RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 CLEC2BQ92478 149 aa6.17□□□□□ -1.42
SQSTM1-203ENST00000422245 FSIP2Q5CZC0 6907 aa6.16□□□□□ -1.42
SQSTM1-203ENST00000422245 hADV29S1A0JD25 119 aa6.16□□□□□ -1.42
SQSTM1-203ENST00000422245 S100A2P29034 98 aa6.15□□□□□ -1.42
SQSTM1-203ENST00000422245 HIST3H2BBQ8N257 126 aa6.15□□□□□ -1.42
SQSTM1-203ENST00000422245 HIST1H2BLQ99880 126 aa6.15□□□□□ -1.42
SQSTM1-203ENST00000422245 TRBV7-7A0A0K0K1E9 115 aa6.14□□□□□ -1.43
SQSTM1-203ENST00000422245 CRCT1Q9UGL9 99 aa6.14□□□□□ -1.43
SQSTM1-203ENST00000422245 IGFL1Q6UW32 110 aa6.13□□□□□ -1.43
SQSTM1-203ENST00000422245 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.13□□□□□ -1.43
SQSTM1-203ENST00000422245 COX6B2Q6YFQ2 88 aa6.13□□□□□ -1.43
SQSTM1-203ENST00000422245 PPDPFLQ8WWR9 84 aa6.13□□□□□ -1.43
SQSTM1-203ENST00000422245 OCIAD2Q56VL3 154 aa6.12□□□□□ -1.43
SQSTM1-203ENST00000422245 BVES-AS1Q5T3Y7 98 aa6.12□□□□□ -1.43
SQSTM1-203ENST00000422245 LORP23490 312 aaPredicted RBP6.11□□□□□ -1.43
SQSTM1-203ENST00000422245 KRTAP10-6P60371 365 aaPredicted RBP6.11□□□□□ -1.43
SQSTM1-203ENST00000422245 M0R2T5 61 aa6.1□□□□□ -1.43
SQSTM1-203ENST00000422245 SCGB1D1O95968 90 aa6.1□□□□□ -1.43
SQSTM1-203ENST00000422245 HIST1H4GQ99525 98 aa6.09□□□□□ -1.43
SQSTM1-203ENST00000422245 C12orf57Q99622 126 aa6.09□□□□□ -1.43
SQSTM1-203ENST00000422245 S100A6P06703 90 aa6.08□□□□□ -1.44
SQSTM1-203ENST00000422245 Q75L30 129 aa6.08□□□□□ -1.44
SQSTM1-203ENST00000422245 OBSCN-AS1Q96MR7 158 aa6.08□□□□□ -1.44
SQSTM1-203ENST00000422245 SNHG12Q9BXW3 62 aa6.08□□□□□ -1.44
SQSTM1-203ENST00000422245 H3BUT2 72 aa6.06□□□□□ -1.44
SQSTM1-203ENST00000422245 LST1O00453 97 aa6.06□□□□□ -1.44
SQSTM1-203ENST00000422245 COX8AP10176 69 aa6.06□□□□□ -1.44
SQSTM1-203ENST00000422245 ATP11AUNQ6ZP68 121 aa6.06□□□□□ -1.44
SQSTM1-203ENST00000422245 SS18L2Q9UHA2 77 aa6.06□□□□□ -1.44
SQSTM1-203ENST00000422245 DLEU1O43261 78 aa6.05□□□□□ -1.44
SQSTM1-203ENST00000422245 SNCGO76070 127 aa6.05□□□□□ -1.44
SQSTM1-203ENST00000422245 Q6Q795 121 aa6.04□□□□□ -1.44
SQSTM1-203ENST00000422245 RAB37Q96AX2 223 aa6.03□□□□□ -1.44
SQSTM1-203ENST00000422245 FLGP20930 4061 aaPredicted RBP6.03□□□□□ -1.44
SQSTM1-203ENST00000422245 A0A0B4J2C4 111 aa6.02□□□□□ -1.45
SQSTM1-203ENST00000422245 H0YGX0 51 aa6.02□□□□□ -1.45
SQSTM1-203ENST00000422245 CFC1P0CG37 223 aa6.01□□□□□ -1.45
SQSTM1-203ENST00000422245 S100A1P23297 94 aa6.01□□□□□ -1.45
SQSTM1-203ENST00000422245 TEN1Q86WV5 123 aa6.01□□□□□ -1.45
SQSTM1-203ENST00000422245 Q96NJ1 140 aa6.01□□□□□ -1.45
SQSTM1-203ENST00000422245 HIGD1BQ9P298 99 aa6.01□□□□□ -1.45
SQSTM1-203ENST00000422245 GHRHP01286 108 aa6□□□□□ -1.45
SQSTM1-203ENST00000422245 NDUFV3P56181 108 aaKnown RBP5.99□□□□□ -1.45
SQSTM1-203ENST00000422245 FAM218AQ96MZ4 157 aa5.99□□□□□ -1.45
SQSTM1-203ENST00000422245 C20orf166-AS1Q96NR2 134 aa5.99□□□□□ -1.45
SQSTM1-203ENST00000422245 A0A087WSZ3 146 aa5.98□□□□□ -1.45
SQSTM1-203ENST00000422245 A0A1B0GX51 115 aa5.98□□□□□ -1.45
SQSTM1-203ENST00000422245 C14orf144Q96I85 54 aa5.98□□□□□ -1.45
SQSTM1-203ENST00000422245 A8MUU9 505 aa5.96□□□□□ -1.46
SQSTM1-203ENST00000422245 H3BMG7 143 aa5.96□□□□□ -1.46
SQSTM1-203ENST00000422245 SPATA45Q537H7 98 aa5.96□□□□□ -1.46
SQSTM1-203ENST00000422245 PAM16Q9Y3D7 125 aa5.96□□□□□ -1.46
SQSTM1-203ENST00000422245 TMEM238LA0A1B0GVL6 79 aa5.95□□□□□ -1.46
SQSTM1-203ENST00000422245 A6NJY4 79 aa5.95□□□□□ -1.46
SQSTM1-203ENST00000422245 C2orf91Q6ZV80 131 aa5.95□□□□□ -1.46
SQSTM1-203ENST00000422245 VAMP8Q9BV40 100 aa5.95□□□□□ -1.46
SQSTM1-203ENST00000422245 FABP2P12104 132 aa5.94□□□□□ -1.46
SQSTM1-203ENST00000422245 PRO1854Q9UHT4 67 aa5.94□□□□□ -1.46
SQSTM1-203ENST00000422245 TRBV20-1A0A075B6N2 111 aa5.93□□□□□ -1.46
SQSTM1-203ENST00000422245 CEND1Q8N111 149 aa5.93□□□□□ -1.46
SQSTM1-203ENST00000422245 SIGMAR1Q99720 223 aa5.93□□□□□ -1.46
SQSTM1-203ENST00000422245 A0A1W2PNM2 257 aa5.91□□□□□ -1.46
SQSTM1-203ENST00000422245 TRIAP1O43715 76 aa5.91□□□□□ -1.46
SQSTM1-203ENST00000422245 DSCR10P59022 87 aa5.91□□□□□ -1.46
SQSTM1-203ENST00000422245 DNAL4O96015 105 aa5.9□□□□□ -1.46
SQSTM1-203ENST00000422245 FXYD2P54710 66 aa5.9□□□□□ -1.46
SQSTM1-203ENST00000422245 TRBV7-4A0A0J9YYF1 115 aa5.89□□□□□ -1.47
SQSTM1-203ENST00000422245 H3BQ85 93 aa5.89□□□□□ -1.47
SQSTM1-203ENST00000422245 ANKRD29Q8N6D5 301 aa5.88□□□□□ -1.47
SQSTM1-203ENST00000422245 ORMDL1Q9P0S3 153 aa5.88□□□□□ -1.47
SQSTM1-203ENST00000422245 IGKV4-1P06312 121 aa5.87□□□□□ -1.47
SQSTM1-203ENST00000422245 LINC00313P59037 77 aa5.87□□□□□ -1.47
SQSTM1-203ENST00000422245 KRTAP16-1A8MUX0 517 aa5.85□□□□□ -1.47
SQSTM1-203ENST00000422245 TMEM256-PLSCR3K7ERE1 68 aa5.85□□□□□ -1.47
SQSTM1-203ENST00000422245 HSD52Q0P140 79 aa5.85□□□□□ -1.47
SQSTM1-203ENST00000422245 A0A1B0GV72 72 aa5.84□□□□□ -1.47
SQSTM1-203ENST00000422245 TRACP01848 142 aa5.84□□□□□ -1.47
SQSTM1-203ENST00000422245 COX6CP09669 75 aa5.84□□□□□ -1.47
SQSTM1-203ENST00000422245 PSMB2P49721 201 aa5.84□□□□□ -1.47
SQSTM1-203ENST00000422245 KRTAP9-8Q9BYQ0 159 aa5.84□□□□□ -1.47
SQSTM1-203ENST00000422245 FAM236DA0A1B0GTK5 79 aa5.83□□□□□ -1.48
SQSTM1-203ENST00000422245 K7ERJ3 54 aa5.83□□□□□ -1.48
SQSTM1-203ENST00000422245 CCKP06307 115 aa5.83□□□□□ -1.48
SQSTM1-203ENST00000422245 FAM236CP0DP71 79 aa5.83□□□□□ -1.48
SQSTM1-203ENST00000422245 LINC00472Q9H8W2 130 aa5.82□□□□□ -1.48
SQSTM1-203ENST00000422245 USH2AO75445 5202 aa5.81□□□□□ -1.48
SQSTM1-203ENST00000422245 UBE2V1Q13404 147 aa5.81□□□□□ -1.48
SQSTM1-203ENST00000422245 RBM12B-AS1Q9P1G2 102 aa5.81□□□□□ -1.48
SQSTM1-203ENST00000422245 IGHV6-1A0A0B4J1U7 121 aa5.8□□□□□ -1.48
SQSTM1-203ENST00000422245 NOTCH2NLQ7Z3S9 236 aa5.8□□□□□ -1.48
SQSTM1-203ENST00000422245 SSPOA2VEC9 5147 aa5.8□□□□□ -1.48
SQSTM1-203ENST00000422245 C8orf87E5RJ46 101 aa5.79□□□□□ -1.48
SQSTM1-203ENST00000422245 HRES1P13985 223 aa5.79□□□□□ -1.48
SQSTM1-203ENST00000422245 DEFB116Q30KQ4 102 aa5.79□□□□□ -1.48
SQSTM1-203ENST00000422245 MPLKIPQ8TAP9 179 aa5.79□□□□□ -1.48
SQSTM1-203ENST00000422245 PYY3Q5JQD4 70 aa5.78□□□□□ -1.48
SQSTM1-203ENST00000422245 A0A1B0GVX0 72 aa5.76□□□□□ -1.49
SQSTM1-203ENST00000422245 MT2AP02795 61 aa5.76□□□□□ -1.49
SQSTM1-203ENST00000422245 C21orf62-AS1Q17RA5 79 aa5.76□□□□□ -1.49
SQSTM1-203ENST00000422245 VPS25Q9BRG1 176 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms