RNA–Protein interactions for RNA: ENST00000421386.1

SCG2-202, Transcript of secretogranin II, humanhuman

TSL 3

Gene SCG2, Length 589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-202ENST00000421386 SSBP3-AS1Q7Z2R9 100 aa2.95□□□□□ -1.94
SCG2-202ENST00000421386 PSORS1C2Q9UIG4 136 aa2.95□□□□□ -1.94
SCG2-202ENST00000421386 NCOR1O75376 2440 aa2.95□□□□□ -1.94
SCG2-202ENST00000421386 C2CD3Q4AC94 2353 aa2.94□□□□□ -1.94
SCG2-202ENST00000421386 COX6B2Q6YFQ2 88 aa2.94□□□□□ -1.94
SCG2-202ENST00000421386 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.94□□□□□ -1.94
SCG2-202ENST00000421386 ANKHD1Q8IWZ3 2542 aaKnown RBP2.94□□□□□ -1.94
SCG2-202ENST00000421386 CACNA1HO95180 2353 aa2.94□□□□□ -1.94
SCG2-202ENST00000421386 FRYLO94915 3013 aa2.93□□□□□ -1.94
SCG2-202ENST00000421386 C5orf42Q9H799 3197 aa2.93□□□□□ -1.94
SCG2-202ENST00000421386 NBDYA0A0U1RRE5 68 aa2.93□□□□□ -1.94
SCG2-202ENST00000421386 A0A1B0GU33 70 aa2.93□□□□□ -1.94
SCG2-202ENST00000421386 PRLHP81277 87 aa2.93□□□□□ -1.94
SCG2-202ENST00000421386 LCE1FQ5T754 118 aa2.93□□□□□ -1.94
SCG2-202ENST00000421386 TRIOO75962 3097 aa2.92□□□□□ -1.94
SCG2-202ENST00000421386 ACACAQ13085 2346 aa2.92□□□□□ -1.94
SCG2-202ENST00000421386 NOTCH3Q9UM47 2321 aa2.92□□□□□ -1.94
SCG2-202ENST00000421386 KALRNO60229 2985 aa2.92□□□□□ -1.94
SCG2-202ENST00000421386 K7EIL1 84 aa2.92□□□□□ -1.94
SCG2-202ENST00000421386 H1FX-AS1Q4G0G2 97 aa2.92□□□□□ -1.94
SCG2-202ENST00000421386 ABCA2Q9BZC7 2435 aa2.92□□□□□ -1.94
SCG2-202ENST00000421386 ALMS1Q8TCU4 4167 aa2.91□□□□□ -1.94
SCG2-202ENST00000421386 KRTAP10-12P60413 245 aa2.91□□□□□ -1.94
SCG2-202ENST00000421386 CAMK2N1Q7Z7J9 78 aa2.91□□□□□ -1.94
SCG2-202ENST00000421386 WDFY4Q6ZS81 3184 aa2.89□□□□□ -1.95
SCG2-202ENST00000421386 KRTAP13-1Q8IUC0 172 aa2.89□□□□□ -1.95
SCG2-202ENST00000421386 DEFB124Q8NES8 71 aa2.89□□□□□ -1.95
SCG2-202ENST00000421386 CIRBP-AS1Q8TBR5 109 aa2.89□□□□□ -1.95
SCG2-202ENST00000421386 PIEZO2Q9H5I5 2752 aa2.89□□□□□ -1.95
SCG2-202ENST00000421386 CREBBPQ92793 2442 aa2.89□□□□□ -1.95
SCG2-202ENST00000421386 TRIOBPQ9H2D6 2365 aa2.88□□□□□ -1.95
SCG2-202ENST00000421386 ANKRD17O75179 2603 aaKnown RBP2.88□□□□□ -1.95
SCG2-202ENST00000421386 TPRXLQ17RH7 258 aa2.88□□□□□ -1.95
SCG2-202ENST00000421386 KRTAP24-1Q3LI83 254 aa2.88□□□□□ -1.95
SCG2-202ENST00000421386 LAMA2P24043 3122 aaKnown RBP2.88□□□□□ -1.95
SCG2-202ENST00000421386 AKAP13Q12802 2813 aa2.87□□□□□ -1.95
SCG2-202ENST00000421386 USP34Q70CQ2 3546 aa2.86□□□□□ -1.95
SCG2-202ENST00000421386 DSPP15924 2871 aaKnown RBP2.86□□□□□ -1.95
SCG2-202ENST00000421386 FREM2Q5SZK8 3169 aa2.86□□□□□ -1.95
SCG2-202ENST00000421386 PRUNE2Q8WUY3 3088 aa2.86□□□□□ -1.95
SCG2-202ENST00000421386 LAMA3Q16787 3333 aa2.86□□□□□ -1.95
SCG2-202ENST00000421386 BRCA2P51587 3418 aa2.85□□□□□ -1.95
SCG2-202ENST00000421386 HTN3P15516 51 aa2.85□□□□□ -1.95
SCG2-202ENST00000421386 RPL37P61927 97 aaKnown RBP2.85□□□□□ -1.95
SCG2-202ENST00000421386 CRIPTQ9P021 101 aa2.85□□□□□ -1.95
SCG2-202ENST00000421386 SPTA1P02549 2419 aa2.84□□□□□ -1.95
SCG2-202ENST00000421386 DEFB135Q30KP9 77 aa2.84□□□□□ -1.95
SCG2-202ENST00000421386 DCHS1Q96JQ0 3298 aa2.84□□□□□ -1.96
SCG2-202ENST00000421386 SPTBN5Q9NRC6 3674 aaKnown RBP2.84□□□□□ -1.96
SCG2-202ENST00000421386 LAMA1P25391 3075 aa2.84□□□□□ -1.96
SCG2-202ENST00000421386 ZDBF2Q9HCK1 2354 aa2.83□□□□□ -1.96
SCG2-202ENST00000421386 A0A096LNI7 61 aa2.83□□□□□ -1.96
SCG2-202ENST00000421386 CHD6Q8TD26 2715 aa2.83□□□□□ -1.96
SCG2-202ENST00000421386 CEP290O15078 2479 aa2.82□□□□□ -1.96
SCG2-202ENST00000421386 SPTAN1Q13813 2472 aaKnown RBP2.82□□□□□ -1.96
SCG2-202ENST00000421386 MAP1AP78559 2803 aaPredicted RBP2.82□□□□□ -1.96
SCG2-202ENST00000421386 DEFB4AO15263 64 aa2.81□□□□□ -1.96
SCG2-202ENST00000421386 C14orf177Q52M58 125 aa2.81□□□□□ -1.96
SCG2-202ENST00000421386 IGF2RP11717 2491 aa2.81□□□□□ -1.96
SCG2-202ENST00000421386 VCANP13611 3396 aa2.8□□□□□ -1.96
SCG2-202ENST00000421386 NBASA2RRP1 2371 aa2.8□□□□□ -1.96
SCG2-202ENST00000421386 TYMSOSQ8TAI1 123 aa2.8□□□□□ -1.96
SCG2-202ENST00000421386 DMXL2Q8TDJ6 3036 aa2.8□□□□□ -1.96
SCG2-202ENST00000421386 TENM2Q9NT68 2774 aa2.8□□□□□ -1.96
SCG2-202ENST00000421386 SPTBN4Q9H254 2564 aa2.8□□□□□ -1.96
SCG2-202ENST00000421386 SPG11Q96JI7 2443 aa2.8□□□□□ -1.96
SCG2-202ENST00000421386 REV3LO60673 3130 aa2.79□□□□□ -1.96
SCG2-202ENST00000421386 ITPR1Q14643 2758 aa2.79□□□□□ -1.96
SCG2-202ENST00000421386 NCOR2Q9Y618 2525 aa2.78□□□□□ -1.96
SCG2-202ENST00000421386 SPINK1P00995 79 aa2.78□□□□□ -1.96
SCG2-202ENST00000421386 DMDP11532 3685 aa2.78□□□□□ -1.96
SCG2-202ENST00000421386 WDFY3Q8IZQ1 3526 aa2.78□□□□□ -1.96
SCG2-202ENST00000421386 TACC2O95359 2948 aa2.78□□□□□ -1.96
SCG2-202ENST00000421386 CDH23Q9H251 3354 aa2.78□□□□□ -1.96
SCG2-202ENST00000421386 LCE3CQ5T5A8 94 aa2.77□□□□□ -1.97
SCG2-202ENST00000421386 GVINP1Q7Z2Y8 2422 aa2.77□□□□□ -1.97
SCG2-202ENST00000421386 OBSCNQ5VST9 7968 aa2.76□□□□□ -1.97
SCG2-202ENST00000421386 SPINK6Q6UWN8 80 aa2.76□□□□□ -1.97
SCG2-202ENST00000421386 CSPG4Q6UVK1 2322 aa2.74□□□□□ -1.97
SCG2-202ENST00000421386 CELSR2Q9HCU4 2923 aa2.74□□□□□ -1.97
SCG2-202ENST00000421386 PLAC4Q8WY50 150 aa2.74□□□□□ -1.97
SCG2-202ENST00000421386 SPEGQ15772 3267 aa2.74□□□□□ -1.97
SCG2-202ENST00000421386 BOD1L1Q8NFC6 3051 aa2.74□□□□□ -1.97
SCG2-202ENST00000421386 HRNRQ86YZ3 2850 aaPredicted RBP2.74□□□□□ -1.97
SCG2-202ENST00000421386 PRRC2CQ9Y520 2896 aaKnown RBP2.73□□□□□ -1.97
SCG2-202ENST00000421386 C10orf95Q9H7T3 257 aa2.73□□□□□ -1.97
SCG2-202ENST00000421386 PRO2289Q9P1D8 64 aa2.72□□□□□ -1.97
SCG2-202ENST00000421386 ZFHX4Q86UP3 3567 aa2.71□□□□□ -1.97
SCG2-202ENST00000421386 CSMD1Q96PZ7 3565 aa2.71□□□□□ -1.97
SCG2-202ENST00000421386 KRTAP10-3P60369 221 aa2.71□□□□□ -1.98
SCG2-202ENST00000421386 KRTAP4-3Q9BYR4 195 aa2.71□□□□□ -1.98
SCG2-202ENST00000421386 OTOGQ6ZRI0 2925 aa2.71□□□□□ -1.98
SCG2-202ENST00000421386 TLN1Q9Y490 2541 aaKnown RBP2.71□□□□□ -1.98
SCG2-202ENST00000421386 DCHS2Q6V1P9 2916 aa2.7□□□□□ -1.98
SCG2-202ENST00000421386 TLN2Q9Y4G6 2542 aa2.7□□□□□ -1.98
SCG2-202ENST00000421386 ASH1LQ9NR48 2969 aaKnown RBP2.7□□□□□ -1.98
SCG2-202ENST00000421386 RIF1Q5UIP0 2472 aaKnown RBP2.7□□□□□ -1.98
SCG2-202ENST00000421386 FLG2Q5D862 2391 aaPredicted RBP2.69□□□□□ -1.98
SCG2-202ENST00000421386 CELSR3Q9NYQ7 3312 aa2.69□□□□□ -1.98
SCG2-202ENST00000421386 S4R3F8 94 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms