RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 A0A087WTM6 91 aa8.03□□□□□ -1.12
DDX56-204ENST00000431640 SMIM20Q8N5G0 67 aa8.03□□□□□ -1.12
DDX56-204ENST00000431640 PRLHP81277 87 aa8.02□□□□□ -1.13
DDX56-204ENST00000431640 SMIM29Q86T20 159 aa8.02□□□□□ -1.13
DDX56-204ENST00000431640 Q8NBF4 154 aa8.02□□□□□ -1.13
DDX56-204ENST00000431640 SPRR4Q96PI1 79 aa8.02□□□□□ -1.13
DDX56-204ENST00000431640 CRYGAP11844 174 aa8.01□□□□□ -1.13
DDX56-204ENST00000431640 C1orf134Q5TEV5 83 aa8.01□□□□□ -1.13
DDX56-204ENST00000431640 HIGD2AQ9BW72 106 aa8.01□□□□□ -1.13
DDX56-204ENST00000431640 IGLV8-61A0A075B6I0 122 aa8.01□□□□□ -1.13
DDX56-204ENST00000431640 A0A1W2PNM2 257 aa8.01□□□□□ -1.13
DDX56-204ENST00000431640 EPM2AB3EWF7 344 aa8.01□□□□□ -1.13
DDX56-204ENST00000431640 BPY2O14599 106 aa8□□□□□ -1.13
DDX56-204ENST00000431640 SPRR1BP22528 89 aa7.99□□□□□ -1.13
DDX56-204ENST00000431640 UBE2AP49459 152 aa7.99□□□□□ -1.13
DDX56-204ENST00000431640 SPACA4Q8TDM5 124 aa7.99□□□□□ -1.13
DDX56-204ENST00000431640 DNAH11Q96DT5 4516 aa7.99□□□□□ -1.13
DDX56-204ENST00000431640 HECTD4Q9Y4D8 3996 aa7.98□□□□□ -1.13
DDX56-204ENST00000431640 TRAV7A0A075B6U4 112 aa7.97□□□□□ -1.13
DDX56-204ENST00000431640 SCXQ7RTU7 201 aa7.97□□□□□ -1.13
DDX56-204ENST00000431640 KRTAP11-1Q8IUC1 163 aa7.97□□□□□ -1.13
DDX56-204ENST00000431640 SS18L2Q9UHA2 77 aa7.96□□□□□ -1.14
DDX56-204ENST00000431640 PKD1P98161 4303 aa7.96□□□□□ -1.14
DDX56-204ENST00000431640 PANO1I0J062 215 aa7.94□□□□□ -1.14
DDX56-204ENST00000431640 IGFL1Q6UW32 110 aa7.94□□□□□ -1.14
DDX56-204ENST00000431640 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.93□□□□□ -1.14
DDX56-204ENST00000431640 IGKV4-1P06312 121 aa7.93□□□□□ -1.14
DDX56-204ENST00000431640 KRTAP13-1Q8IUC0 172 aa7.93□□□□□ -1.14
DDX56-204ENST00000431640 KRTAP10-2P60368 255 aa7.91□□□□□ -1.14
DDX56-204ENST00000431640 DNAH5Q8TE73 4624 aa7.91□□□□□ -1.14
DDX56-204ENST00000431640 IGLV5-52A0A0A0MRZ9 124 aa7.9□□□□□ -1.14
DDX56-204ENST00000431640 PLAC8Q9NZF1 115 aa7.9□□□□□ -1.14
DDX56-204ENST00000431640 PKHD1P08F94 4074 aa7.88□□□□□ -1.15
DDX56-204ENST00000431640 A0A1B0GVY2 172 aa7.88□□□□□ -1.15
DDX56-204ENST00000431640 Q8N9L7 120 aa7.88□□□□□ -1.15
DDX56-204ENST00000431640 ZNF706Q9Y5V0 76 aaPredicted RBP7.88□□□□□ -1.15
DDX56-204ENST00000431640 TMEM258P61165 79 aa7.86□□□□□ -1.15
DDX56-204ENST00000431640 RPL37AP61513 92 aaKnown RBP7.86□□□□□ -1.15
DDX56-204ENST00000431640 A0A087WSZ3 146 aa7.84□□□□□ -1.15
DDX56-204ENST00000431640 DSCR10P59022 87 aa7.84□□□□□ -1.15
DDX56-204ENST00000431640 C20orf197Q8N268 126 aa7.84□□□□□ -1.15
DDX56-204ENST00000431640 PSORS1C2Q9UIG4 136 aa7.84□□□□□ -1.15
DDX56-204ENST00000431640 A0A0G2JQZ4 141 aa7.83□□□□□ -1.16
DDX56-204ENST00000431640 LINC00483Q53H64 154 aa7.83□□□□□ -1.16
DDX56-204ENST00000431640 LINC00336Q6ZUF6 198 aa7.83□□□□□ -1.16
DDX56-204ENST00000431640 ZNF861PO60384 105 aa7.82□□□□□ -1.16
DDX56-204ENST00000431640 KLKP1Q107X0 134 aa7.82□□□□□ -1.16
DDX56-204ENST00000431640 OCR1Q9BZK8 76 aa7.8□□□□□ -1.16
DDX56-204ENST00000431640 NDUFC1O43677 76 aa7.8□□□□□ -1.16
DDX56-204ENST00000431640 CYSTM1Q9H1C7 97 aa7.8□□□□□ -1.16
DDX56-204ENST00000431640 K7EQZ3 153 aa7.79□□□□□ -1.16
DDX56-204ENST00000431640 KRTAP10-1P60331 282 aa7.79□□□□□ -1.16
DDX56-204ENST00000431640 DYNC1H1Q14204 4646 aaKnown RBP7.78□□□□□ -1.16
DDX56-204ENST00000431640 RPS28P62857 69 aaKnown RBP7.78□□□□□ -1.16
DDX56-204ENST00000431640 HCG22E2RYF7 251 aa7.77□□□□□ -1.17
DDX56-204ENST00000431640 J3KT08 172 aa7.77□□□□□ -1.17
DDX56-204ENST00000431640 FAM30AQ9NZY2 134 aa7.77□□□□□ -1.17
DDX56-204ENST00000431640 LRP1BQ9NZR2 4599 aa7.77□□□□□ -1.17
DDX56-204ENST00000431640 LINC00472Q9H8W2 130 aa7.76□□□□□ -1.17
DDX56-204ENST00000431640 DNAH8Q96JB1 4490 aa7.76□□□□□ -1.17
DDX56-204ENST00000431640 EPPK1P58107 5090 aaKnown RBP7.76□□□□□ -1.17
DDX56-204ENST00000431640 IGLV9-49A0A0B4J1Y8 123 aa7.76□□□□□ -1.17
DDX56-204ENST00000431640 IGLV7-43P04211 117 aa7.75□□□□□ -1.17
DDX56-204ENST00000431640 DEFB116Q30KQ4 102 aa7.75□□□□□ -1.17
DDX56-204ENST00000431640 TMEM254Q8TBM7 123 aa7.75□□□□□ -1.17
DDX56-204ENST00000431640 A8MWP4 228 aa7.73□□□□□ -1.17
DDX56-204ENST00000431640 H7BZZ5 65 aa7.73□□□□□ -1.17
DDX56-204ENST00000431640 Q6ZSA8 131 aa7.73□□□□□ -1.17
DDX56-204ENST00000431640 SNURFQ9Y675 71 aa7.73□□□□□ -1.17
DDX56-204ENST00000431640 PRR15Q8IV56 129 aa7.72□□□□□ -1.17
DDX56-204ENST00000431640 NDUFB1O75438 58 aa7.71□□□□□ -1.18
DDX56-204ENST00000431640 C5orf47Q569G3 176 aa7.71□□□□□ -1.18
DDX56-204ENST00000431640 A0A0U1RQV1 116 aa7.7□□□□□ -1.18
DDX56-204ENST00000431640 FAM236DA0A1B0GTK5 79 aa7.7□□□□□ -1.18
DDX56-204ENST00000431640 FAM236CP0DP71 79 aa7.7□□□□□ -1.18
DDX56-204ENST00000431640 CIRBP-AS1Q8TBR5 109 aa7.7□□□□□ -1.18
DDX56-204ENST00000431640 APOBP04114 4563 aaKnown RBP7.69□□□□□ -1.18
DDX56-204ENST00000431640 ATP5EP56381 51 aaPredicted RBP7.68□□□□□ -1.18
DDX56-204ENST00000431640 MOBPQ13875 183 aa7.68□□□□□ -1.18
DDX56-204ENST00000431640 KRTAP29-1A8MX34 341 aaPredicted RBP7.67□□□□□ -1.18
DDX56-204ENST00000431640 CASC2Q6XLA1 102 aa7.67□□□□□ -1.18
DDX56-204ENST00000431640 WFDC13Q8IUB5 93 aa7.67□□□□□ -1.18
DDX56-204ENST00000431640 SSBP3-AS1Q7Z2R9 100 aa7.66□□□□□ -1.18
DDX56-204ENST00000431640 CD164Q04900 197 aa7.64□□□□□ -1.19
DDX56-204ENST00000431640 HRCT1Q6UXD1 115 aa7.63□□□□□ -1.19
DDX56-204ENST00000431640 Q96NJ1 140 aa7.63□□□□□ -1.19
DDX56-204ENST00000431640 ANAPC11Q9NYG5 84 aa7.63□□□□□ -1.19
DDX56-204ENST00000431640 SERP1Q9Y6X1 66 aa7.63□□□□□ -1.19
DDX56-204ENST00000431640 CDK2AP2O75956 126 aa7.62□□□□□ -1.19
DDX56-204ENST00000431640 MP68P56378 58 aa7.62□□□□□ -1.19
DDX56-204ENST00000431640 SRRM2Q9UQ35 2752 aaKnown RBP7.61□□□□□ -1.19
DDX56-204ENST00000431640 H3BPC8 53 aa7.6□□□□□ -1.19
DDX56-204ENST00000431640 ZCCHC13Q8WW36 166 aaKnown RBP7.59□□□□□ -1.19
DDX56-204ENST00000431640 KRTAP17-1Q9BYP8 105 aa7.59□□□□□ -1.19
DDX56-204ENST00000431640 MMP24-AS1A0A0U1RRL7 71 aa7.59□□□□□ -1.2
DDX56-204ENST00000431640 hDV103S1A0JD37 113 aa7.59□□□□□ -1.2
DDX56-204ENST00000431640 FAM229BQ4G0N7 80 aa7.59□□□□□ -1.2
DDX56-204ENST00000431640 RYR1P21817 5038 aa7.58□□□□□ -1.2
DDX56-204ENST00000431640 HSPG2P98160 4391 aa7.58□□□□□ -1.2
DDX56-204ENST00000431640 KIAA1109Q2LD37 5005 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms