RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 BCE1O60756 84 aa7.95□□□□□ -1.14
CDH3-202ENST00000429102 MP68P56378 58 aa7.95□□□□□ -1.14
CDH3-202ENST00000429102 C1orf64Q8NEQ6 169 aa7.95□□□□□ -1.14
CDH3-202ENST00000429102 PHF5AQ7RTV0 110 aaKnown RBP7.95□□□□□ -1.14
CDH3-202ENST00000429102 DNAH10OSP0CZ25 163 aa7.93□□□□□ -1.14
CDH3-202ENST00000429102 IGFL1Q6UW32 110 aa7.93□□□□□ -1.14
CDH3-202ENST00000429102 PCOTHQ58A44 107 aa7.93□□□□□ -1.14
CDH3-202ENST00000429102 H3BNG1 76 aa7.92□□□□□ -1.14
CDH3-202ENST00000429102 ATP5EP56381 51 aaPredicted RBP7.92□□□□□ -1.14
CDH3-202ENST00000429102 HCG22E2RYF7 251 aa7.92□□□□□ -1.14
CDH3-202ENST00000429102 A8MUN3 132 aa7.9□□□□□ -1.14
CDH3-202ENST00000429102 V9GYY9 64 aa7.9□□□□□ -1.14
CDH3-202ENST00000429102 KRTAP1-5Q9BYS1 174 aa7.9□□□□□ -1.15
CDH3-202ENST00000429102 IGLV9-49A0A0B4J1Y8 123 aa7.89□□□□□ -1.15
CDH3-202ENST00000429102 KRTAP4-16G5E9R7 235 aaPredicted RBP7.89□□□□□ -1.15
CDH3-202ENST00000429102 WIPF1O43516 503 aa7.89□□□□□ -1.15
CDH3-202ENST00000429102 CHKB-CPT1BH3BT56 60 aa7.88□□□□□ -1.15
CDH3-202ENST00000429102 KRTAP11-1Q8IUC1 163 aa7.88□□□□□ -1.15
CDH3-202ENST00000429102 TNP2Q05952 138 aa7.86□□□□□ -1.15
CDH3-202ENST00000429102 H0Y9P7 68 aa7.85□□□□□ -1.15
CDH3-202ENST00000429102 CASC2Q6XLA1 102 aa7.85□□□□□ -1.15
CDH3-202ENST00000429102 PRR15LQ9BU68 103 aa7.85□□□□□ -1.15
CDH3-202ENST00000429102 SPRR1AP35321 89 aa7.84□□□□□ -1.15
CDH3-202ENST00000429102 A8MU10 97 aa7.84□□□□□ -1.15
CDH3-202ENST00000429102 TLX1NBP0CAT3 122 aa7.83□□□□□ -1.16
CDH3-202ENST00000429102 ANAPC11Q9NYG5 84 aa7.83□□□□□ -1.16
CDH3-202ENST00000429102 PMAIP1Q13794 54 aa7.83□□□□□ -1.16
CDH3-202ENST00000429102 TRAV22A0A0B4J277 110 aa7.82□□□□□ -1.16
CDH3-202ENST00000429102 hDV103S1A0JD37 113 aa7.82□□□□□ -1.16
CDH3-202ENST00000429102 SPINK6Q6UWN8 80 aa7.82□□□□□ -1.16
CDH3-202ENST00000429102 K7EIL1 84 aa7.82□□□□□ -1.16
CDH3-202ENST00000429102 SPRR4Q96PI1 79 aa7.82□□□□□ -1.16
CDH3-202ENST00000429102 TGP01266 2768 aa7.82□□□□□ -1.16
CDH3-202ENST00000429102 B9D2Q9BPU9 175 aa7.8□□□□□ -1.16
CDH3-202ENST00000429102 A6NED7 52 aa7.79□□□□□ -1.16
CDH3-202ENST00000429102 PANO1I0J062 215 aa7.78□□□□□ -1.16
CDH3-202ENST00000429102 C16orf90A8MZG2 172 aa7.77□□□□□ -1.17
CDH3-202ENST00000429102 PLA2G2DQ9UNK4 145 aa7.77□□□□□ -1.17
CDH3-202ENST00000429102 IGHV6-1A0A0B4J1U7 121 aa7.76□□□□□ -1.17
CDH3-202ENST00000429102 F8WDY8 70 aa7.76□□□□□ -1.17
CDH3-202ENST00000429102 CDK2AP2O75956 126 aa7.76□□□□□ -1.17
CDH3-202ENST00000429102 SEC61GP60059 68 aa7.76□□□□□ -1.17
CDH3-202ENST00000429102 RETNLBQ9BQ08 111 aa7.76□□□□□ -1.17
CDH3-202ENST00000429102 NDUFB1O75438 58 aa7.76□□□□□ -1.17
CDH3-202ENST00000429102 SPAG11AQ6PDA7 123 aa7.75□□□□□ -1.17
CDH3-202ENST00000429102 IGLV5-37A0A075B6J1 123 aa7.75□□□□□ -1.17
CDH3-202ENST00000429102 HUWE1Q7Z6Z7 4374 aaKnown RBP7.74□□□□□ -1.17
CDH3-202ENST00000429102 DNAH9Q9NYC9 4486 aa7.74□□□□□ -1.17
CDH3-202ENST00000429102 PRR15Q8IV56 129 aa7.73□□□□□ -1.17
CDH3-202ENST00000429102 CNBPP62633 177 aaKnown RBP7.72□□□□□ -1.17
CDH3-202ENST00000429102 ZCCHC13Q8WW36 166 aaKnown RBP7.71□□□□□ -1.18
CDH3-202ENST00000429102 CMYA5Q8N3K9 4069 aa7.69□□□□□ -1.18
CDH3-202ENST00000429102 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.67□□□□□ -1.18
CDH3-202ENST00000429102 A0A1B0GW54 56 aa7.67□□□□□ -1.18
CDH3-202ENST00000429102 A8MWP4 228 aa7.67□□□□□ -1.18
CDH3-202ENST00000429102 DNAH7Q8WXX0 4024 aa7.66□□□□□ -1.18
CDH3-202ENST00000429102 MOBPQ13875 183 aa7.66□□□□□ -1.18
CDH3-202ENST00000429102 FBN3Q75N90 2809 aa7.65□□□□□ -1.18
CDH3-202ENST00000429102 COA5Q86WW8 74 aa7.65□□□□□ -1.19
CDH3-202ENST00000429102 MDFIQ99750 246 aa7.65□□□□□ -1.19
CDH3-202ENST00000429102 LCE6AA0A183 80 aa7.63□□□□□ -1.19
CDH3-202ENST00000429102 LINC00472Q9H8W2 130 aa7.63□□□□□ -1.19
CDH3-202ENST00000429102 KRTAP29-1A8MX34 341 aaPredicted RBP7.63□□□□□ -1.19
CDH3-202ENST00000429102 Q1T7F1 81 aa7.62□□□□□ -1.19
CDH3-202ENST00000429102 C9orf163Q8N9P6 203 aa7.61□□□□□ -1.19
CDH3-202ENST00000429102 A0A087X002 238 aa7.61□□□□□ -1.19
CDH3-202ENST00000429102 NOTCH2NLQ7Z3S9 236 aa7.61□□□□□ -1.19
CDH3-202ENST00000429102 CIRBP-AS1Q8TBR5 109 aa7.6□□□□□ -1.19
CDH3-202ENST00000429102 Q5VV11 94 aa7.6□□□□□ -1.19
CDH3-202ENST00000429102 APLNQ9ULZ1 77 aa7.6□□□□□ -1.19
CDH3-202ENST00000429102 PLECQ15149 4684 aaKnown RBP7.6□□□□□ -1.19
CDH3-202ENST00000429102 MMP24-AS1A0A0U1RRL7 71 aa7.59□□□□□ -1.19
CDH3-202ENST00000429102 C14orf177Q52M58 125 aa7.59□□□□□ -1.19
CDH3-202ENST00000429102 NBDYA0A0U1RRE5 68 aa7.59□□□□□ -1.19
CDH3-202ENST00000429102 Q8N9P0 234 aaPredicted RBP7.58□□□□□ -1.2
CDH3-202ENST00000429102 CYP4F30PQ9H0H9 118 aa7.58□□□□□ -1.2
CDH3-202ENST00000429102 DNAH1Q9P2D7 4330 aa7.58□□□□□ -1.2
CDH3-202ENST00000429102 FRAS1Q86XX4 4008 aa7.57□□□□□ -1.2
CDH3-202ENST00000429102 IGLV8-61A0A075B6I0 122 aa7.56□□□□□ -1.2
CDH3-202ENST00000429102 CD164Q04900 197 aa7.56□□□□□ -1.2
CDH3-202ENST00000429102 PRR26Q8N8Z3 221 aa7.56□□□□□ -1.2
CDH3-202ENST00000429102 LIMD2Q9BT23 127 aa7.55□□□□□ -1.2
CDH3-202ENST00000429102 PSORS1C2Q9UIG4 136 aa7.55□□□□□ -1.2
CDH3-202ENST00000429102 C8orf17Q9NRJ1 99 aa7.54□□□□□ -1.2
CDH3-202ENST00000429102 MEGF8Q7Z7M0 2845 aa7.54□□□□□ -1.2
CDH3-202ENST00000429102 RTL8CO15255 209 aa7.5□□□□□ -1.21
CDH3-202ENST00000429102 KRTAP21-3Q3LHN1 58 aa7.49□□□□□ -1.21
CDH3-202ENST00000429102 LCA10Q71F78 164 aa7.48□□□□□ -1.21
CDH3-202ENST00000429102 SPRR1BP22528 89 aa7.48□□□□□ -1.21
CDH3-202ENST00000429102 SPINK7P58062 85 aa7.47□□□□□ -1.21
CDH3-202ENST00000429102 Q96NJ1 140 aa7.47□□□□□ -1.21
CDH3-202ENST00000429102 A0A087WTM6 91 aa7.47□□□□□ -1.21
CDH3-202ENST00000429102 A0A1B0GVX0 72 aa7.47□□□□□ -1.21
CDH3-202ENST00000429102 SPINK1P00995 79 aa7.47□□□□□ -1.21
CDH3-202ENST00000429102 LOC101927531A0A1B0GV80 90 aa7.46□□□□□ -1.21
CDH3-202ENST00000429102 MRPL34Q9BQ48 92 aaKnown RBP7.46□□□□□ -1.22
CDH3-202ENST00000429102 DNAH3Q8TD57 4116 aa7.46□□□□□ -1.22
CDH3-202ENST00000429102 LY6G6CO95867 125 aa7.45□□□□□ -1.22
CDH3-202ENST00000429102 SPACA4Q8TDM5 124 aa7.45□□□□□ -1.22
CDH3-202ENST00000429102 KMT2AQ03164 3969 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms