RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 SCXQ7RTU7 201 aa13.39□□□□□ -0.27
CNEP1R1-202ENST00000427478 KRTAP10-2P60368 255 aa13.38□□□□□ -0.27
CNEP1R1-202ENST00000427478 CXCL6P80162 114 aa13.37□□□□□ -0.27
CNEP1R1-202ENST00000427478 FRAS1Q86XX4 4008 aa13.37□□□□□ -0.27
CNEP1R1-202ENST00000427478 A0A0G2JQZ4 141 aa13.37□□□□□ -0.27
CNEP1R1-202ENST00000427478 SPRR1BP22528 89 aa13.36□□□□□ -0.27
CNEP1R1-202ENST00000427478 NREPQ16612 68 aa13.36□□□□□ -0.27
CNEP1R1-202ENST00000427478 PSORS1C2Q9UIG4 136 aa13.36□□□□□ -0.27
CNEP1R1-202ENST00000427478 IGFL1Q6UW32 110 aa13.36□□□□□ -0.27
CNEP1R1-202ENST00000427478 HYDINQ4G0P3 5121 aa13.34□□□□□ -0.27
CNEP1R1-202ENST00000427478 SPRR4Q96PI1 79 aa13.34□□□□□ -0.27
CNEP1R1-202ENST00000427478 IGLV8-61A0A075B6I0 122 aa13.33□□□□□ -0.28
CNEP1R1-202ENST00000427478 A0A1B0GW54 56 aa13.33□□□□□ -0.28
CNEP1R1-202ENST00000427478 SRRM2Q9UQ35 2752 aaKnown RBP13.32□□□□□ -0.28
CNEP1R1-202ENST00000427478 CCDC179H3BU77 68 aa13.31□□□□□ -0.28
CNEP1R1-202ENST00000427478 ATOX1O00244 68 aa13.31□□□□□ -0.28
CNEP1R1-202ENST00000427478 DNAH8Q96JB1 4490 aa13.31□□□□□ -0.28
CNEP1R1-202ENST00000427478 CRYGAP11844 174 aa13.28□□□□□ -0.28
CNEP1R1-202ENST00000427478 FAM30AQ9NZY2 134 aa13.28□□□□□ -0.28
CNEP1R1-202ENST00000427478 DNAH11Q96DT5 4516 aa13.26□□□□□ -0.29
CNEP1R1-202ENST00000427478 DNAH5Q8TE73 4624 aa13.26□□□□□ -0.29
CNEP1R1-202ENST00000427478 BPY2O14599 106 aa13.25□□□□□ -0.29
CNEP1R1-202ENST00000427478 Q8N9L7 120 aa13.24□□□□□ -0.29
CNEP1R1-202ENST00000427478 CIRBP-AS1Q8TBR5 109 aa13.24□□□□□ -0.29
CNEP1R1-202ENST00000427478 ZNF861PO60384 105 aa13.22□□□□□ -0.29
CNEP1R1-202ENST00000427478 KRTAP10-1P60331 282 aa13.21□□□□□ -0.3
CNEP1R1-202ENST00000427478 FAT2Q9NYQ8 4349 aa13.2□□□□□ -0.3
CNEP1R1-202ENST00000427478 PKD1P98161 4303 aa13.19□□□□□ -0.3
CNEP1R1-202ENST00000427478 A0A087WSZ3 146 aa13.19□□□□□ -0.3
CNEP1R1-202ENST00000427478 ZNF706Q9Y5V0 76 aaPredicted RBP13.19□□□□□ -0.3
CNEP1R1-202ENST00000427478 IGKV4-1P06312 121 aa13.18□□□□□ -0.3
CNEP1R1-202ENST00000427478 LINC00483Q53H64 154 aa13.18□□□□□ -0.3
CNEP1R1-202ENST00000427478 IGLV9-49A0A0B4J1Y8 123 aa13.18□□□□□ -0.3
CNEP1R1-202ENST00000427478 COX7CP15954 63 aa13.18□□□□□ -0.3
CNEP1R1-202ENST00000427478 UQCRQO14949 82 aa13.16□□□□□ -0.3
CNEP1R1-202ENST00000427478 IGLV7-43P04211 117 aa13.16□□□□□ -0.3
CNEP1R1-202ENST00000427478 C9orf153Q5TBE3 101 aa13.16□□□□□ -0.3
CNEP1R1-202ENST00000427478 Q6ZSA8 131 aa13.16□□□□□ -0.3
CNEP1R1-202ENST00000427478 SERP2Q8N6R1 65 aa13.15□□□□□ -0.3
CNEP1R1-202ENST00000427478 ANAPC11Q9NYG5 84 aa13.12□□□□□ -0.31
CNEP1R1-202ENST00000427478 DSCR10P59022 87 aa13.1□□□□□ -0.31
CNEP1R1-202ENST00000427478 SACSQ9NZJ4 4579 aa13.09□□□□□ -0.31
CNEP1R1-202ENST00000427478 LCE6AA0A183 80 aa13.09□□□□□ -0.31
CNEP1R1-202ENST00000427478 DEFB116Q30KQ4 102 aa13.09□□□□□ -0.31
CNEP1R1-202ENST00000427478 MOBPQ13875 183 aa13.06□□□□□ -0.32
CNEP1R1-202ENST00000427478 K7EQZ3 153 aa13.05□□□□□ -0.32
CNEP1R1-202ENST00000427478 RPL37AP61513 92 aaKnown RBP13.02□□□□□ -0.33
CNEP1R1-202ENST00000427478 TRAV7A0A075B6U4 112 aa13.01□□□□□ -0.33
CNEP1R1-202ENST00000427478 HRCT1Q6UXD1 115 aa13.01□□□□□ -0.33
CNEP1R1-202ENST00000427478 SMIM20Q8N5G0 67 aa13□□□□□ -0.33
CNEP1R1-202ENST00000427478 LINC00336Q6ZUF6 198 aa12.97□□□□□ -0.33
CNEP1R1-202ENST00000427478 LINC00472Q9H8W2 130 aa12.97□□□□□ -0.33
CNEP1R1-202ENST00000427478 CYSTM1Q9H1C7 97 aa12.95□□□□□ -0.34
CNEP1R1-202ENST00000427478 SS18L2Q9UHA2 77 aa12.95□□□□□ -0.34
CNEP1R1-202ENST00000427478 LRP1BQ9NZR2 4599 aa12.94□□□□□ -0.34
CNEP1R1-202ENST00000427478 C20orf197Q8N268 126 aa12.91□□□□□ -0.34
CNEP1R1-202ENST00000427478 HCG22E2RYF7 251 aa12.89□□□□□ -0.35
CNEP1R1-202ENST00000427478 OCR1Q9BZK8 76 aa12.89□□□□□ -0.35
CNEP1R1-202ENST00000427478 A8MWP4 228 aa12.87□□□□□ -0.35
CNEP1R1-202ENST00000427478 PKHD1P08F94 4074 aa12.87□□□□□ -0.35
CNEP1R1-202ENST00000427478 A0A1B0GVY2 172 aa12.86□□□□□ -0.35
CNEP1R1-202ENST00000427478 Q96NJ1 140 aa12.86□□□□□ -0.35
CNEP1R1-202ENST00000427478 PRR15Q8IV56 129 aa12.85□□□□□ -0.35
CNEP1R1-202ENST00000427478 WFDC13Q8IUB5 93 aa12.84□□□□□ -0.35
CNEP1R1-202ENST00000427478 J3KT08 172 aa12.83□□□□□ -0.35
CNEP1R1-202ENST00000427478 A0A087X002 238 aa12.83□□□□□ -0.36
CNEP1R1-202ENST00000427478 SNURFQ9Y675 71 aa12.8□□□□□ -0.36
CNEP1R1-202ENST00000427478 SSBP3-AS1Q7Z2R9 100 aa12.8□□□□□ -0.36
CNEP1R1-202ENST00000427478 KRTAP13-2Q52LG2 175 aa12.78□□□□□ -0.36
CNEP1R1-202ENST00000427478 RYR2Q92736 4967 aa12.78□□□□□ -0.36
CNEP1R1-202ENST00000427478 VPS13BQ7Z7G8 4022 aa12.78□□□□□ -0.36
CNEP1R1-202ENST00000427478 KLKP1Q107X0 134 aa12.77□□□□□ -0.37
CNEP1R1-202ENST00000427478 NDUFB1O75438 58 aa12.76□□□□□ -0.37
CNEP1R1-202ENST00000427478 KRTAP1-4P0C5Y4 121 aa12.76□□□□□ -0.37
CNEP1R1-202ENST00000427478 FAM229BQ4G0N7 80 aa12.76□□□□□ -0.37
CNEP1R1-202ENST00000427478 KRTAP29-1A8MX34 341 aaPredicted RBP12.75□□□□□ -0.37
CNEP1R1-202ENST00000427478 CASC2Q6XLA1 102 aa12.75□□□□□ -0.37
CNEP1R1-202ENST00000427478 TMEM254Q8TBM7 123 aa12.75□□□□□ -0.37
CNEP1R1-202ENST00000427478 CD164Q04900 197 aa12.74□□□□□ -0.37
CNEP1R1-202ENST00000427478 DYNC1H1Q14204 4646 aaKnown RBP12.74□□□□□ -0.37
CNEP1R1-202ENST00000427478 SMR3BP02814 79 aaPredicted RBP12.72□□□□□ -0.37
CNEP1R1-202ENST00000427478 TMEM258P61165 79 aa12.72□□□□□ -0.37
CNEP1R1-202ENST00000427478 KMT2CQ8NEZ4 4911 aaKnown RBP12.72□□□□□ -0.37
CNEP1R1-202ENST00000427478 MMP24-AS1A0A0U1RRL7 71 aa12.71□□□□□ -0.38
CNEP1R1-202ENST00000427478 H7BZZ5 65 aa12.68□□□□□ -0.38
CNEP1R1-202ENST00000427478 CDK2AP2O75956 126 aa12.68□□□□□ -0.38
CNEP1R1-202ENST00000427478 SPINK6Q6UWN8 80 aa12.68□□□□□ -0.38
CNEP1R1-202ENST00000427478 A0A0U1RQV1 116 aa12.67□□□□□ -0.38
CNEP1R1-202ENST00000427478 IGHV6-1A0A0B4J1U7 121 aa12.66□□□□□ -0.38
CNEP1R1-202ENST00000427478 A0A1B0GVX0 72 aa12.66□□□□□ -0.38
CNEP1R1-202ENST00000427478 PLA2G1BP04054 148 aaKnown RBP12.66□□□□□ -0.38
CNEP1R1-202ENST00000427478 hDV103S1A0JD37 113 aa12.64□□□□□ -0.39
CNEP1R1-202ENST00000427478 C8orf17Q9NRJ1 99 aa12.64□□□□□ -0.39
CNEP1R1-202ENST00000427478 NDUFC1O43677 76 aa12.6□□□□□ -0.39
CNEP1R1-202ENST00000427478 ASB16-AS1Q495Z4 193 aa12.6□□□□□ -0.39
CNEP1R1-202ENST00000427478 APOBP04114 4563 aaKnown RBP12.6□□□□□ -0.39
CNEP1R1-202ENST00000427478 C5orf47Q569G3 176 aa12.59□□□□□ -0.39
CNEP1R1-202ENST00000427478 TYMSOSQ8TAI1 123 aa12.58□□□□□ -0.4
CNEP1R1-202ENST00000427478 FAM236DA0A1B0GTK5 79 aa12.56□□□□□ -0.4
CNEP1R1-202ENST00000427478 FAM236CP0DP71 79 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms