RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 SRRM2Q9UQ35 2752 aaKnown RBP8.47□□□□□ -1.05
SNRNP200-202ENST00000429650 SPRR4Q96PI1 79 aa8.47□□□□□ -1.05
SNRNP200-202ENST00000429650 DNAH7Q8WXX0 4024 aa8.46□□□□□ -1.06
SNRNP200-202ENST00000429650 SMIM29Q86T20 159 aa8.44□□□□□ -1.06
SNRNP200-202ENST00000429650 KRTAP1-5Q9BYS1 174 aa8.44□□□□□ -1.06
SNRNP200-202ENST00000429650 DNAH9Q9NYC9 4486 aa8.43□□□□□ -1.06
SNRNP200-202ENST00000429650 A0A096LNI7 61 aa8.43□□□□□ -1.06
SNRNP200-202ENST00000429650 C16orf90A8MZG2 172 aa8.41□□□□□ -1.06
SNRNP200-202ENST00000429650 LINC00476Q8WZB0 136 aa8.41□□□□□ -1.06
SNRNP200-202ENST00000429650 IGKV2-24A0A0C4DH68 120 aa8.41□□□□□ -1.06
SNRNP200-202ENST00000429650 A0A1W2PNN7 141 aa8.4□□□□□ -1.06
SNRNP200-202ENST00000429650 DSCR10P59022 87 aa8.4□□□□□ -1.06
SNRNP200-202ENST00000429650 CNBPP62633 177 aaKnown RBP8.4□□□□□ -1.07
SNRNP200-202ENST00000429650 ATP5EP56381 51 aaPredicted RBP8.39□□□□□ -1.07
SNRNP200-202ENST00000429650 PRLHP81277 87 aa8.39□□□□□ -1.07
SNRNP200-202ENST00000429650 A0A0G2JQZ4 141 aa8.38□□□□□ -1.07
SNRNP200-202ENST00000429650 FAM30AQ9NZY2 134 aa8.38□□□□□ -1.07
SNRNP200-202ENST00000429650 K7EQZ3 153 aa8.37□□□□□ -1.07
SNRNP200-202ENST00000429650 NDUFS5O43920 106 aa8.37□□□□□ -1.07
SNRNP200-202ENST00000429650 IGFL1Q6UW32 110 aa8.37□□□□□ -1.07
SNRNP200-202ENST00000429650 MPLKIPQ8TAP9 179 aa8.37□□□□□ -1.07
SNRNP200-202ENST00000429650 PSCAO43653 123 aa8.37□□□□□ -1.07
SNRNP200-202ENST00000429650 HIGD2AQ9BW72 106 aa8.37□□□□□ -1.07
SNRNP200-202ENST00000429650 A8MUN3 132 aa8.35□□□□□ -1.07
SNRNP200-202ENST00000429650 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.34□□□□□ -1.07
SNRNP200-202ENST00000429650 IGLV8-61A0A075B6I0 122 aa8.34□□□□□ -1.07
SNRNP200-202ENST00000429650 LCE6AA0A183 80 aa8.34□□□□□ -1.07
SNRNP200-202ENST00000429650 UBE2DNLQ8IWF7 75 aa8.33□□□□□ -1.08
SNRNP200-202ENST00000429650 MDFIQ99750 246 aa8.33□□□□□ -1.08
SNRNP200-202ENST00000429650 CHTF8P0CG12 524 aa8.32□□□□□ -1.08
SNRNP200-202ENST00000429650 KRTAP11-1Q8IUC1 163 aa8.32□□□□□ -1.08
SNRNP200-202ENST00000429650 APLNQ9ULZ1 77 aa8.32□□□□□ -1.08
SNRNP200-202ENST00000429650 C14orf177Q52M58 125 aa8.31□□□□□ -1.08
SNRNP200-202ENST00000429650 PHF5AQ7RTV0 110 aaKnown RBP8.31□□□□□ -1.08
SNRNP200-202ENST00000429650 A0A087WSZ3 146 aa8.3□□□□□ -1.08
SNRNP200-202ENST00000429650 HCG22E2RYF7 251 aa8.3□□□□□ -1.08
SNRNP200-202ENST00000429650 DYNC2H1Q8NCM8 4307 aaKnown RBP8.3□□□□□ -1.08
SNRNP200-202ENST00000429650 UBE2AP49459 152 aa8.3□□□□□ -1.08
SNRNP200-202ENST00000429650 DEFB116Q30KQ4 102 aa8.29□□□□□ -1.08
SNRNP200-202ENST00000429650 LCA10Q71F78 164 aa8.28□□□□□ -1.08
SNRNP200-202ENST00000429650 PLECQ15149 4684 aaKnown RBP8.28□□□□□ -1.08
SNRNP200-202ENST00000429650 H0Y9J4 135 aa8.27□□□□□ -1.09
SNRNP200-202ENST00000429650 ZCCHC13Q8WW36 166 aaKnown RBP8.27□□□□□ -1.09
SNRNP200-202ENST00000429650 SPRR1BP22528 89 aa8.26□□□□□ -1.09
SNRNP200-202ENST00000429650 C9orf163Q8N9P6 203 aa8.26□□□□□ -1.09
SNRNP200-202ENST00000429650 LRCOL1A6NCL2 159 aa8.25□□□□□ -1.09
SNRNP200-202ENST00000429650 FAM229BQ4G0N7 80 aa8.25□□□□□ -1.09
SNRNP200-202ENST00000429650 RPL37AP61513 92 aaKnown RBP8.23□□□□□ -1.09
SNRNP200-202ENST00000429650 WFDC13Q8IUB5 93 aa8.23□□□□□ -1.09
SNRNP200-202ENST00000429650 NBDYA0A0U1RRE5 68 aa8.21□□□□□ -1.1
SNRNP200-202ENST00000429650 PANO1I0J062 215 aa8.2□□□□□ -1.1
SNRNP200-202ENST00000429650 LINC00313P59037 77 aa8.2□□□□□ -1.1
SNRNP200-202ENST00000429650 B9D2Q9BPU9 175 aa8.2□□□□□ -1.1
SNRNP200-202ENST00000429650 KRTAP29-1A8MX34 341 aaPredicted RBP8.19□□□□□ -1.1
SNRNP200-202ENST00000429650 STARD9Q9P2P6 4700 aa8.19□□□□□ -1.1
SNRNP200-202ENST00000429650 Q6ZRN7 208 aaPredicted RBP8.19□□□□□ -1.1
SNRNP200-202ENST00000429650 KRTAP13-1Q8IUC0 172 aa8.18□□□□□ -1.1
SNRNP200-202ENST00000429650 LINC00472Q9H8W2 130 aa8.18□□□□□ -1.1
SNRNP200-202ENST00000429650 PRKDCP78527 4128 aaKnown RBP8.17□□□□□ -1.1
SNRNP200-202ENST00000429650 hDV103S1A0JD37 113 aa8.17□□□□□ -1.1
SNRNP200-202ENST00000429650 C7orf65Q6ZTY9 151 aa8.17□□□□□ -1.1
SNRNP200-202ENST00000429650 KMT2AQ03164 3969 aa8.17□□□□□ -1.1
SNRNP200-202ENST00000429650 A8MWP4 228 aa8.16□□□□□ -1.1
SNRNP200-202ENST00000429650 MP68P56378 58 aa8.16□□□□□ -1.1
SNRNP200-202ENST00000429650 CASC2Q6XLA1 102 aa8.15□□□□□ -1.1
SNRNP200-202ENST00000429650 FRAS1Q86XX4 4008 aa8.15□□□□□ -1.11
SNRNP200-202ENST00000429650 TGP01266 2768 aa8.15□□□□□ -1.11
SNRNP200-202ENST00000429650 Q1T7F1 81 aa8.15□□□□□ -1.11
SNRNP200-202ENST00000429650 C1orf64Q8NEQ6 169 aa8.15□□□□□ -1.11
SNRNP200-202ENST00000429650 NUPR2A6NF83 97 aa8.14□□□□□ -1.11
SNRNP200-202ENST00000429650 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.13□□□□□ -1.11
SNRNP200-202ENST00000429650 VPS13DQ5THJ4 4388 aa8.13□□□□□ -1.11
SNRNP200-202ENST00000429650 SPACA4Q8TDM5 124 aa8.13□□□□□ -1.11
SNRNP200-202ENST00000429650 NDUFB1O75438 58 aa8.12□□□□□ -1.11
SNRNP200-202ENST00000429650 CYP4F30PQ9H0H9 118 aa8.12□□□□□ -1.11
SNRNP200-202ENST00000429650 TRAV22A0A0B4J277 110 aa8.12□□□□□ -1.11
SNRNP200-202ENST00000429650 LINC00208Q96KT6 92 aa8.12□□□□□ -1.11
SNRNP200-202ENST00000429650 A6NN06 94 aa8.11□□□□□ -1.11
SNRNP200-202ENST00000429650 PRR4Q16378 134 aa8.11□□□□□ -1.11
SNRNP200-202ENST00000429650 MEGF8Q7Z7M0 2845 aa8.1□□□□□ -1.11
SNRNP200-202ENST00000429650 DNHD1Q96M86 4753 aa8.1□□□□□ -1.11
SNRNP200-202ENST00000429650 LINC01554Q52M75 96 aa8.1□□□□□ -1.11
SNRNP200-202ENST00000429650 H0Y9P7 68 aa8.09□□□□□ -1.11
SNRNP200-202ENST00000429650 ATP11AUNQ6ZP68 121 aa8.08□□□□□ -1.12
SNRNP200-202ENST00000429650 IGLV9-49A0A0B4J1Y8 123 aa8.08□□□□□ -1.12
SNRNP200-202ENST00000429650 MMP24-AS1A0A0U1RRL7 71 aa8.07□□□□□ -1.12
SNRNP200-202ENST00000429650 H3BPC8 53 aa8.07□□□□□ -1.12
SNRNP200-202ENST00000429650 A0A087WTM6 91 aa8.06□□□□□ -1.12
SNRNP200-202ENST00000429650 LINC00483Q53H64 154 aa8.06□□□□□ -1.12
SNRNP200-202ENST00000429650 Q96NJ1 140 aa8.06□□□□□ -1.12
SNRNP200-202ENST00000429650 ZNF706Q9Y5V0 76 aaPredicted RBP8.06□□□□□ -1.12
SNRNP200-202ENST00000429650 A8MU10 97 aa8.06□□□□□ -1.12
SNRNP200-202ENST00000429650 PSPHP1O15172 72 aa8.04□□□□□ -1.12
SNRNP200-202ENST00000429650 SPTSSBQ8NFR3 76 aa8.04□□□□□ -1.12
SNRNP200-202ENST00000429650 DNAH8Q96JB1 4490 aa8.03□□□□□ -1.12
SNRNP200-202ENST00000429650 DNAH2Q9P225 4427 aa8.03□□□□□ -1.12
SNRNP200-202ENST00000429650 DNAH17Q9UFH2 4485 aa8.03□□□□□ -1.12
SNRNP200-202ENST00000429650 SPANXA2-OT1Q8N9U9 137 aa8.02□□□□□ -1.12
SNRNP200-202ENST00000429650 HECTD4Q9Y4D8 3996 aa8.02□□□□□ -1.13
SNRNP200-202ENST00000429650 RTL8CO15255 209 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms