RNA–Protein interactions for RNA: ENST00000427447.5

LINC00649-203, long intergenic non-protein coding RNA 649, humanhuman

TSL 1 (best) BASIC

Gene LINC00649, Length 9,124 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-203ENST00000427447 CASC10Q5T4H9 136 aa4.94□□□□□ -1.62
LINC00649-203ENST00000427447 CFAP54Q96N23 3096 aa4.94□□□□□ -1.62
LINC00649-203ENST00000427447 C5orf42Q9H799 3197 aa4.94□□□□□ -1.62
LINC00649-203ENST00000427447 STAB2Q8WWQ8 2551 aa4.92□□□□□ -1.62
LINC00649-203ENST00000427447 SMR3AQ99954 134 aa4.92□□□□□ -1.62
LINC00649-203ENST00000427447 LAMA2P24043 3122 aaKnown RBP4.91□□□□□ -1.62
LINC00649-203ENST00000427447 ZNF861PO60384 105 aa4.9□□□□□ -1.62
LINC00649-203ENST00000427447 CNBPP62633 177 aaKnown RBP4.9□□□□□ -1.63
LINC00649-203ENST00000427447 UTRNP46939 3433 aa4.9□□□□□ -1.63
LINC00649-203ENST00000427447 ZCCHC13Q8WW36 166 aaKnown RBP4.89□□□□□ -1.63
LINC00649-203ENST00000427447 GCN1Q92616 2671 aaKnown RBP4.89□□□□□ -1.63
LINC00649-203ENST00000427447 R4GN34 69 aa4.89□□□□□ -1.63
LINC00649-203ENST00000427447 LINC00304Q8N9R0 145 aa4.87□□□□□ -1.63
LINC00649-203ENST00000427447 ADM2Q7Z4H4 148 aa4.87□□□□□ -1.63
LINC00649-203ENST00000427447 SETXQ7Z333 2677 aaKnown RBP4.87□□□□□ -1.63
LINC00649-203ENST00000427447 TEP1Q99973 2627 aaKnown RBP4.86□□□□□ -1.63
LINC00649-203ENST00000427447 A8MUU9 505 aa4.86□□□□□ -1.63
LINC00649-203ENST00000427447 A0A0C4DFX4 3053 aa4.86□□□□□ -1.63
LINC00649-203ENST00000427447 A0A1W2PPR1 153 aa4.86□□□□□ -1.63
LINC00649-203ENST00000427447 S4R3F8 94 aa4.84□□□□□ -1.64
LINC00649-203ENST00000427447 MMP24-AS1A0A0U1RRL7 71 aa4.83□□□□□ -1.64
LINC00649-203ENST00000427447 KLK9Q2XQG4 91 aa4.83□□□□□ -1.64
LINC00649-203ENST00000427447 PANO1I0J062 215 aa4.82□□□□□ -1.64
LINC00649-203ENST00000427447 Q8NDZ9 215 aa4.82□□□□□ -1.64
LINC00649-203ENST00000427447 ITPR2Q14571 2701 aa4.82□□□□□ -1.64
LINC00649-203ENST00000427447 KRTAP10-9P60411 292 aa4.81□□□□□ -1.64
LINC00649-203ENST00000427447 A0A0G2JQZ4 141 aa4.81□□□□□ -1.64
LINC00649-203ENST00000427447 ANAPC11Q9NYG5 84 aa4.8□□□□□ -1.64
LINC00649-203ENST00000427447 KRTAP11-1Q8IUC1 163 aa4.8□□□□□ -1.64
LINC00649-203ENST00000427447 ZNF292O60281 2723 aa4.8□□□□□ -1.64
LINC00649-203ENST00000427447 Q5W150 140 aa4.8□□□□□ -1.64
LINC00649-203ENST00000427447 KRTAP23-1A1A580 65 aa4.79□□□□□ -1.64
LINC00649-203ENST00000427447 NBDYA0A0U1RRE5 68 aa4.78□□□□□ -1.64
LINC00649-203ENST00000427447 APCP25054 2843 aa4.77□□□□□ -1.65
LINC00649-203ENST00000427447 M0QZ58 72 aa4.76□□□□□ -1.65
LINC00649-203ENST00000427447 C9orf92A6NGG3 77 aa4.76□□□□□ -1.65
LINC00649-203ENST00000427447 UTP20O75691 2785 aaKnown RBP4.75□□□□□ -1.65
LINC00649-203ENST00000427447 NSD1Q96L73 2696 aaPredicted RBP4.75□□□□□ -1.65
LINC00649-203ENST00000427447 TRIOO75962 3097 aa4.75□□□□□ -1.65
LINC00649-203ENST00000427447 FAM168BA1KXE4 195 aa4.74□□□□□ -1.65
LINC00649-203ENST00000427447 C10orf142B7Z368 130 aa4.74□□□□□ -1.65
LINC00649-203ENST00000427447 LINC00472Q9H8W2 130 aa4.74□□□□□ -1.65
LINC00649-203ENST00000427447 LCE6AA0A183 80 aa4.73□□□□□ -1.65
LINC00649-203ENST00000427447 TRANK1O15050 2925 aa4.71□□□□□ -1.66
LINC00649-203ENST00000427447 VPS13AQ96RL7 3174 aa4.71□□□□□ -1.66
LINC00649-203ENST00000427447 XIRP2A4UGR9 3374 aa4.71□□□□□ -1.66
LINC00649-203ENST00000427447 C10orf95Q9H7T3 257 aa4.7□□□□□ -1.66
LINC00649-203ENST00000427447 WWC2-AS2Q96NR7 200 aa4.7□□□□□ -1.66
LINC00649-203ENST00000427447 KRTAP4-16G5E9R7 235 aaPredicted RBP4.69□□□□□ -1.66
LINC00649-203ENST00000427447 P0C880 135 aa4.68□□□□□ -1.66
LINC00649-203ENST00000427447 Q6ZSA8 131 aa4.68□□□□□ -1.66
LINC00649-203ENST00000427447 MGAQ8IWI9 3026 aa4.67□□□□□ -1.66
LINC00649-203ENST00000427447 A0A096LNT2 108 aa4.67□□□□□ -1.66
LINC00649-203ENST00000427447 DSPP15924 2871 aaKnown RBP4.66□□□□□ -1.66
LINC00649-203ENST00000427447 FRYLO94915 3013 aa4.66□□□□□ -1.66
LINC00649-203ENST00000427447 IGSF10Q6WRI0 2623 aa4.66□□□□□ -1.66
LINC00649-203ENST00000427447 NBEAL2Q6ZNJ1 2754 aa4.64□□□□□ -1.67
LINC00649-203ENST00000427447 SPRR1BP22528 89 aa4.64□□□□□ -1.67
LINC00649-203ENST00000427447 KRTAP26-1Q6PEX3 210 aa4.63□□□□□ -1.67
LINC00649-203ENST00000427447 TNP1P09430 55 aa4.62□□□□□ -1.67
LINC00649-203ENST00000427447 FRYQ5TBA9 3013 aa4.62□□□□□ -1.67
LINC00649-203ENST00000427447 KRTAP29-1A8MX34 341 aaPredicted RBP4.62□□□□□ -1.67
LINC00649-203ENST00000427447 FREM2Q5SZK8 3169 aa4.62□□□□□ -1.67
LINC00649-203ENST00000427447 KRTAP24-1Q3LI83 254 aa4.61□□□□□ -1.67
LINC00649-203ENST00000427447 REV3LO60673 3130 aa4.61□□□□□ -1.67
LINC00649-203ENST00000427447 INE1O15225 51 aa4.61□□□□□ -1.67
LINC00649-203ENST00000427447 ITPR1Q14643 2758 aa4.61□□□□□ -1.67
LINC00649-203ENST00000427447 LINC00612Q8N6U2 182 aa4.61□□□□□ -1.67
LINC00649-203ENST00000427447 SPRR1AP35321 89 aa4.6□□□□□ -1.67
LINC00649-203ENST00000427447 PRUNE2Q8WUY3 3088 aa4.57□□□□□ -1.68
LINC00649-203ENST00000427447 GIG44P09565 113 aaPredicted RBP4.57□□□□□ -1.68
LINC00649-203ENST00000427447 UBR5O95071 2799 aaPredicted RBP4.57□□□□□ -1.68
LINC00649-203ENST00000427447 A0A087WTM6 91 aa4.57□□□□□ -1.68
LINC00649-203ENST00000427447 MKI67P46013 3256 aaKnown RBP4.57□□□□□ -1.68
LINC00649-203ENST00000427447 CELSR3Q9NYQ7 3312 aa4.56□□□□□ -1.68
LINC00649-203ENST00000427447 WDFY4Q6ZS81 3184 aa4.56□□□□□ -1.68
LINC00649-203ENST00000427447 A8MU10 97 aa4.55□□□□□ -1.68
LINC00649-203ENST00000427447 KALRNO60229 2985 aa4.55□□□□□ -1.68
LINC00649-203ENST00000427447 CHD9Q3L8U1 2897 aa4.55□□□□□ -1.68
LINC00649-203ENST00000427447 RANBP2P49792 3224 aaKnown RBP4.54□□□□□ -1.68
LINC00649-203ENST00000427447 LRBAP50851 2863 aa4.54□□□□□ -1.68
LINC00649-203ENST00000427447 K7EIL1 84 aa4.54□□□□□ -1.68
LINC00649-203ENST00000427447 SMR3BP02814 79 aaPredicted RBP4.53□□□□□ -1.68
LINC00649-203ENST00000427447 ASH1LQ9NR48 2969 aaKnown RBP4.53□□□□□ -1.68
LINC00649-203ENST00000427447 CHD7Q9P2D1 2997 aa4.53□□□□□ -1.68
LINC00649-203ENST00000427447 M0R2T5 61 aa4.52□□□□□ -1.69
LINC00649-203ENST00000427447 KRTAP10-11P60412 298 aa4.52□□□□□ -1.69
LINC00649-203ENST00000427447 UNC80Q8N2C7 3258 aa4.51□□□□□ -1.69
LINC00649-203ENST00000427447 FLNCQ14315 2725 aa4.51□□□□□ -1.69
LINC00649-203ENST00000427447 ZFHX3Q15911 3703 aa4.51□□□□□ -1.69
LINC00649-203ENST00000427447 COL12A1Q99715 3063 aa4.5□□□□□ -1.69
LINC00649-203ENST00000427447 CRYBG3Q68DQ2 2970 aa4.49□□□□□ -1.69
LINC00649-203ENST00000427447 DMXL2Q8TDJ6 3036 aa4.49□□□□□ -1.69
LINC00649-203ENST00000427447 HTTP42858 3142 aa4.49□□□□□ -1.69
LINC00649-203ENST00000427447 LAMA1P25391 3075 aa4.47□□□□□ -1.69
LINC00649-203ENST00000427447 LAMA3Q16787 3333 aa4.46□□□□□ -1.7
LINC00649-203ENST00000427447 NF1P21359 2839 aa4.46□□□□□ -1.7
LINC00649-203ENST00000427447 PRO2289Q9P1D8 64 aa4.46□□□□□ -1.7
LINC00649-203ENST00000427447 TACC2O95359 2948 aa4.45□□□□□ -1.7
LINC00649-203ENST00000427447 BRCA2P51587 3418 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms