RNA–Protein interactions for RNA: ENST00000428554.6

CCDC30-203, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 3,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-203ENST00000428554 TRAV21A0A0B4J279 112 aa1.88□□□□□ -2.11
CCDC30-203ENST00000428554 M0R3E3 92 aa1.88□□□□□ -2.11
CCDC30-203ENST00000428554 ANAPC11Q9NYG5 84 aa1.88□□□□□ -2.11
CCDC30-203ENST00000428554 TRRAPQ9Y4A5 3859 aa1.88□□□□□ -2.11
CCDC30-203ENST00000428554 PKDREJQ9NTG1 2253 aa1.88□□□□□ -2.11
CCDC30-203ENST00000428554 STAB2Q8WWQ8 2551 aa1.87□□□□□ -2.11
CCDC30-203ENST00000428554 J3QRE1 110 aa1.87□□□□□ -2.11
CCDC30-203ENST00000428554 SMR3AQ99954 134 aa1.87□□□□□ -2.11
CCDC30-203ENST00000428554 DYNC2H1Q8NCM8 4307 aaKnown RBP1.87□□□□□ -2.11
CCDC30-203ENST00000428554 PI4KAP42356 2102 aa1.87□□□□□ -2.11
CCDC30-203ENST00000428554 MYO7AQ13402 2215 aa1.87□□□□□ -2.11
CCDC30-203ENST00000428554 DNAL4O96015 105 aa1.87□□□□□ -2.11
CCDC30-203ENST00000428554 KRTAP1-4P0C5Y4 121 aa1.87□□□□□ -2.11
CCDC30-203ENST00000428554 ABRACLQ9P1F3 81 aa1.87□□□□□ -2.11
CCDC30-203ENST00000428554 SSPOA2VEC9 5147 aa1.87□□□□□ -2.11
CCDC30-203ENST00000428554 TRBV6-1A0A0K0K1D8 114 aa1.86□□□□□ -2.11
CCDC30-203ENST00000428554 KRTAP5-1Q6L8H4 278 aa1.86□□□□□ -2.11
CCDC30-203ENST00000428554 ZNF625Q96I27 306 aaPredicted RBP1.86□□□□□ -2.11
CCDC30-203ENST00000428554 WFDC10AQ9H1F0 79 aa1.86□□□□□ -2.11
CCDC30-203ENST00000428554 NEBP20929 6669 aa1.86□□□□□ -2.11
CCDC30-203ENST00000428554 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.86□□□□□ -2.11
CCDC30-203ENST00000428554 CTXND1A0A1B0GTU2 59 aa1.86□□□□□ -2.11
CCDC30-203ENST00000428554 IGKV2-29A2NJV5 120 aaPredicted RBP1.86□□□□□ -2.11
CCDC30-203ENST00000428554 LRCOL1A6NCL2 159 aa1.86□□□□□ -2.11
CCDC30-203ENST00000428554 IGLV6-57P01721 117 aa1.86□□□□□ -2.11
CCDC30-203ENST00000428554 TMEM14CQ9P0S9 112 aa1.86□□□□□ -2.11
CCDC30-203ENST00000428554 SACSQ9NZJ4 4579 aa1.85□□□□□ -2.11
CCDC30-203ENST00000428554 LINC01546A6NGU7 62 aa1.85□□□□□ -2.11
CCDC30-203ENST00000428554 PRH1P02810 166 aa1.85□□□□□ -2.11
CCDC30-203ENST00000428554 SPINK14Q6IE38 97 aa1.85□□□□□ -2.11
CCDC30-203ENST00000428554 LINC00304Q8N9R0 145 aa1.85□□□□□ -2.11
CCDC30-203ENST00000428554 PLXNB2O15031 1838 aa1.85□□□□□ -2.11
CCDC30-203ENST00000428554 ASCC3Q8N3C0 2202 aaKnown RBP1.85□□□□□ -2.11
CCDC30-203ENST00000428554 KRTAP10-12P60413 245 aa1.85□□□□□ -2.11
CCDC30-203ENST00000428554 IGKV2D-24A0A075B6R9 120 aa1.85□□□□□ -2.11
CCDC30-203ENST00000428554 SMIM27A0A1W2PRY6 76 aa1.85□□□□□ -2.11
CCDC30-203ENST00000428554 KRTAP5-4Q6L8H1 288 aa1.85□□□□□ -2.11
CCDC30-203ENST00000428554 SPTBP11277 2137 aa1.84□□□□□ -2.11
CCDC30-203ENST00000428554 LINC00959A0A1B0GUT2 108 aa1.84□□□□□ -2.11
CCDC30-203ENST00000428554 C10orf113Q5VZT2 155 aa1.84□□□□□ -2.11
CCDC30-203ENST00000428554 BAZ2BQ9UIF8 2168 aaKnown RBP1.84□□□□□ -2.12
CCDC30-203ENST00000428554 TRGV4A0A0C4DH28 118 aa1.84□□□□□ -2.12
CCDC30-203ENST00000428554 H3BRN7 92 aa1.84□□□□□ -2.12
CCDC30-203ENST00000428554 IGKV4-1P06312 121 aa1.83□□□□□ -2.12
CCDC30-203ENST00000428554 C10orf99Q6UWK7 81 aa1.83□□□□□ -2.12
CCDC30-203ENST00000428554 LCE3CQ5T5A8 94 aa1.83□□□□□ -2.12
CCDC30-203ENST00000428554 NCOA6Q14686 2063 aaPredicted RBP1.83□□□□□ -2.12
CCDC30-203ENST00000428554 ESPL1Q14674 2120 aa1.83□□□□□ -2.12
CCDC30-203ENST00000428554 PRRC2AP48634 2157 aaKnown RBP1.83□□□□□ -2.12
CCDC30-203ENST00000428554 TRGV1A0A0A0MS02 117 aa1.82□□□□□ -2.12
CCDC30-203ENST00000428554 KRTAP10-8P60410 259 aa1.82□□□□□ -2.12
CCDC30-203ENST00000428554 DEFB114Q30KQ6 69 aa1.82□□□□□ -2.12
CCDC30-203ENST00000428554 FXYD4P59646 89 aa1.82□□□□□ -2.12
CCDC30-203ENST00000428554 KRTAP20-1Q3LI63 56 aa1.82□□□□□ -2.12
CCDC30-203ENST00000428554 ENHOQ6UWT2 76 aa1.82□□□□□ -2.12
CCDC30-203ENST00000428554 IGIPA6NJ69 53 aa1.82□□□□□ -2.12
CCDC30-203ENST00000428554 COX6B1P14854 86 aa1.81□□□□□ -2.12
CCDC30-203ENST00000428554 PLNP26678 52 aa1.81□□□□□ -2.12
CCDC30-203ENST00000428554 DEFB103AP81534 67 aa1.81□□□□□ -2.12
CCDC30-203ENST00000428554 PRR9Q5T870 116 aa1.81□□□□□ -2.12
CCDC30-203ENST00000428554 KRTAP4-4Q9BYR3 166 aa1.81□□□□□ -2.12
CCDC30-203ENST00000428554 UBL5Q9BZL1 73 aa1.81□□□□□ -2.12
CCDC30-203ENST00000428554 TRAV1-2A0A0B4J238 106 aa1.8□□□□□ -2.12
CCDC30-203ENST00000428554 ARFGEF3Q5TH69 2177 aa1.8□□□□□ -2.12
CCDC30-203ENST00000428554 GOLGA4Q13439 2230 aaKnown RBP1.8□□□□□ -2.12
CCDC30-203ENST00000428554 FLG2Q5D862 2391 aaPredicted RBP1.8□□□□□ -2.12
CCDC30-203ENST00000428554 SERF2P84101 59 aa1.8□□□□□ -2.12
CCDC30-203ENST00000428554 ABCA4P78363 2273 aa1.8□□□□□ -2.12
CCDC30-203ENST00000428554 Q6ZRN7 208 aaPredicted RBP1.8□□□□□ -2.12
CCDC30-203ENST00000428554 K7EMI3 77 aa1.79□□□□□ -2.12
CCDC30-203ENST00000428554 MDC1Q14676 2089 aaKnown RBP1.79□□□□□ -2.12
CCDC30-203ENST00000428554 AKAP6Q13023 2319 aa1.79□□□□□ -2.12
CCDC30-203ENST00000428554 IGKV2-28A0A075B6P5 120 aa1.79□□□□□ -2.12
CCDC30-203ENST00000428554 TRGV2A0A075B6R0 118 aa1.79□□□□□ -2.12
CCDC30-203ENST00000428554 IGKV2D-28P01615 120 aa1.79□□□□□ -2.12
CCDC30-203ENST00000428554 WFDC9Q8NEX5 89 aa1.79□□□□□ -2.12
CCDC30-203ENST00000428554 HMCN2Q8NDA2 5059 aa1.78□□□□□ -2.12
CCDC30-203ENST00000428554 A0A096LNT2 108 aa1.78□□□□□ -2.12
CCDC30-203ENST00000428554 CAV3P56539 151 aa1.78□□□□□ -2.12
CCDC30-203ENST00000428554 SNRPGP62308 76 aaKnown RBP1.78□□□□□ -2.12
CCDC30-203ENST00000428554 GAFA1Q96PS6 74 aa1.78□□□□□ -2.12
CCDC30-203ENST00000428554 FCER1GP30273 86 aa1.78□□□□□ -2.12
CCDC30-203ENST00000428554 COA5Q86WW8 74 aa1.78□□□□□ -2.12
CCDC30-203ENST00000428554 CMYA5Q8N3K9 4069 aa1.78□□□□□ -2.12
CCDC30-203ENST00000428554 DIDO1Q9BTC0 2240 aaKnown RBP1.77□□□□□ -2.13
CCDC30-203ENST00000428554 KCNQ1DNQ9H478 68 aa1.77□□□□□ -2.13
CCDC30-203ENST00000428554 HECTD4Q9Y4D8 3996 aa1.77□□□□□ -2.13
CCDC30-203ENST00000428554 ACYP2P14621 99 aa1.77□□□□□ -2.13
CCDC30-203ENST00000428554 DEFB112Q30KQ8 113 aa1.77□□□□□ -2.13
CCDC30-203ENST00000428554 KNL1Q8NG31 2342 aa1.76□□□□□ -2.13
CCDC30-203ENST00000428554 NDUFA4O00483 81 aa1.76□□□□□ -2.13
CCDC30-203ENST00000428554 KRTAP12-2P59991 146 aa1.76□□□□□ -2.13
CCDC30-203ENST00000428554 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.76□□□□□ -2.13
CCDC30-203ENST00000428554 INTS1Q8N201 2190 aaKnown RBP1.75□□□□□ -2.13
CCDC30-203ENST00000428554 A0A1B0GVY2 172 aa1.75□□□□□ -2.13
CCDC30-203ENST00000428554 G3V318 75 aa1.75□□□□□ -2.13
CCDC30-203ENST00000428554 COX7BP24311 80 aa1.75□□□□□ -2.13
CCDC30-203ENST00000428554 SYNE2Q8WXH0 6885 aaKnown RBP1.75□□□□□ -2.13
CCDC30-203ENST00000428554 A0A1B0GU69 56 aa1.75□□□□□ -2.13
CCDC30-203ENST00000428554 I3L3M4 83 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms