RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 IGLV1-50A0A075B6I6 118 aa8.59□□□□□ -1.03
LRCH3-203ENST00000425562 KRTAP24-1Q3LI83 254 aa8.59□□□□□ -1.03
LRCH3-203ENST00000425562 TNP2Q05952 138 aa8.58□□□□□ -1.04
LRCH3-203ENST00000425562 ZCCHC13Q8WW36 166 aaKnown RBP8.58□□□□□ -1.04
LRCH3-203ENST00000425562 F8WDY8 70 aa8.57□□□□□ -1.04
LRCH3-203ENST00000425562 KRTAP4-16G5E9R7 235 aaPredicted RBP8.56□□□□□ -1.04
LRCH3-203ENST00000425562 LINC01556Q5JQF7 62 aa8.56□□□□□ -1.04
LRCH3-203ENST00000425562 MRPL55Q7Z7F7 128 aaKnown RBP8.56□□□□□ -1.04
LRCH3-203ENST00000425562 IGFL1Q6UW32 110 aa8.56□□□□□ -1.04
LRCH3-203ENST00000425562 SPTSSBQ8NFR3 76 aa8.55□□□□□ -1.04
LRCH3-203ENST00000425562 PMAIP1Q13794 54 aa8.55□□□□□ -1.04
LRCH3-203ENST00000425562 H3BNG1 76 aa8.54□□□□□ -1.04
LRCH3-203ENST00000425562 Q1T7F1 81 aa8.54□□□□□ -1.04
LRCH3-203ENST00000425562 LINC00588Q9Y4M8 146 aa8.54□□□□□ -1.04
LRCH3-203ENST00000425562 SPRR4Q96PI1 79 aa8.53□□□□□ -1.04
LRCH3-203ENST00000425562 MP68P56378 58 aa8.53□□□□□ -1.04
LRCH3-203ENST00000425562 LCE6AA0A183 80 aa8.52□□□□□ -1.04
LRCH3-203ENST00000425562 CHKB-CPT1BH3BT56 60 aa8.52□□□□□ -1.04
LRCH3-203ENST00000425562 REG3GQ6UW15 175 aa8.51□□□□□ -1.05
LRCH3-203ENST00000425562 B9D2Q9BPU9 175 aa8.51□□□□□ -1.05
LRCH3-203ENST00000425562 PRR15Q8IV56 129 aa8.5□□□□□ -1.05
LRCH3-203ENST00000425562 HUWE1Q7Z6Z7 4374 aaKnown RBP8.5□□□□□ -1.05
LRCH3-203ENST00000425562 H0Y9P7 68 aa8.5□□□□□ -1.05
LRCH3-203ENST00000425562 PRR15LQ9BU68 103 aa8.5□□□□□ -1.05
LRCH3-203ENST00000425562 DNAH3Q8TD57 4116 aa8.49□□□□□ -1.05
LRCH3-203ENST00000425562 SPRR1AP35321 89 aa8.49□□□□□ -1.05
LRCH3-203ENST00000425562 DNAH10OSP0CZ25 163 aa8.48□□□□□ -1.05
LRCH3-203ENST00000425562 PCOTHQ58A44 107 aa8.48□□□□□ -1.05
LRCH3-203ENST00000425562 Q5VV11 94 aa8.47□□□□□ -1.05
LRCH3-203ENST00000425562 H0Y9J4 135 aa8.47□□□□□ -1.05
LRCH3-203ENST00000425562 CASC2Q6XLA1 102 aa8.47□□□□□ -1.05
LRCH3-203ENST00000425562 DNAH1Q9P2D7 4330 aa8.47□□□□□ -1.05
LRCH3-203ENST00000425562 UBE2AP49459 152 aa8.46□□□□□ -1.05
LRCH3-203ENST00000425562 CHTF8P0CG12 524 aa8.46□□□□□ -1.06
LRCH3-203ENST00000425562 DNAH9Q9NYC9 4486 aa8.44□□□□□ -1.06
LRCH3-203ENST00000425562 CYP4F30PQ9H0H9 118 aa8.44□□□□□ -1.06
LRCH3-203ENST00000425562 KRTAP11-1Q8IUC1 163 aa8.43□□□□□ -1.06
LRCH3-203ENST00000425562 DNAH7Q8WXX0 4024 aa8.43□□□□□ -1.06
LRCH3-203ENST00000425562 NDUFB1O75438 58 aa8.42□□□□□ -1.06
LRCH3-203ENST00000425562 CNBPP62633 177 aaKnown RBP8.42□□□□□ -1.06
LRCH3-203ENST00000425562 Q8N9P0 234 aaPredicted RBP8.41□□□□□ -1.06
LRCH3-203ENST00000425562 TLX1NBP0CAT3 122 aa8.41□□□□□ -1.06
LRCH3-203ENST00000425562 PHF5AQ7RTV0 110 aaKnown RBP8.41□□□□□ -1.06
LRCH3-203ENST00000425562 A6NED7 52 aa8.4□□□□□ -1.06
LRCH3-203ENST00000425562 C16orf90A8MZG2 172 aa8.4□□□□□ -1.06
LRCH3-203ENST00000425562 A0A1B0GW54 56 aa8.4□□□□□ -1.07
LRCH3-203ENST00000425562 KRTAP1-5Q9BYS1 174 aa8.4□□□□□ -1.07
LRCH3-203ENST00000425562 K7EIL1 84 aa8.39□□□□□ -1.07
LRCH3-203ENST00000425562 PLA2G2DQ9UNK4 145 aa8.38□□□□□ -1.07
LRCH3-203ENST00000425562 SPAG11AQ6PDA7 123 aa8.38□□□□□ -1.07
LRCH3-203ENST00000425562 KRTAP29-1A8MX34 341 aaPredicted RBP8.37□□□□□ -1.07
LRCH3-203ENST00000425562 IGLV5-37A0A075B6J1 123 aa8.37□□□□□ -1.07
LRCH3-203ENST00000425562 NDUFS5O43920 106 aa8.36□□□□□ -1.07
LRCH3-203ENST00000425562 COA5Q86WW8 74 aa8.36□□□□□ -1.07
LRCH3-203ENST00000425562 LCA10Q71F78 164 aa8.35□□□□□ -1.07
LRCH3-203ENST00000425562 IGLV9-49A0A0B4J1Y8 123 aa8.34□□□□□ -1.07
LRCH3-203ENST00000425562 A8MWP4 228 aa8.31□□□□□ -1.08
LRCH3-203ENST00000425562 UBE2DNLQ8IWF7 75 aa8.31□□□□□ -1.08
LRCH3-203ENST00000425562 LIMD2Q9BT23 127 aa8.29□□□□□ -1.08
LRCH3-203ENST00000425562 LINC00472Q9H8W2 130 aa8.29□□□□□ -1.08
LRCH3-203ENST00000425562 CD164Q04900 197 aa8.28□□□□□ -1.08
LRCH3-203ENST00000425562 C9orf163Q8N9P6 203 aa8.28□□□□□ -1.08
LRCH3-203ENST00000425562 IGHV6-1A0A0B4J1U7 121 aa8.27□□□□□ -1.09
LRCH3-203ENST00000425562 MMP24-AS1A0A0U1RRL7 71 aa8.27□□□□□ -1.09
LRCH3-203ENST00000425562 ANAPC11Q9NYG5 84 aa8.27□□□□□ -1.09
LRCH3-203ENST00000425562 PLECQ15149 4684 aaKnown RBP8.26□□□□□ -1.09
LRCH3-203ENST00000425562 SPANXA2-OT1Q8N9U9 137 aa8.25□□□□□ -1.09
LRCH3-203ENST00000425562 PANO1I0J062 215 aa8.25□□□□□ -1.09
LRCH3-203ENST00000425562 RBM12B-AS1Q9P1G2 102 aa8.24□□□□□ -1.09
LRCH3-203ENST00000425562 SPINK7P58062 85 aa8.23□□□□□ -1.09
LRCH3-203ENST00000425562 IGLV8-61A0A075B6I0 122 aa8.23□□□□□ -1.09
LRCH3-203ENST00000425562 KTN1-AS1Q86SY8 53 aa8.22□□□□□ -1.09
LRCH3-203ENST00000425562 A0A087X002 238 aa8.21□□□□□ -1.09
LRCH3-203ENST00000425562 NOTCH2NLQ7Z3S9 236 aa8.21□□□□□ -1.09
LRCH3-203ENST00000425562 SPINK6Q6UWN8 80 aa8.2□□□□□ -1.1
LRCH3-203ENST00000425562 IGLV7-46A0A075B6I9 117 aa8.2□□□□□ -1.1
LRCH3-203ENST00000425562 PRR26Q8N8Z3 221 aa8.2□□□□□ -1.1
LRCH3-203ENST00000425562 LOC101927531A0A1B0GV80 90 aa8.19□□□□□ -1.1
LRCH3-203ENST00000425562 Q75L30 129 aa8.19□□□□□ -1.1
LRCH3-203ENST00000425562 H3BPC8 53 aa8.17□□□□□ -1.1
LRCH3-203ENST00000425562 MDFIQ99750 246 aa8.17□□□□□ -1.1
LRCH3-203ENST00000425562 FRAS1Q86XX4 4008 aa8.17□□□□□ -1.1
LRCH3-203ENST00000425562 TGP01266 2768 aa8.17□□□□□ -1.1
LRCH3-203ENST00000425562 HRES1P13985 223 aa8.16□□□□□ -1.1
LRCH3-203ENST00000425562 ATP11AUNQ6ZP68 121 aa8.16□□□□□ -1.1
LRCH3-203ENST00000425562 APLNQ9ULZ1 77 aa8.16□□□□□ -1.1
LRCH3-203ENST00000425562 MOBPQ13875 183 aa8.16□□□□□ -1.1
LRCH3-203ENST00000425562 RETNLBQ9BQ08 111 aa8.16□□□□□ -1.1
LRCH3-203ENST00000425562 C8orf17Q9NRJ1 99 aa8.15□□□□□ -1.1
LRCH3-203ENST00000425562 A6NN06 94 aa8.14□□□□□ -1.11
LRCH3-203ENST00000425562 Q96NJ1 140 aa8.13□□□□□ -1.11
LRCH3-203ENST00000425562 STARD9Q9P2P6 4700 aa8.13□□□□□ -1.11
LRCH3-203ENST00000425562 CDC42SE1Q9NRR8 79 aa8.13□□□□□ -1.11
LRCH3-203ENST00000425562 KMT2AQ03164 3969 aa8.12□□□□□ -1.11
LRCH3-203ENST00000425562 CDK2AP2O75956 126 aa8.12□□□□□ -1.11
LRCH3-203ENST00000425562 PRAC1Q96KF2 57 aa8.12□□□□□ -1.11
LRCH3-203ENST00000425562 DNHD1Q96M86 4753 aa8.1□□□□□ -1.11
LRCH3-203ENST00000425562 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.1□□□□□ -1.11
LRCH3-203ENST00000425562 SPRR1BP22528 89 aa8.09□□□□□ -1.11
LRCH3-203ENST00000425562 PRKDCP78527 4128 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms