RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 IGLV1-50A0A075B6I6 118 aa8.56□□□□□ -1.04
USP42-203ENST00000426246 LINC00336Q6ZUF6 198 aa8.56□□□□□ -1.04
USP42-203ENST00000426246 SERP1Q9Y6X1 66 aa8.55□□□□□ -1.04
USP42-203ENST00000426246 LINC00208Q96KT6 92 aa8.55□□□□□ -1.04
USP42-203ENST00000426246 B9D2Q9BPU9 175 aa8.55□□□□□ -1.04
USP42-203ENST00000426246 FAM229BQ4G0N7 80 aa8.54□□□□□ -1.04
USP42-203ENST00000426246 RPS28P62857 69 aaKnown RBP8.54□□□□□ -1.04
USP42-203ENST00000426246 H3BQ85 93 aa8.53□□□□□ -1.04
USP42-203ENST00000426246 Q5XG85 94 aa8.53□□□□□ -1.04
USP42-203ENST00000426246 KRTAP1-5Q9BYS1 174 aa8.52□□□□□ -1.05
USP42-203ENST00000426246 Q8NBF4 154 aa8.52□□□□□ -1.05
USP42-203ENST00000426246 ANAPC11Q9NYG5 84 aa8.52□□□□□ -1.05
USP42-203ENST00000426246 KLKP1Q107X0 134 aa8.51□□□□□ -1.05
USP42-203ENST00000426246 SPINK6Q6UWN8 80 aa8.51□□□□□ -1.05
USP42-203ENST00000426246 KRTAP7-1Q8IUC3 87 aa8.49□□□□□ -1.05
USP42-203ENST00000426246 SMIM26A0A096LP01 95 aa8.49□□□□□ -1.05
USP42-203ENST00000426246 IGFL1Q6UW32 110 aa8.49□□□□□ -1.05
USP42-203ENST00000426246 VPS13DQ5THJ4 4388 aa8.49□□□□□ -1.05
USP42-203ENST00000426246 PCOTHQ58A44 107 aa8.48□□□□□ -1.05
USP42-203ENST00000426246 EPM2AB3EWF7 344 aa8.47□□□□□ -1.05
USP42-203ENST00000426246 FP248Q71RG6 208 aaPredicted RBP8.47□□□□□ -1.05
USP42-203ENST00000426246 FBN3Q75N90 2809 aa8.46□□□□□ -1.06
USP42-203ENST00000426246 DSCR10P59022 87 aa8.46□□□□□ -1.06
USP42-203ENST00000426246 OCR1Q9BZK8 76 aa8.46□□□□□ -1.06
USP42-203ENST00000426246 HCG22E2RYF7 251 aa8.45□□□□□ -1.06
USP42-203ENST00000426246 MP68P56378 58 aa8.45□□□□□ -1.06
USP42-203ENST00000426246 KMT2AQ03164 3969 aa8.44□□□□□ -1.06
USP42-203ENST00000426246 KRTAP21-3Q3LHN1 58 aa8.43□□□□□ -1.06
USP42-203ENST00000426246 KRTAP11-1Q8IUC1 163 aa8.43□□□□□ -1.06
USP42-203ENST00000426246 APLNQ9ULZ1 77 aa8.43□□□□□ -1.06
USP42-203ENST00000426246 NDUFC1O43677 76 aa8.42□□□□□ -1.06
USP42-203ENST00000426246 IGLV5-48A0A075B6I7 105 aa8.42□□□□□ -1.06
USP42-203ENST00000426246 CASC2Q6XLA1 102 aa8.41□□□□□ -1.06
USP42-203ENST00000426246 DNAH2Q9P225 4427 aa8.41□□□□□ -1.06
USP42-203ENST00000426246 RETNLBQ9BQ08 111 aa8.4□□□□□ -1.06
USP42-203ENST00000426246 SPTSSBQ8NFR3 76 aa8.4□□□□□ -1.07
USP42-203ENST00000426246 IGHV6-1A0A0B4J1U7 121 aa8.39□□□□□ -1.07
USP42-203ENST00000426246 PANO1I0J062 215 aa8.39□□□□□ -1.07
USP42-203ENST00000426246 C1orf64Q8NEQ6 169 aa8.39□□□□□ -1.07
USP42-203ENST00000426246 H0Y9P7 68 aa8.37□□□□□ -1.07
USP42-203ENST00000426246 CDK2AP2O75956 126 aa8.37□□□□□ -1.07
USP42-203ENST00000426246 C16orf90A8MZG2 172 aa8.37□□□□□ -1.07
USP42-203ENST00000426246 KRTAP4-16G5E9R7 235 aaPredicted RBP8.35□□□□□ -1.07
USP42-203ENST00000426246 HECTD4Q9Y4D8 3996 aa8.35□□□□□ -1.07
USP42-203ENST00000426246 NDUFB1O75438 58 aa8.34□□□□□ -1.07
USP42-203ENST00000426246 C1orf195Q5TG92 126 aa8.33□□□□□ -1.08
USP42-203ENST00000426246 TLX1NBP0CAT3 122 aa8.33□□□□□ -1.08
USP42-203ENST00000426246 MOBPQ13875 183 aa8.32□□□□□ -1.08
USP42-203ENST00000426246 BCE1O60756 84 aa8.31□□□□□ -1.08
USP42-203ENST00000426246 NUPR2A6NF83 97 aa8.31□□□□□ -1.08
USP42-203ENST00000426246 A8MUN3 132 aa8.31□□□□□ -1.08
USP42-203ENST00000426246 SPRR1AP35321 89 aa8.31□□□□□ -1.08
USP42-203ENST00000426246 CIRBP-AS1Q8TBR5 109 aa8.3□□□□□ -1.08
USP42-203ENST00000426246 PRO0628Q9UI54 55 aa8.3□□□□□ -1.08
USP42-203ENST00000426246 DNAH6Q9C0G6 4158 aa8.3□□□□□ -1.08
USP42-203ENST00000426246 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.3□□□□□ -1.08
USP42-203ENST00000426246 F8WDY8 70 aa8.29□□□□□ -1.08
USP42-203ENST00000426246 TNP2Q05952 138 aa8.29□□□□□ -1.08
USP42-203ENST00000426246 FRAS1Q86XX4 4008 aa8.29□□□□□ -1.08
USP42-203ENST00000426246 LY6G6CO95867 125 aa8.28□□□□□ -1.08
USP42-203ENST00000426246 SPRR4Q96PI1 79 aa8.27□□□□□ -1.09
USP42-203ENST00000426246 CHKB-CPT1BH3BT56 60 aa8.27□□□□□ -1.09
USP42-203ENST00000426246 ATP5EP56381 51 aaPredicted RBP8.27□□□□□ -1.09
USP42-203ENST00000426246 PRR15LQ9BU68 103 aa8.26□□□□□ -1.09
USP42-203ENST00000426246 NBDYA0A0U1RRE5 68 aa8.25□□□□□ -1.09
USP42-203ENST00000426246 PRR15Q8IV56 129 aa8.25□□□□□ -1.09
USP42-203ENST00000426246 C14orf177Q52M58 125 aa8.25□□□□□ -1.09
USP42-203ENST00000426246 HYDINQ4G0P3 5121 aa8.25□□□□□ -1.09
USP42-203ENST00000426246 PLA2G2DQ9UNK4 145 aa8.25□□□□□ -1.09
USP42-203ENST00000426246 A8MU10 97 aa8.24□□□□□ -1.09
USP42-203ENST00000426246 V9GYY9 64 aa8.24□□□□□ -1.09
USP42-203ENST00000426246 hDV103S1A0JD37 113 aa8.23□□□□□ -1.09
USP42-203ENST00000426246 Q6ZRN7 208 aaPredicted RBP8.23□□□□□ -1.09
USP42-203ENST00000426246 DNAH17Q9UFH2 4485 aa8.22□□□□□ -1.09
USP42-203ENST00000426246 SPAG11AQ6PDA7 123 aa8.22□□□□□ -1.09
USP42-203ENST00000426246 C9orf163Q8N9P6 203 aa8.22□□□□□ -1.09
USP42-203ENST00000426246 IGLV5-37A0A075B6J1 123 aa8.21□□□□□ -1.09
USP42-203ENST00000426246 CNBPP62633 177 aaKnown RBP8.21□□□□□ -1.09
USP42-203ENST00000426246 ALMS1Q8TCU4 4167 aa8.21□□□□□ -1.1
USP42-203ENST00000426246 TRAV22A0A0B4J277 110 aa8.21□□□□□ -1.1
USP42-203ENST00000426246 A6NED7 52 aa8.18□□□□□ -1.1
USP42-203ENST00000426246 A8MWP4 228 aa8.18□□□□□ -1.1
USP42-203ENST00000426246 PMAIP1Q13794 54 aa8.17□□□□□ -1.1
USP42-203ENST00000426246 PSORS1C2Q9UIG4 136 aa8.17□□□□□ -1.1
USP42-203ENST00000426246 DNAH11Q96DT5 4516 aa8.17□□□□□ -1.1
USP42-203ENST00000426246 RTL8CO15255 209 aa8.17□□□□□ -1.1
USP42-203ENST00000426246 IGLV5-52A0A0A0MRZ9 124 aa8.16□□□□□ -1.1
USP42-203ENST00000426246 FAT2Q9NYQ8 4349 aa8.16□□□□□ -1.1
USP42-203ENST00000426246 Q6ZR54 194 aa8.15□□□□□ -1.1
USP42-203ENST00000426246 A0A087X002 238 aa8.15□□□□□ -1.11
USP42-203ENST00000426246 NOTCH2NLQ7Z3S9 236 aa8.15□□□□□ -1.11
USP42-203ENST00000426246 PKD1P98161 4303 aa8.14□□□□□ -1.11
USP42-203ENST00000426246 DNAH5Q8TE73 4624 aa8.13□□□□□ -1.11
USP42-203ENST00000426246 DNAH8Q96JB1 4490 aa8.13□□□□□ -1.11
USP42-203ENST00000426246 A0A087WTM6 91 aa8.11□□□□□ -1.11
USP42-203ENST00000426246 SACSQ9NZJ4 4579 aa8.1□□□□□ -1.11
USP42-203ENST00000426246 LINC00472Q9H8W2 130 aa8.1□□□□□ -1.11
USP42-203ENST00000426246 A0A1B0GW54 56 aa8.1□□□□□ -1.11
USP42-203ENST00000426246 SEC61GP60059 68 aa8.1□□□□□ -1.11
USP42-203ENST00000426246 COA5Q86WW8 74 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 292.5 ms