIGD2AQ9BW72 106 aa4.58□□□□□ -1.68
COL17A1-204ENST00000433822 A0A087WTM6 91 aa4.57□□□□□ -1.68
COL17A1-204ENST00000433822 HCG22E2RYF7 251 aa4.57□□□□□ -1.68
COL17A1-204ENST00000433822 LINC00483Q53H64 154 aa4.57□□□□□ -1.68
COL17A1-204ENST00000433822 C5orf47Q569G3 176 aa4.57□□□□□ -1.68
COL17A1-204ENST00000433822 Q8N9L7 120 aa4.57□□□□□ -1.68
COL17A1-204ENST00000433822 ZNF706Q9Y5V0 76 aaPredicted RBP4.57□□□□□ -1.68
COL17A1-204ENST00000433822 PKHD1P08F94 4074 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms