RNA–Protein interactions for RNA: ENST00000431357.1

USP4-205, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 2,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-205ENST00000431357 ATP11AUNQ6ZP68 121 aa7.13□□□□□ -1.27
USP4-205ENST00000431357 PRB2P02812 416 aaPredicted RBP7.13□□□□□ -1.27
USP4-205ENST00000431357 C14orf177Q52M58 125 aa7.13□□□□□ -1.27
USP4-205ENST00000431357 IGFL1Q6UW32 110 aa7.13□□□□□ -1.27
USP4-205ENST00000431357 K7EQZ3 153 aa7.12□□□□□ -1.27
USP4-205ENST00000431357 CYP4F30PQ9H0H9 118 aa7.12□□□□□ -1.27
USP4-205ENST00000431357 A0A1W2PNN7 141 aa7.12□□□□□ -1.27
USP4-205ENST00000431357 PSCAO43653 123 aa7.12□□□□□ -1.27
USP4-205ENST00000431357 HCG22E2RYF7 251 aa7.11□□□□□ -1.27
USP4-205ENST00000431357 F8P00451 2351 aa7.11□□□□□ -1.27
USP4-205ENST00000431357 IGKV2-24A0A0C4DH68 120 aa7.1□□□□□ -1.27
USP4-205ENST00000431357 H0Y9J4 135 aa7.1□□□□□ -1.27
USP4-205ENST00000431357 PRLHP81277 87 aa7.1□□□□□ -1.27
USP4-205ENST00000431357 C1orf64Q8NEQ6 169 aa7.1□□□□□ -1.27
USP4-205ENST00000431357 HUWE1Q7Z6Z7 4374 aaKnown RBP7.09□□□□□ -1.27
USP4-205ENST00000431357 ZCCHC13Q8WW36 166 aaKnown RBP7.09□□□□□ -1.28
USP4-205ENST00000431357 KRTAP1-5Q9BYS1 174 aa7.09□□□□□ -1.28
USP4-205ENST00000431357 SPRR1BP22528 89 aa7.08□□□□□ -1.28
USP4-205ENST00000431357 UBE2DNLQ8IWF7 75 aa7.08□□□□□ -1.28
USP4-205ENST00000431357 PSPHP1O15172 72 aa7.07□□□□□ -1.28
USP4-205ENST00000431357 A0A087WSZ3 146 aa7.07□□□□□ -1.28
USP4-205ENST00000431357 LIMD2Q9BT23 127 aa7.07□□□□□ -1.28
USP4-205ENST00000431357 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.06□□□□□ -1.28
USP4-205ENST00000431357 APLNQ9ULZ1 77 aa7.06□□□□□ -1.28
USP4-205ENST00000431357 STAB1Q9NY15 2570 aa7.04□□□□□ -1.28
USP4-205ENST00000431357 A0A0G2JQZ4 141 aa7.04□□□□□ -1.28
USP4-205ENST00000431357 Q5VV11 94 aa7.04□□□□□ -1.28
USP4-205ENST00000431357 C7orf65Q6ZTY9 151 aa7.04□□□□□ -1.28
USP4-205ENST00000431357 LCA10Q71F78 164 aa7.04□□□□□ -1.28
USP4-205ENST00000431357 MAST4O15021 2626 aa7.04□□□□□ -1.28
USP4-205ENST00000431357 A6NN06 94 aa7.03□□□□□ -1.28
USP4-205ENST00000431357 NDUFB1O75438 58 aa7.03□□□□□ -1.28
USP4-205ENST00000431357 C9orf163Q8N9P6 203 aa7.03□□□□□ -1.28
USP4-205ENST00000431357 FBN1P35555 2871 aaKnown RBP7.03□□□□□ -1.28
USP4-205ENST00000431357 A8MUN3 132 aa7.03□□□□□ -1.28
USP4-205ENST00000431357 C8orf87E5RJ46 101 aa7.03□□□□□ -1.28
USP4-205ENST00000431357 B9D2Q9BPU9 175 aa7.02□□□□□ -1.29
USP4-205ENST00000431357 MP68P56378 58 aa7.01□□□□□ -1.29
USP4-205ENST00000431357 DEFB116Q30KQ4 102 aa7.01□□□□□ -1.29
USP4-205ENST00000431357 CHTF8P0CG12 524 aa7.01□□□□□ -1.29
USP4-205ENST00000431357 WFDC13Q8IUB5 93 aa7.01□□□□□ -1.29
USP4-205ENST00000431357 KRTAP29-1A8MX34 341 aaPredicted RBP7□□□□□ -1.29
USP4-205ENST00000431357 KRTAP11-1Q8IUC1 163 aa7□□□□□ -1.29
USP4-205ENST00000431357 H3BPC8 53 aa6.99□□□□□ -1.29
USP4-205ENST00000431357 LRCOL1A6NCL2 159 aa6.98□□□□□ -1.29
USP4-205ENST00000431357 A8MWP4 228 aa6.98□□□□□ -1.29
USP4-205ENST00000431357 CHKB-CPT1BH3BT56 60 aa6.98□□□□□ -1.29
USP4-205ENST00000431357 LINC00472Q9H8W2 130 aa6.98□□□□□ -1.29
USP4-205ENST00000431357 NOTCH1P46531 2555 aa6.98□□□□□ -1.29
USP4-205ENST00000431357 RPL37AP61513 92 aaKnown RBP6.98□□□□□ -1.29
USP4-205ENST00000431357 CASC2Q6XLA1 102 aa6.98□□□□□ -1.29
USP4-205ENST00000431357 H3BS24 57 aa6.97□□□□□ -1.29
USP4-205ENST00000431357 Q75L30 129 aa6.97□□□□□ -1.29
USP4-205ENST00000431357 NBDYA0A0U1RRE5 68 aa6.97□□□□□ -1.29
USP4-205ENST00000431357 KRTAP13-1Q8IUC0 172 aa6.95□□□□□ -1.3
USP4-205ENST00000431357 SPTSSBQ8NFR3 76 aa6.95□□□□□ -1.3
USP4-205ENST00000431357 CDC42SE1Q9NRR8 79 aa6.95□□□□□ -1.3
USP4-205ENST00000431357 LOC101927531A0A1B0GV80 90 aa6.94□□□□□ -1.3
USP4-205ENST00000431357 DNAH10Q8IVF4 4471 aa6.94□□□□□ -1.3
USP4-205ENST00000431357 Q8N9P0 234 aaPredicted RBP6.94□□□□□ -1.3
USP4-205ENST00000431357 LINC00208Q96KT6 92 aa6.94□□□□□ -1.3
USP4-205ENST00000431357 DYNC2H1Q8NCM8 4307 aaKnown RBP6.93□□□□□ -1.3
USP4-205ENST00000431357 NUPR2A6NF83 97 aa6.93□□□□□ -1.3
USP4-205ENST00000431357 H0Y9P7 68 aa6.93□□□□□ -1.3
USP4-205ENST00000431357 DNAH9Q9NYC9 4486 aa6.93□□□□□ -1.3
USP4-205ENST00000431357 Q6ZRN7 208 aaPredicted RBP6.92□□□□□ -1.3
USP4-205ENST00000431357 SPANXA2-OT1Q8N9U9 137 aa6.92□□□□□ -1.3
USP4-205ENST00000431357 MDFIQ99750 246 aa6.91□□□□□ -1.3
USP4-205ENST00000431357 NBEAL1Q6ZS30 2694 aa6.9□□□□□ -1.3
USP4-205ENST00000431357 SPACA4Q8TDM5 124 aa6.9□□□□□ -1.3
USP4-205ENST00000431357 A8MU10 97 aa6.89□□□□□ -1.31
USP4-205ENST00000431357 PANO1I0J062 215 aa6.89□□□□□ -1.31
USP4-205ENST00000431357 MMP24-AS1A0A0U1RRL7 71 aa6.89□□□□□ -1.31
USP4-205ENST00000431357 PRR15LQ9BU68 103 aa6.89□□□□□ -1.31
USP4-205ENST00000431357 ZNF706Q9Y5V0 76 aaPredicted RBP6.89□□□□□ -1.31
USP4-205ENST00000431357 A6NED7 52 aa6.88□□□□□ -1.31
USP4-205ENST00000431357 LINC00483Q53H64 154 aa6.88□□□□□ -1.31
USP4-205ENST00000431357 PRR4Q16378 134 aa6.88□□□□□ -1.31
USP4-205ENST00000431357 COL6A5A8TX70 2615 aa6.87□□□□□ -1.31
USP4-205ENST00000431357 A0A087X002 238 aa6.86□□□□□ -1.31
USP4-205ENST00000431357 ASB16-AS1Q495Z4 193 aa6.86□□□□□ -1.31
USP4-205ENST00000431357 MOBPQ13875 183 aa6.86□□□□□ -1.31
USP4-205ENST00000431357 TP53AIP1Q9HCN2 124 aa6.86□□□□□ -1.31
USP4-205ENST00000431357 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.86□□□□□ -1.31
USP4-205ENST00000431357 IGLV9-49A0A0B4J1Y8 123 aa6.85□□□□□ -1.31
USP4-205ENST00000431357 Q96NJ1 140 aa6.85□□□□□ -1.31
USP4-205ENST00000431357 A0A087WTM6 91 aa6.84□□□□□ -1.31
USP4-205ENST00000431357 STAB2Q8WWQ8 2551 aa6.83□□□□□ -1.32
USP4-205ENST00000431357 PRR26Q8N8Z3 221 aa6.82□□□□□ -1.32
USP4-205ENST00000431357 C8orf17Q9NRJ1 99 aa6.82□□□□□ -1.32
USP4-205ENST00000431357 MGAM2Q2M2H8 2515 aa6.81□□□□□ -1.32
USP4-205ENST00000431357 LINC01554Q52M75 96 aa6.81□□□□□ -1.32
USP4-205ENST00000431357 LYSTQ99698 3801 aa6.81□□□□□ -1.32
USP4-205ENST00000431357 IGLV5-52A0A0A0MRZ9 124 aa6.8□□□□□ -1.32
USP4-205ENST00000431357 PLECQ15149 4684 aaKnown RBP6.8□□□□□ -1.32
USP4-205ENST00000431357 WWC2-AS2Q96NR7 200 aa6.8□□□□□ -1.32
USP4-205ENST00000431357 IGLV7-46A0A075B6I9 117 aa6.8□□□□□ -1.32
USP4-205ENST00000431357 RTL8CO15255 209 aa6.8□□□□□ -1.32
USP4-205ENST00000431357 CDK2AP2O75956 126 aa6.8□□□□□ -1.32
USP4-205ENST00000431357 PLAC8Q9NZF1 115 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms