RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 TRBV10-3A0A0K0K1G6 114 aa3.12□□□□□ -1.91
SDCBP-203ENST00000424270 E9PLD3 99 aa3.12□□□□□ -1.91
SDCBP-203ENST00000424270 DDTP30046 118 aa3.12□□□□□ -1.91
SDCBP-203ENST00000424270 SPRR1AP35321 89 aa3.12□□□□□ -1.91
SDCBP-203ENST00000424270 KRTDAPP60985 99 aa3.12□□□□□ -1.91
SDCBP-203ENST00000424270 PMVKQ15126 192 aa3.12□□□□□ -1.91
SDCBP-203ENST00000424270 PMCHL1Q16048 86 aa3.12□□□□□ -1.91
SDCBP-203ENST00000424270 C4orf26Q17RF5 130 aa3.12□□□□□ -1.91
SDCBP-203ENST00000424270 FA2HQ7L5A8 372 aa3.12□□□□□ -1.91
SDCBP-203ENST00000424270 ORMDL3Q8N138 153 aa3.12□□□□□ -1.91
SDCBP-203ENST00000424270 MPLKIPQ8TAP9 179 aa3.12□□□□□ -1.91
SDCBP-203ENST00000424270 LAMTOR3Q9UHA4 124 aa3.12□□□□□ -1.91
SDCBP-203ENST00000424270 PRO0628Q9UI54 55 aa3.12□□□□□ -1.91
SDCBP-203ENST00000424270 HSPB8Q9UJY1 196 aa3.12□□□□□ -1.91
SDCBP-203ENST00000424270 LINC00587B1AMM8 73 aa3.11□□□□□ -1.91
SDCBP-203ENST00000424270 C3orf79P0CE67 100 aa3.11□□□□□ -1.91
SDCBP-203ENST00000424270 ORMDL2Q53FV1 153 aa3.11□□□□□ -1.91
SDCBP-203ENST00000424270 Q6ZRX8 168 aa3.11□□□□□ -1.91
SDCBP-203ENST00000424270 SMIM29Q86T20 159 aa3.11□□□□□ -1.91
SDCBP-203ENST00000424270 ST20-AS1Q8NBB2 130 aa3.11□□□□□ -1.91
SDCBP-203ENST00000424270 PRELID3AQ96N28 172 aa3.11□□□□□ -1.91
SDCBP-203ENST00000424270 SIGMAR1Q99720 223 aa3.11□□□□□ -1.91
SDCBP-203ENST00000424270 Q9BRP9 147 aa3.11□□□□□ -1.91
SDCBP-203ENST00000424270 LINC01546A6NGU7 62 aa3.1□□□□□ -1.91
SDCBP-203ENST00000424270 LEPROTL1O95214 131 aa3.1□□□□□ -1.91
SDCBP-203ENST00000424270 FAM218AQ96MZ4 157 aa3.1□□□□□ -1.91
SDCBP-203ENST00000424270 MIEN1Q9BRT3 115 aa3.1□□□□□ -1.91
SDCBP-203ENST00000424270 VAMP8Q9BV40 100 aa3.1□□□□□ -1.91
SDCBP-203ENST00000424270 PRO1933Q9H354 126 aa3.1□□□□□ -1.91
SDCBP-203ENST00000424270 NXT2Q9NPJ8 142 aaKnown RBP3.1□□□□□ -1.91
SDCBP-203ENST00000424270 IGIPA6NJ69 53 aa3.09□□□□□ -1.91
SDCBP-203ENST00000424270 SYS1-DBNDD2H3BUS1 97 aa3.09□□□□□ -1.91
SDCBP-203ENST00000424270 TCL1BO95988 128 aa3.09□□□□□ -1.91
SDCBP-203ENST00000424270 SPRR2EP22531 72 aa3.09□□□□□ -1.91
SDCBP-203ENST00000424270 KRTAP5-9P26371 169 aa3.09□□□□□ -1.91
SDCBP-203ENST00000424270 SPRR2BP35325 72 aa3.09□□□□□ -1.91
SDCBP-203ENST00000424270 SPRR2AP35326 72 aa3.09□□□□□ -1.91
SDCBP-203ENST00000424270 SCGB3A1Q96QR1 104 aa3.09□□□□□ -1.91
SDCBP-203ENST00000424270 K7EMI3 77 aa3.08□□□□□ -1.92
SDCBP-203ENST00000424270 Q1RN00 199 aa3.08□□□□□ -1.92
SDCBP-203ENST00000424270 Q8N8P6 123 aa3.08□□□□□ -1.92
SDCBP-203ENST00000424270 OR13C6PQ8NH95 151 aa3.08□□□□□ -1.92
SDCBP-203ENST00000424270 C14orf144Q96I85 54 aa3.08□□□□□ -1.92
SDCBP-203ENST00000424270 Q96NJ1 140 aa3.08□□□□□ -1.92
SDCBP-203ENST00000424270 UQCR10Q9UDW1 63 aa3.08□□□□□ -1.92
SDCBP-203ENST00000424270 LOC107984156A0A0G2JMH3 177 aa3.07□□□□□ -1.92
SDCBP-203ENST00000424270 LINC01549A6NIU2 74 aa3.07□□□□□ -1.92
SDCBP-203ENST00000424270 M0R143 59 aa3.07□□□□□ -1.92
SDCBP-203ENST00000424270 HBDP02042 147 aa3.07□□□□□ -1.92
SDCBP-203ENST00000424270 IGLC3P0DOY3 106 aa3.07□□□□□ -1.92
SDCBP-203ENST00000424270 HINT1P49773 126 aaPredicted RBP3.07□□□□□ -1.92
SDCBP-203ENST00000424270 SPATA45Q537H7 98 aa3.07□□□□□ -1.92
SDCBP-203ENST00000424270 MEIG1Q5JSS6 88 aa3.07□□□□□ -1.92
SDCBP-203ENST00000424270 S100A7L2Q5SY68 101 aa3.07□□□□□ -1.92
SDCBP-203ENST00000424270 LINC01545Q5VT33 79 aa3.07□□□□□ -1.92
SDCBP-203ENST00000424270 SFTA2Q6UW10 78 aa3.07□□□□□ -1.92
SDCBP-203ENST00000424270 ARL17AQ8IVW1 177 aa3.07□□□□□ -1.92
SDCBP-203ENST00000424270 SMIM20Q8N5G0 67 aa3.07□□□□□ -1.92
SDCBP-203ENST00000424270 DEFB105AQ8NG35 78 aa3.07□□□□□ -1.92
SDCBP-203ENST00000424270 IFI27L1Q96BM0 104 aa3.07□□□□□ -1.92
SDCBP-203ENST00000424270 HIST1H4GQ99525 98 aa3.07□□□□□ -1.92
SDCBP-203ENST00000424270 A0A0G2JQZ4 141 aa3.06□□□□□ -1.92
SDCBP-203ENST00000424270 IGLV5-39A0A0G2JS06 123 aa3.06□□□□□ -1.92
SDCBP-203ENST00000424270 A8MWP4 228 aa3.06□□□□□ -1.92
SDCBP-203ENST00000424270 PMCHL2Q9BQD1 86 aa3.06□□□□□ -1.92
SDCBP-203ENST00000424270 A0A096LNJ9 63 aa3.05□□□□□ -1.92
SDCBP-203ENST00000424270 Q5XG85 94 aa3.05□□□□□ -1.92
SDCBP-203ENST00000424270 CST9LQ9H4G1 147 aa3.05□□□□□ -1.92
SDCBP-203ENST00000424270 DLEU1O43261 78 aa3.04□□□□□ -1.92
SDCBP-203ENST00000424270 SMIM13P0DJ93 91 aa3.04□□□□□ -1.92
SDCBP-203ENST00000424270 BATFQ16520 125 aa3.04□□□□□ -1.92
SDCBP-203ENST00000424270 COL5A1-AS1Q5SY13 56 aa3.04□□□□□ -1.92
SDCBP-203ENST00000424270 ATOH7Q8N100 152 aa3.04□□□□□ -1.92
SDCBP-203ENST00000424270 TOMM6Q96B49 74 aa3.04□□□□□ -1.92
SDCBP-203ENST00000424270 SNHG12Q9BXW3 62 aa3.04□□□□□ -1.92
SDCBP-203ENST00000424270 TRAV23DV6A0A075B6W5 121 aa3.03□□□□□ -1.92
SDCBP-203ENST00000424270 TRAV12-1A0A0B4J245 112 aa3.03□□□□□ -1.92
SDCBP-203ENST00000424270 DPM2O94777 84 aa3.03□□□□□ -1.92
SDCBP-203ENST00000424270 COX8AP10176 69 aa3.03□□□□□ -1.92
SDCBP-203ENST00000424270 PLNP26678 52 aa3.03□□□□□ -1.92
SDCBP-203ENST00000424270 IGFL1Q6UW32 110 aa3.03□□□□□ -1.92
SDCBP-203ENST00000424270 MIR7-3HGQ8N6C7 128 aa3.03□□□□□ -1.92
SDCBP-203ENST00000424270 SPANXCQ9NY87 97 aa3.03□□□□□ -1.92
SDCBP-203ENST00000424270 ZNF73O43830 326 aaPredicted RBP3.02□□□□□ -1.93
SDCBP-203ENST00000424270 IGKCP01834 107 aa3.02□□□□□ -1.93
SDCBP-203ENST00000424270 TMEM170BQ5T4T1 132 aa3.02□□□□□ -1.93
SDCBP-203ENST00000424270 NOTCH2NLQ7Z3S9 236 aa3.02□□□□□ -1.93
SDCBP-203ENST00000424270 SPRR2FQ96RM1 72 aa3.02□□□□□ -1.93
SDCBP-203ENST00000424270 A0A1B0GV90 55 aa3.01□□□□□ -1.93
SDCBP-203ENST00000424270 SPRR1BP22528 89 aa3.01□□□□□ -1.93
SDCBP-203ENST00000424270 PSMB2P49721 201 aa3.01□□□□□ -1.93
SDCBP-203ENST00000424270 ZNF22P17026 224 aaPredicted RBP3□□□□□ -1.93
SDCBP-203ENST00000424270 SCGB1D4Q6XE38 83 aa3□□□□□ -1.93
SDCBP-203ENST00000424270 VPS25Q9BRG1 176 aa3□□□□□ -1.93
SDCBP-203ENST00000424270 DHRS4-AS1Q9P1J3 65 aa3□□□□□ -1.93
SDCBP-203ENST00000424270 HIGD1BQ9P298 99 aa3□□□□□ -1.93
SDCBP-203ENST00000424270 TRBV10-2A0A0K0K1G8 114 aa2.99□□□□□ -1.93
SDCBP-203ENST00000424270 NDUFS5O43920 106 aa2.99□□□□□ -1.93
SDCBP-203ENST00000424270 SPRR2DP22532 72 aa2.99□□□□□ -1.93
SDCBP-203ENST00000424270 HERVK_113P61574 105 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms