RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 BVES-AS1Q5T3Y7 98 aa7.24□□□□□ -1.25
VRK3-203ENST00000424804 Q6ZQY7 126 aa7.24□□□□□ -1.25
VRK3-203ENST00000424804 SMIM29Q86T20 159 aa7.24□□□□□ -1.25
VRK3-203ENST00000424804 CEND1Q8N111 149 aa7.24□□□□□ -1.25
VRK3-203ENST00000424804 A0A0G2JQZ4 141 aa7.23□□□□□ -1.25
VRK3-203ENST00000424804 F8WEM9 126 aa7.23□□□□□ -1.25
VRK3-203ENST00000424804 RPS29P62273 56 aaKnown RBP7.23□□□□□ -1.25
VRK3-203ENST00000424804 LIMD2Q9BT23 127 aa7.22□□□□□ -1.25
VRK3-203ENST00000424804 A0A0B4J2C4 111 aa7.21□□□□□ -1.26
VRK3-203ENST00000424804 TMEM238LA0A1B0GVL6 79 aa7.21□□□□□ -1.26
VRK3-203ENST00000424804 A6NJY4 79 aa7.21□□□□□ -1.26
VRK3-203ENST00000424804 FXYD2P54710 66 aa7.2□□□□□ -1.26
VRK3-203ENST00000424804 LCE2CQ5TA81 110 aa7.18□□□□□ -1.26
VRK3-203ENST00000424804 PRO1854Q9UHT4 67 aa7.18□□□□□ -1.26
VRK3-203ENST00000424804 SNCGO76070 127 aa7.17□□□□□ -1.26
VRK3-203ENST00000424804 HSD52Q0P140 79 aa7.17□□□□□ -1.26
VRK3-203ENST00000424804 LCE2DQ5TA82 110 aaPredicted RBP7.17□□□□□ -1.26
VRK3-203ENST00000424804 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.17□□□□□ -1.26
VRK3-203ENST00000424804 SNHG12Q9BXW3 62 aa7.17□□□□□ -1.26
VRK3-203ENST00000424804 UQCR10Q9UDW1 63 aa7.17□□□□□ -1.26
VRK3-203ENST00000424804 CD164Q04900 197 aa7.16□□□□□ -1.26
VRK3-203ENST00000424804 KRTAP19-2Q3LHN2 52 aa7.16□□□□□ -1.26
VRK3-203ENST00000424804 XP32Q5T750 250 aa7.16□□□□□ -1.26
VRK3-203ENST00000424804 H0YGX0 51 aa7.15□□□□□ -1.26
VRK3-203ENST00000424804 K7ERJ3 54 aa7.15□□□□□ -1.26
VRK3-203ENST00000424804 PSMB2P49721 201 aa7.14□□□□□ -1.27
VRK3-203ENST00000424804 SEC61BP60468 96 aaKnown RBP7.14□□□□□ -1.27
VRK3-203ENST00000424804 FAM218AQ96MZ4 157 aa7.14□□□□□ -1.27
VRK3-203ENST00000424804 C9orf92A6NGG3 77 aa7.12□□□□□ -1.27
VRK3-203ENST00000424804 H3BUT2 72 aa7.12□□□□□ -1.27
VRK3-203ENST00000424804 TRIAP1O43715 76 aa7.12□□□□□ -1.27
VRK3-203ENST00000424804 OCIAD2Q56VL3 154 aa7.12□□□□□ -1.27
VRK3-203ENST00000424804 Q6JHZ5 121 aa7.11□□□□□ -1.27
VRK3-203ENST00000424804 IGFL1Q6UW32 110 aa7.11□□□□□ -1.27
VRK3-203ENST00000424804 PPDPFLQ8WWR9 84 aa7.11□□□□□ -1.27
VRK3-203ENST00000424804 CLEC2BQ92478 149 aa7.11□□□□□ -1.27
VRK3-203ENST00000424804 TCL1BO95988 128 aa7.1□□□□□ -1.27
VRK3-203ENST00000424804 FABP2P12104 132 aa7.09□□□□□ -1.27
VRK3-203ENST00000424804 C1orf195Q5TG92 126 aa7.08□□□□□ -1.28
VRK3-203ENST00000424804 IGLV8-61A0A075B6I0 122 aa7.07□□□□□ -1.28
VRK3-203ENST00000424804 DNAL4O96015 105 aa7.07□□□□□ -1.28
VRK3-203ENST00000424804 COX6CP09669 75 aa7.07□□□□□ -1.28
VRK3-203ENST00000424804 NDUFV3P56181 108 aaKnown RBP7.07□□□□□ -1.28
VRK3-203ENST00000424804 FSIP2Q5CZC0 6907 aa7.07□□□□□ -1.28
VRK3-203ENST00000424804 A0A1B0GV72 72 aa7.06□□□□□ -1.28
VRK3-203ENST00000424804 A0A1B0GX51 115 aa7.06□□□□□ -1.28
VRK3-203ENST00000424804 Q5XG85 94 aa7.06□□□□□ -1.28
VRK3-203ENST00000424804 TRBV7-7A0A0K0K1E9 115 aa7.05□□□□□ -1.28
VRK3-203ENST00000424804 GHRHP01286 108 aa7.05□□□□□ -1.28
VRK3-203ENST00000424804 H3BMG7 143 aa7.04□□□□□ -1.28
VRK3-203ENST00000424804 SCGB1C2P0DMR2 95 aa7.04□□□□□ -1.28
VRK3-203ENST00000424804 MT1HP80294 61 aa7.04□□□□□ -1.28
VRK3-203ENST00000424804 ORMDL1Q9P0S3 153 aa7.03□□□□□ -1.28
VRK3-203ENST00000424804 CRCT1Q9UGL9 99 aa7.03□□□□□ -1.28
VRK3-203ENST00000424804 FLGP20930 4061 aaPredicted RBP7.02□□□□□ -1.28
VRK3-203ENST00000424804 SMIM6P0DI80 62 aa7.02□□□□□ -1.29
VRK3-203ENST00000424804 PCOTHQ58A44 107 aa7.01□□□□□ -1.29
VRK3-203ENST00000424804 M0R143 59 aa6.99□□□□□ -1.29
VRK3-203ENST00000424804 LST1O00453 97 aa6.99□□□□□ -1.29
VRK3-203ENST00000424804 TEN1Q86WV5 123 aa6.98□□□□□ -1.29
VRK3-203ENST00000424804 A0A087WSZ3 146 aa6.97□□□□□ -1.29
VRK3-203ENST00000424804 NAA38Q9BRA0 125 aaKnown RBP6.97□□□□□ -1.29
VRK3-203ENST00000424804 SS18L2Q9UHA2 77 aa6.97□□□□□ -1.29
VRK3-203ENST00000424804 TSTD3H0UI37 97 aa6.96□□□□□ -1.3
VRK3-203ENST00000424804 TMEM256-PLSCR3K7ERE1 68 aa6.96□□□□□ -1.3
VRK3-203ENST00000424804 LORP23490 312 aaPredicted RBP6.96□□□□□ -1.3
VRK3-203ENST00000424804 BATFQ16520 125 aa6.96□□□□□ -1.3
VRK3-203ENST00000424804 ANKRD29Q8N6D5 301 aa6.96□□□□□ -1.3
VRK3-203ENST00000424804 H3BQ85 93 aa6.95□□□□□ -1.3
VRK3-203ENST00000424804 Q6Q795 121 aa6.95□□□□□ -1.3
VRK3-203ENST00000424804 TRACP01848 142 aa6.94□□□□□ -1.3
VRK3-203ENST00000424804 KRTAP10-6P60371 365 aaPredicted RBP6.93□□□□□ -1.3
VRK3-203ENST00000424804 VPS25Q9BRG1 176 aa6.93□□□□□ -1.3
VRK3-203ENST00000424804 LOC105371267A0A1B0GV96 52 aa6.92□□□□□ -1.3
VRK3-203ENST00000424804 A0A1W2PNM2 257 aa6.92□□□□□ -1.3
VRK3-203ENST00000424804 OBSCN-AS1Q96MR7 158 aa6.91□□□□□ -1.3
VRK3-203ENST00000424804 BAALC-AS2P0C853 105 aa6.9□□□□□ -1.3
VRK3-203ENST00000424804 UBE2V1Q13404 147 aa6.9□□□□□ -1.3
VRK3-203ENST00000424804 SIGMAR1Q99720 223 aa6.9□□□□□ -1.3
VRK3-203ENST00000424804 CCKP06307 115 aa6.89□□□□□ -1.31
VRK3-203ENST00000424804 RPL37P61927 97 aaKnown RBP6.89□□□□□ -1.31
VRK3-203ENST00000424804 ATXN8Q156A1 80 aa6.89□□□□□ -1.31
VRK3-203ENST00000424804 TRBV7-4A0A0J9YYF1 115 aa6.87□□□□□ -1.31
VRK3-203ENST00000424804 RBM3P98179 157 aaKnown RBP6.87□□□□□ -1.31
VRK3-203ENST00000424804 Q96NJ1 140 aa6.87□□□□□ -1.31
VRK3-203ENST00000424804 DSCR8Q96T75 97 aa6.87□□□□□ -1.31
VRK3-203ENST00000424804 IGKV4-1P06312 121 aa6.85□□□□□ -1.31
VRK3-203ENST00000424804 DEFB116Q30KQ4 102 aa6.85□□□□□ -1.31
VRK3-203ENST00000424804 LYRM7Q5U5X0 104 aa6.84□□□□□ -1.31
VRK3-203ENST00000424804 C9JAW5 83 aa6.83□□□□□ -1.32
VRK3-203ENST00000424804 DSCR10P59022 87 aa6.83□□□□□ -1.32
VRK3-203ENST00000424804 ATP11AUNQ6ZP68 121 aa6.82□□□□□ -1.32
VRK3-203ENST00000424804 Q75L30 129 aa6.79□□□□□ -1.32
VRK3-203ENST00000424804 TRBV20-1A0A075B6N2 111 aa6.78□□□□□ -1.32
VRK3-203ENST00000424804 C9orf118A6NHY6 69 aa6.78□□□□□ -1.32
VRK3-203ENST00000424804 JMJD7-PLA2G4BH0Y9G9 81 aa6.78□□□□□ -1.32
VRK3-203ENST00000424804 IGHV6-1A0A0B4J1U7 121 aa6.77□□□□□ -1.33
VRK3-203ENST00000424804 TAX1BP3O14907 124 aa6.77□□□□□ -1.33
VRK3-203ENST00000424804 LINC00313P59037 77 aa6.77□□□□□ -1.33
VRK3-203ENST00000424804 MTURNQ8N3F0 131 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms