RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 SCGB1A1P11684 91 aa8.85□□□□□ -0.99
CDK3-201ENST00000425876 C3orf22Q8N5N4 141 aa8.85□□□□□ -0.99
CDK3-201ENST00000425876 CIRBP-AS1Q8TBR5 109 aa8.85□□□□□ -0.99
CDK3-201ENST00000425876 IGLV8-61A0A075B6I0 122 aa8.83□□□□□ -1
CDK3-201ENST00000425876 F8WEM9 126 aa8.83□□□□□ -1
CDK3-201ENST00000425876 A0A1B0GW54 56 aa8.82□□□□□ -1
CDK3-201ENST00000425876 C1orf137Q5JT78 98 aa8.82□□□□□ -1
CDK3-201ENST00000425876 Q6Q795 121 aa8.82□□□□□ -1
CDK3-201ENST00000425876 TRBV7-7A0A0K0K1E9 115 aa8.82□□□□□ -1
CDK3-201ENST00000425876 ZNF861PO60384 105 aa8.82□□□□□ -1
CDK3-201ENST00000425876 SCXQ7RTU7 201 aa8.82□□□□□ -1
CDK3-201ENST00000425876 UBL5Q9BZL1 73 aa8.82□□□□□ -1
CDK3-201ENST00000425876 Q6JHZ5 121 aa8.81□□□□□ -1
CDK3-201ENST00000425876 IMUPQ9GZP8 106 aa8.81□□□□□ -1
CDK3-201ENST00000425876 ZNF706Q9Y5V0 76 aaPredicted RBP8.79□□□□□ -1
CDK3-201ENST00000425876 SRRM2Q9UQ35 2752 aaKnown RBP8.79□□□□□ -1
CDK3-201ENST00000425876 ATP5EP2Q5VTU8 51 aa8.78□□□□□ -1
CDK3-201ENST00000425876 A0A1B0GVY2 172 aa8.78□□□□□ -1
CDK3-201ENST00000425876 IGLV7-43P04211 117 aa8.78□□□□□ -1
CDK3-201ENST00000425876 LINC00483Q53H64 154 aa8.78□□□□□ -1
CDK3-201ENST00000425876 Q8NBF4 154 aa8.78□□□□□ -1
CDK3-201ENST00000425876 SPRR4Q96PI1 79 aa8.78□□□□□ -1
CDK3-201ENST00000425876 A0A1W2PNM2 257 aa8.77□□□□□ -1.01
CDK3-201ENST00000425876 Q6ZVQ6 151 aa8.76□□□□□ -1.01
CDK3-201ENST00000425876 PKHD1P08F94 4074 aa8.75□□□□□ -1.01
CDK3-201ENST00000425876 IGFL1Q6UW32 110 aa8.74□□□□□ -1.01
CDK3-201ENST00000425876 CRYGAP11844 174 aa8.73□□□□□ -1.01
CDK3-201ENST00000425876 IGKV3D-7A0A0C4DH55 119 aa8.71□□□□□ -1.02
CDK3-201ENST00000425876 PCP4P48539 62 aa8.71□□□□□ -1.02
CDK3-201ENST00000425876 RPL37AP61513 92 aaKnown RBP8.71□□□□□ -1.02
CDK3-201ENST00000425876 HERC2O95714 4834 aa8.7□□□□□ -1.02
CDK3-201ENST00000425876 LRP1BQ9NZR2 4599 aa8.69□□□□□ -1.02
CDK3-201ENST00000425876 CXCL6P80162 114 aa8.69□□□□□ -1.02
CDK3-201ENST00000425876 NREPQ16612 68 aa8.69□□□□□ -1.02
CDK3-201ENST00000425876 HAMPP81172 84 aa8.68□□□□□ -1.02
CDK3-201ENST00000425876 DYNC1H1Q14204 4646 aaKnown RBP8.67□□□□□ -1.02
CDK3-201ENST00000425876 KIAA1109Q2LD37 5005 aa8.66□□□□□ -1.02
CDK3-201ENST00000425876 A0A0G2JQZ4 141 aa8.65□□□□□ -1.03
CDK3-201ENST00000425876 IGLV9-49A0A0B4J1Y8 123 aa8.63□□□□□ -1.03
CDK3-201ENST00000425876 C9orf153Q5TBE3 101 aa8.62□□□□□ -1.03
CDK3-201ENST00000425876 VPS13BQ7Z7G8 4022 aa8.62□□□□□ -1.03
CDK3-201ENST00000425876 FAM236AA0A1B0GUQ0 79 aa8.61□□□□□ -1.03
CDK3-201ENST00000425876 FAM236BA0A1B0GV22 79 aa8.61□□□□□ -1.03
CDK3-201ENST00000425876 HIST1H4AP62805 103 aaKnown RBP8.61□□□□□ -1.03
CDK3-201ENST00000425876 A0A087WSZ3 146 aa8.61□□□□□ -1.03
CDK3-201ENST00000425876 BPY2O14599 106 aa8.61□□□□□ -1.03
CDK3-201ENST00000425876 ANAPC11Q9NYG5 84 aa8.6□□□□□ -1.03
CDK3-201ENST00000425876 MOBPQ13875 183 aa8.59□□□□□ -1.03
CDK3-201ENST00000425876 A0A087WVE0 104 aa8.58□□□□□ -1.04
CDK3-201ENST00000425876 FAM229BQ4G0N7 80 aa8.58□□□□□ -1.04
CDK3-201ENST00000425876 SSBP3-AS1Q7Z2R9 100 aa8.56□□□□□ -1.04
CDK3-201ENST00000425876 ANAPC13Q9BS18 74 aa8.56□□□□□ -1.04
CDK3-201ENST00000425876 APOBP04114 4563 aaKnown RBP8.55□□□□□ -1.04
CDK3-201ENST00000425876 PCLOQ9Y6V0 5065 aa8.55□□□□□ -1.04
CDK3-201ENST00000425876 ATOX1O00244 68 aa8.53□□□□□ -1.04
CDK3-201ENST00000425876 SPINK6Q6UWN8 80 aa8.53□□□□□ -1.04
CDK3-201ENST00000425876 IGKV4-1P06312 121 aa8.52□□□□□ -1.04
CDK3-201ENST00000425876 CD164Q04900 197 aa8.52□□□□□ -1.04
CDK3-201ENST00000425876 KRTAP1-4P0C5Y4 121 aa8.52□□□□□ -1.05
CDK3-201ENST00000425876 DSCR10P59022 87 aa8.52□□□□□ -1.05
CDK3-201ENST00000425876 SS18L2Q9UHA2 77 aa8.52□□□□□ -1.05
CDK3-201ENST00000425876 LINC00472Q9H8W2 130 aa8.51□□□□□ -1.05
CDK3-201ENST00000425876 RYR1P21817 5038 aa8.5□□□□□ -1.05
CDK3-201ENST00000425876 KRTAP17-1Q9BYP8 105 aa8.5□□□□□ -1.05
CDK3-201ENST00000425876 A0A087X002 238 aa8.49□□□□□ -1.05
CDK3-201ENST00000425876 Q8N9L7 120 aa8.49□□□□□ -1.05
CDK3-201ENST00000425876 HSPG2P98160 4391 aa8.49□□□□□ -1.05
CDK3-201ENST00000425876 SMR3BP02814 79 aaPredicted RBP8.48□□□□□ -1.05
CDK3-201ENST00000425876 KRTAP13-2Q52LG2 175 aa8.48□□□□□ -1.05
CDK3-201ENST00000425876 J3KT08 172 aa8.48□□□□□ -1.05
CDK3-201ENST00000425876 CDK2AP2O75956 126 aa8.47□□□□□ -1.05
CDK3-201ENST00000425876 KRTAP10-4P60372 401 aaPredicted RBP8.47□□□□□ -1.05
CDK3-201ENST00000425876 HRCT1Q6UXD1 115 aa8.47□□□□□ -1.05
CDK3-201ENST00000425876 PLA2G1BP04054 148 aaKnown RBP8.45□□□□□ -1.06
CDK3-201ENST00000425876 K7EQZ3 153 aa8.44□□□□□ -1.06
CDK3-201ENST00000425876 DEFB116Q30KQ4 102 aa8.44□□□□□ -1.06
CDK3-201ENST00000425876 ABCA13Q86UQ4 5058 aa8.44□□□□□ -1.06
CDK3-201ENST00000425876 SMIM20Q8N5G0 67 aa8.44□□□□□ -1.06
CDK3-201ENST00000425876 Q96NJ1 140 aa8.44□□□□□ -1.06
CDK3-201ENST00000425876 A8MWP4 228 aa8.43□□□□□ -1.06
CDK3-201ENST00000425876 ASB16-AS1Q495Z4 193 aa8.42□□□□□ -1.06
CDK3-201ENST00000425876 SERP2Q8N6R1 65 aa8.42□□□□□ -1.06
CDK3-201ENST00000425876 FAT1Q14517 4588 aa8.42□□□□□ -1.06
CDK3-201ENST00000425876 PRR15Q8IV56 129 aa8.41□□□□□ -1.06
CDK3-201ENST00000425876 COX7CP15954 63 aa8.4□□□□□ -1.06
CDK3-201ENST00000425876 Q5XG85 94 aa8.4□□□□□ -1.06
CDK3-201ENST00000425876 UQCRQO14949 82 aa8.39□□□□□ -1.07
CDK3-201ENST00000425876 TRAV7A0A075B6U4 112 aa8.39□□□□□ -1.07
CDK3-201ENST00000425876 NDUFB1O75438 58 aa8.38□□□□□ -1.07
CDK3-201ENST00000425876 TYMSOSQ8TAI1 123 aa8.38□□□□□ -1.07
CDK3-201ENST00000425876 HCG22E2RYF7 251 aa8.37□□□□□ -1.07
CDK3-201ENST00000425876 FAM229AH3BQW9 127 aa8.37□□□□□ -1.07
CDK3-201ENST00000425876 KRTAP4-5Q9BYR2 181 aa8.37□□□□□ -1.07
CDK3-201ENST00000425876 CCDC179H3BU77 68 aa8.36□□□□□ -1.07
CDK3-201ENST00000425876 PKHD1L1Q86WI1 4243 aa8.36□□□□□ -1.07
CDK3-201ENST00000425876 Q8N1X5 172 aa8.34□□□□□ -1.07
CDK3-201ENST00000425876 LIMD2Q9BT23 127 aa8.34□□□□□ -1.07
CDK3-201ENST00000425876 C4orf48Q5BLP8 95 aa8.33□□□□□ -1.08
CDK3-201ENST00000425876 PRR26Q8N8Z3 221 aa8.33□□□□□ -1.08
CDK3-201ENST00000425876 KRTAP29-1A8MX34 341 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms