RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 IGFL1Q6UW32 110 aa7.42□□□□□ -1.22
PTPRN-204ENST00000423636 PDE6GP18545 87 aa7.42□□□□□ -1.22
PTPRN-204ENST00000423636 K7EQZ3 153 aa7.41□□□□□ -1.22
PTPRN-204ENST00000423636 C9orf163Q8N9P6 203 aa7.41□□□□□ -1.22
PTPRN-204ENST00000423636 IGKV4-1P06312 121 aa7.41□□□□□ -1.22
PTPRN-204ENST00000423636 WFDC13Q8IUB5 93 aa7.41□□□□□ -1.22
PTPRN-204ENST00000423636 PLA2G2DQ9UNK4 145 aa7.41□□□□□ -1.22
PTPRN-204ENST00000423636 DYNC2H1Q8NCM8 4307 aaKnown RBP7.41□□□□□ -1.22
PTPRN-204ENST00000423636 NUPR2A6NF83 97 aa7.4□□□□□ -1.22
PTPRN-204ENST00000423636 CNBPP62633 177 aaKnown RBP7.4□□□□□ -1.22
PTPRN-204ENST00000423636 Q6ZRN7 208 aaPredicted RBP7.4□□□□□ -1.22
PTPRN-204ENST00000423636 IGLV5-48A0A075B6I7 105 aa7.4□□□□□ -1.22
PTPRN-204ENST00000423636 F8WDY8 70 aa7.4□□□□□ -1.23
PTPRN-204ENST00000423636 ATP5EP2Q5VTU8 51 aa7.4□□□□□ -1.23
PTPRN-204ENST00000423636 IGLV5-37A0A075B6J1 123 aa7.39□□□□□ -1.23
PTPRN-204ENST00000423636 C5orf47Q569G3 176 aa7.39□□□□□ -1.23
PTPRN-204ENST00000423636 CRYGAP11844 174 aa7.38□□□□□ -1.23
PTPRN-204ENST00000423636 Q8NBF4 154 aa7.38□□□□□ -1.23
PTPRN-204ENST00000423636 DNAH8Q96JB1 4490 aa7.38□□□□□ -1.23
PTPRN-204ENST00000423636 PKIGQ9Y2B9 76 aa7.38□□□□□ -1.23
PTPRN-204ENST00000423636 A0A087WTM6 91 aa7.37□□□□□ -1.23
PTPRN-204ENST00000423636 TNP2Q05952 138 aa7.37□□□□□ -1.23
PTPRN-204ENST00000423636 CXCL6P80162 114 aa7.37□□□□□ -1.23
PTPRN-204ENST00000423636 A0A0U1RQV1 116 aa7.36□□□□□ -1.23
PTPRN-204ENST00000423636 RTL8CO15255 209 aa7.36□□□□□ -1.23
PTPRN-204ENST00000423636 PRR4Q16378 134 aa7.36□□□□□ -1.23
PTPRN-204ENST00000423636 OXTP01178 125 aa7.35□□□□□ -1.23
PTPRN-204ENST00000423636 DSCR10P59022 87 aa7.35□□□□□ -1.23
PTPRN-204ENST00000423636 MPLKIPQ8TAP9 179 aa7.35□□□□□ -1.23
PTPRN-204ENST00000423636 C14orf177Q52M58 125 aa7.34□□□□□ -1.24
PTPRN-204ENST00000423636 H3BQ85 93 aa7.33□□□□□ -1.24
PTPRN-204ENST00000423636 TRAV7A0A075B6U4 112 aa7.32□□□□□ -1.24
PTPRN-204ENST00000423636 IGLV5-52A0A0A0MRZ9 124 aa7.32□□□□□ -1.24
PTPRN-204ENST00000423636 TMEM258P61165 79 aa7.32□□□□□ -1.24
PTPRN-204ENST00000423636 PSORS1C2Q9UIG4 136 aa7.32□□□□□ -1.24
PTPRN-204ENST00000423636 FAM236DA0A1B0GTK5 79 aa7.31□□□□□ -1.24
PTPRN-204ENST00000423636 FAM236CP0DP71 79 aa7.31□□□□□ -1.24
PTPRN-204ENST00000423636 KRTAP10-2P60368 255 aa7.3□□□□□ -1.24
PTPRN-204ENST00000423636 BRK1Q8WUW1 75 aa7.3□□□□□ -1.24
PTPRN-204ENST00000423636 H0Y9J4 135 aa7.29□□□□□ -1.24
PTPRN-204ENST00000423636 PKHD1P08F94 4074 aa7.29□□□□□ -1.24
PTPRN-204ENST00000423636 SPACA4Q8TDM5 124 aa7.29□□□□□ -1.24
PTPRN-204ENST00000423636 LRP1BQ9NZR2 4599 aa7.28□□□□□ -1.24
PTPRN-204ENST00000423636 H7BZZ5 65 aa7.28□□□□□ -1.24
PTPRN-204ENST00000423636 C1orf134Q5TEV5 83 aa7.28□□□□□ -1.24
PTPRN-204ENST00000423636 DNAH5Q8TE73 4624 aa7.28□□□□□ -1.24
PTPRN-204ENST00000423636 TMEM254Q8TBM7 123 aa7.28□□□□□ -1.24
PTPRN-204ENST00000423636 MOBPQ13875 183 aa7.27□□□□□ -1.24
PTPRN-204ENST00000423636 SPINK6Q6UWN8 80 aa7.27□□□□□ -1.25
PTPRN-204ENST00000423636 BCE1O60756 84 aa7.27□□□□□ -1.25
PTPRN-204ENST00000423636 SPRR4Q96PI1 79 aa7.26□□□□□ -1.25
PTPRN-204ENST00000423636 FAT2Q9NYQ8 4349 aa7.26□□□□□ -1.25
PTPRN-204ENST00000423636 OCR1Q9BZK8 76 aa7.24□□□□□ -1.25
PTPRN-204ENST00000423636 Q6ZR54 194 aa7.22□□□□□ -1.25
PTPRN-204ENST00000423636 LINC00474Q9P2X8 69 aa7.22□□□□□ -1.25
PTPRN-204ENST00000423636 CIRBP-AS1Q8TBR5 109 aa7.21□□□□□ -1.25
PTPRN-204ENST00000423636 ALMS1Q8TCU4 4167 aa7.21□□□□□ -1.26
PTPRN-204ENST00000423636 HCG22E2RYF7 251 aa7.21□□□□□ -1.26
PTPRN-204ENST00000423636 VPS13BQ7Z7G8 4022 aa7.19□□□□□ -1.26
PTPRN-204ENST00000423636 LINC00336Q6ZUF6 198 aa7.19□□□□□ -1.26
PTPRN-204ENST00000423636 KRTAP13-1Q8IUC0 172 aa7.18□□□□□ -1.26
PTPRN-204ENST00000423636 IGHV6-1A0A0B4J1U7 121 aa7.18□□□□□ -1.26
PTPRN-204ENST00000423636 A0A087X002 238 aa7.17□□□□□ -1.26
PTPRN-204ENST00000423636 KLKP1Q107X0 134 aa7.17□□□□□ -1.26
PTPRN-204ENST00000423636 Q5XG85 94 aa7.17□□□□□ -1.26
PTPRN-204ENST00000423636 NOTCH2NLQ7Z3S9 236 aa7.17□□□□□ -1.26
PTPRN-204ENST00000423636 NDUFS5O43920 106 aa7.17□□□□□ -1.26
PTPRN-204ENST00000423636 FAM229BQ4G0N7 80 aa7.17□□□□□ -1.26
PTPRN-204ENST00000423636 LINC00208Q96KT6 92 aa7.16□□□□□ -1.26
PTPRN-204ENST00000423636 RPS28P62857 69 aaKnown RBP7.16□□□□□ -1.26
PTPRN-204ENST00000423636 CASC2Q6XLA1 102 aa7.15□□□□□ -1.26
PTPRN-204ENST00000423636 KRTAP10-1P60331 282 aa7.15□□□□□ -1.27
PTPRN-204ENST00000423636 RETNLBQ9BQ08 111 aa7.15□□□□□ -1.27
PTPRN-204ENST00000423636 ZNF861PO60384 105 aa7.13□□□□□ -1.27
PTPRN-204ENST00000423636 FAT1Q14517 4588 aa7.13□□□□□ -1.27
PTPRN-204ENST00000423636 SMR3BP02814 79 aaPredicted RBP7.13□□□□□ -1.27
PTPRN-204ENST00000423636 WWC2-AS2Q96NR7 200 aa7.13□□□□□ -1.27
PTPRN-204ENST00000423636 LINC00472Q9H8W2 130 aa7.13□□□□□ -1.27
PTPRN-204ENST00000423636 PKD1P98161 4303 aa7.13□□□□□ -1.27
PTPRN-204ENST00000423636 PRR15Q8IV56 129 aa7.12□□□□□ -1.27
PTPRN-204ENST00000423636 SERP1Q9Y6X1 66 aa7.12□□□□□ -1.27
PTPRN-204ENST00000423636 KMT2CQ8NEZ4 4911 aaKnown RBP7.11□□□□□ -1.27
PTPRN-204ENST00000423636 IGLV8-61A0A075B6I0 122 aa7.11□□□□□ -1.27
PTPRN-204ENST00000423636 PCOTHQ58A44 107 aa7.11□□□□□ -1.27
PTPRN-204ENST00000423636 PLAC8Q9NZF1 115 aa7.11□□□□□ -1.27
PTPRN-204ENST00000423636 SPRR1BP22528 89 aa7.09□□□□□ -1.27
PTPRN-204ENST00000423636 IGLV7-43P04211 117 aa7.09□□□□□ -1.27
PTPRN-204ENST00000423636 SMIM26A0A096LP01 95 aa7.09□□□□□ -1.28
PTPRN-204ENST00000423636 SACSQ9NZJ4 4579 aa7.08□□□□□ -1.28
PTPRN-204ENST00000423636 A8MWP4 228 aa7.08□□□□□ -1.28
PTPRN-204ENST00000423636 PSPHP1O15172 72 aa7.08□□□□□ -1.28
PTPRN-204ENST00000423636 H0Y9P7 68 aa7.07□□□□□ -1.28
PTPRN-204ENST00000423636 Q96NJ1 140 aa7.07□□□□□ -1.28
PTPRN-204ENST00000423636 hDV103S1A0JD37 113 aa7.06□□□□□ -1.28
PTPRN-204ENST00000423636 NDUFB1O75438 58 aa7.04□□□□□ -1.28
PTPRN-204ENST00000423636 FP248Q71RG6 208 aaPredicted RBP7.04□□□□□ -1.28
PTPRN-204ENST00000423636 MMP24-AS1A0A0U1RRL7 71 aa7.04□□□□□ -1.28
PTPRN-204ENST00000423636 KRTAP29-1A8MX34 341 aaPredicted RBP7.04□□□□□ -1.28
PTPRN-204ENST00000423636 CDK2AP2O75956 126 aa7.04□□□□□ -1.28
PTPRN-204ENST00000423636 PRO0628Q9UI54 55 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms