RNA–Protein interactions for RNA: ENST00000422863.1

HLA-DQA1-204, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-204ENST00000422863 FAM236CP0DP71 79 aa3.73□□□□□ -1.81
HLA-DQA1-204ENST00000422863 LGALS3P17931 250 aaKnown RBP3.73□□□□□ -1.81
HLA-DQA1-204ENST00000422863 HERV-K104P63124 156 aa3.73□□□□□ -1.81
HLA-DQA1-204ENST00000422863 C20orf166-AS1Q96NR2 134 aa3.73□□□□□ -1.81
HLA-DQA1-204ENST00000422863 MAP1LC3CQ9BXW4 147 aa3.73□□□□□ -1.81
HLA-DQA1-204ENST00000422863 SPANXB1Q9NS25 103 aaPredicted RBP3.73□□□□□ -1.81
HLA-DQA1-204ENST00000422863 LOC107984156A0A0G2JMH3 177 aa3.72□□□□□ -1.81
HLA-DQA1-204ENST00000422863 MYMXA0A1B0GTQ4 84 aa3.72□□□□□ -1.81
HLA-DQA1-204ENST00000422863 HINT1P49773 126 aaPredicted RBP3.72□□□□□ -1.81
HLA-DQA1-204ENST00000422863 Q75L30 129 aa3.72□□□□□ -1.81
HLA-DQA1-204ENST00000422863 ARL17AQ8IVW1 177 aa3.72□□□□□ -1.81
HLA-DQA1-204ENST00000422863 RPS10P5Q9NQ39 176 aa3.72□□□□□ -1.81
HLA-DQA1-204ENST00000422863 Q96NJ1 140 aa3.71□□□□□ -1.82
HLA-DQA1-204ENST00000422863 MIEN1Q9BRT3 115 aa3.71□□□□□ -1.82
HLA-DQA1-204ENST00000422863 NEBP20929 6669 aa3.71□□□□□ -1.82
HLA-DQA1-204ENST00000422863 TCL1BO95988 128 aa3.7□□□□□ -1.82
HLA-DQA1-204ENST00000422863 TSPEAR-AS2P59090 65 aa3.7□□□□□ -1.82
HLA-DQA1-204ENST00000422863 SOSTDC1Q6X4U4 206 aa3.7□□□□□ -1.82
HLA-DQA1-204ENST00000422863 HIST3H2BBQ8N257 126 aa3.7□□□□□ -1.82
HLA-DQA1-204ENST00000422863 TEX49A0A1B0GTD5 131 aa3.69□□□□□ -1.82
HLA-DQA1-204ENST00000422863 OR13C6PQ8NH95 151 aa3.69□□□□□ -1.82
HLA-DQA1-204ENST00000422863 YPEL4Q96NS1 127 aa3.69□□□□□ -1.82
HLA-DQA1-204ENST00000422863 DHRS4-AS1Q9P1J3 65 aa3.69□□□□□ -1.82
HLA-DQA1-204ENST00000422863 NDUFC2O95298 119 aa3.68□□□□□ -1.82
HLA-DQA1-204ENST00000422863 COX7BP24311 80 aa3.67□□□□□ -1.82
HLA-DQA1-204ENST00000422863 COA6Q5JTJ3 125 aaKnown RBP3.67□□□□□ -1.82
HLA-DQA1-204ENST00000422863 ADAMTSL4-AS1Q5T5F5 129 aa3.67□□□□□ -1.82
HLA-DQA1-204ENST00000422863 C18orf32Q8TCD1 76 aa3.67□□□□□ -1.82
HLA-DQA1-204ENST00000422863 SNHG12Q9BXW3 62 aa3.67□□□□□ -1.82
HLA-DQA1-204ENST00000422863 H0Y8G0 127 aa3.66□□□□□ -1.82
HLA-DQA1-204ENST00000422863 LEPROTO15243 131 aa3.66□□□□□ -1.82
HLA-DQA1-204ENST00000422863 HIST1H2BKO60814 126 aa3.66□□□□□ -1.82
HLA-DQA1-204ENST00000422863 HIST1H2BJP06899 126 aa3.66□□□□□ -1.82
HLA-DQA1-204ENST00000422863 HIST1H2BOP23527 126 aa3.66□□□□□ -1.82
HLA-DQA1-204ENST00000422863 HIST1H2BBP33778 126 aa3.66□□□□□ -1.82
HLA-DQA1-204ENST00000422863 HIST1H2BDP58876 126 aa3.66□□□□□ -1.82
HLA-DQA1-204ENST00000422863 HIST1H2BCP62807 126 aa3.66□□□□□ -1.82
HLA-DQA1-204ENST00000422863 HIST2H2BEQ16778 126 aa3.66□□□□□ -1.82
HLA-DQA1-204ENST00000422863 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.66□□□□□ -1.82
HLA-DQA1-204ENST00000422863 HIST1H2BHQ93079 126 aa3.66□□□□□ -1.82
HLA-DQA1-204ENST00000422863 HIST1H2BNQ99877 126 aa3.66□□□□□ -1.82
HLA-DQA1-204ENST00000422863 HIST1H2BMQ99879 126 aa3.66□□□□□ -1.82
HLA-DQA1-204ENST00000422863 TRAV12-1A0A0B4J245 112 aa3.65□□□□□ -1.83
HLA-DQA1-204ENST00000422863 KRTAP16-1A8MUX0 517 aa3.65□□□□□ -1.83
HLA-DQA1-204ENST00000422863 FABP4P15090 132 aa3.65□□□□□ -1.83
HLA-DQA1-204ENST00000422863 ELOF1P60002 83 aaKnown RBP3.65□□□□□ -1.83
HLA-DQA1-204ENST00000422863 C6orf99Q4VX62 202 aa3.65□□□□□ -1.83
HLA-DQA1-204ENST00000422863 COL5A1-AS1Q5SY13 56 aa3.65□□□□□ -1.83
HLA-DQA1-204ENST00000422863 IFI27L1Q96BM0 104 aa3.65□□□□□ -1.83
HLA-DQA1-204ENST00000422863 HIST1H2BLQ99880 126 aa3.65□□□□□ -1.83
HLA-DQA1-204ENST00000422863 J3QQQ9 107 aa3.64□□□□□ -1.83
HLA-DQA1-204ENST00000422863 IGFL1Q6UW32 110 aa3.64□□□□□ -1.83
HLA-DQA1-204ENST00000422863 PET117Q6UWS5 81 aa3.64□□□□□ -1.83
HLA-DQA1-204ENST00000422863 OBSCNQ5VST9 7968 aa3.63□□□□□ -1.83
HLA-DQA1-204ENST00000422863 A8MUU9 505 aa3.63□□□□□ -1.83
HLA-DQA1-204ENST00000422863 TRGC2P03986 189 aa3.62□□□□□ -1.83
HLA-DQA1-204ENST00000422863 HRES1P13985 223 aa3.62□□□□□ -1.83
HLA-DQA1-204ENST00000422863 UBE2V1Q13404 147 aa3.62□□□□□ -1.83
HLA-DQA1-204ENST00000422863 RBM12B-AS1Q9P1G2 102 aa3.62□□□□□ -1.83
HLA-DQA1-204ENST00000422863 TRAPPC1Q9Y5R8 145 aa3.62□□□□□ -1.83
HLA-DQA1-204ENST00000422863 IGLV5-48A0A075B6I7 105 aa3.61□□□□□ -1.83
HLA-DQA1-204ENST00000422863 A0A0J9YXY3 114 aa3.61□□□□□ -1.83
HLA-DQA1-204ENST00000422863 SCGB1A1P11684 91 aa3.61□□□□□ -1.83
HLA-DQA1-204ENST00000422863 VPS25Q9BRG1 176 aa3.61□□□□□ -1.83
HLA-DQA1-204ENST00000422863 TRBV7-7A0A0K0K1E9 115 aa3.6□□□□□ -1.83
HLA-DQA1-204ENST00000422863 K7ERU9 68 aa3.6□□□□□ -1.83
HLA-DQA1-204ENST00000422863 COX19Q49B96 90 aa3.6□□□□□ -1.83
HLA-DQA1-204ENST00000422863 MPLKIPQ8TAP9 179 aa3.6□□□□□ -1.83
HLA-DQA1-204ENST00000422863 LINC00308Q8TCZ7 52 aa3.6□□□□□ -1.83
HLA-DQA1-204ENST00000422863 SCGB1D1O95968 90 aa3.59□□□□□ -1.83
HLA-DQA1-204ENST00000422863 NMUP48645 174 aa3.59□□□□□ -1.83
HLA-DQA1-204ENST00000422863 DSCR10P59022 87 aa3.59□□□□□ -1.83
HLA-DQA1-204ENST00000422863 Q6ZVH6 145 aa3.59□□□□□ -1.83
HLA-DQA1-204ENST00000422863 PMCHL2Q9BQD1 86 aa3.59□□□□□ -1.83
HLA-DQA1-204ENST00000422863 SPANXCQ9NY87 97 aa3.59□□□□□ -1.83
HLA-DQA1-204ENST00000422863 F8WEM9 126 aa3.58□□□□□ -1.84
HLA-DQA1-204ENST00000422863 LST1O00453 97 aa3.58□□□□□ -1.84
HLA-DQA1-204ENST00000422863 VAMP8Q9BV40 100 aa3.58□□□□□ -1.84
HLA-DQA1-204ENST00000422863 SPANXDQ9BXN6 97 aa3.58□□□□□ -1.84
HLA-DQA1-204ENST00000422863 UQCR10Q9UDW1 63 aa3.58□□□□□ -1.84
HLA-DQA1-204ENST00000422863 HERVK_113P61574 105 aa3.57□□□□□ -1.84
HLA-DQA1-204ENST00000422863 BATFQ16520 125 aa3.57□□□□□ -1.84
HLA-DQA1-204ENST00000422863 OCIAD2Q56VL3 154 aa3.57□□□□□ -1.84
HLA-DQA1-204ENST00000422863 NOTCH2NLQ7Z3S9 236 aa3.57□□□□□ -1.84
HLA-DQA1-204ENST00000422863 MTURNQ8N3F0 131 aa3.57□□□□□ -1.84
HLA-DQA1-204ENST00000422863 A0A1B0GV72 72 aa3.56□□□□□ -1.84
HLA-DQA1-204ENST00000422863 A0A1B0GWB2 263 aa3.56□□□□□ -1.84
HLA-DQA1-204ENST00000422863 SERF1AO75920 110 aa3.56□□□□□ -1.84
HLA-DQA1-204ENST00000422863 KRTAP2-3P0C7H8 128 aa3.56□□□□□ -1.84
HLA-DQA1-204ENST00000422863 LITAFQ99732 161 aa3.56□□□□□ -1.84
HLA-DQA1-204ENST00000422863 KRTAP2-4Q9BYR9 128 aa3.56□□□□□ -1.84
HLA-DQA1-204ENST00000422863 TRBV7-6A0A0J9YX20 115 aa3.55□□□□□ -1.84
HLA-DQA1-204ENST00000422863 DPM2O94777 84 aa3.55□□□□□ -1.84
HLA-DQA1-204ENST00000422863 CLEC2BQ92478 149 aa3.55□□□□□ -1.84
HLA-DQA1-204ENST00000422863 CHCHD1Q96BP2 118 aaKnown RBP3.55□□□□□ -1.84
HLA-DQA1-204ENST00000422863 MDN1Q9NU22 5596 aa3.54□□□□□ -1.84
HLA-DQA1-204ENST00000422863 A6NDN8 102 aa3.53□□□□□ -1.84
HLA-DQA1-204ENST00000422863 A6NN06 94 aa3.53□□□□□ -1.84
HLA-DQA1-204ENST00000422863 A8MWP4 228 aa3.53□□□□□ -1.84
HLA-DQA1-204ENST00000422863 HSBP1O75506 76 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms