RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 A4D1N5 150 aa8.81□□□□□ -1
UPF3AP3-201ENST00000420996 A6NDN8 102 aa8.8□□□□□ -1
UPF3AP3-201ENST00000420996 COPS9Q8WXC6 57 aa8.8□□□□□ -1
UPF3AP3-201ENST00000420996 HIST1H2BLQ99880 126 aa8.8□□□□□ -1
UPF3AP3-201ENST00000420996 NHP2Q9NX24 153 aaKnown RBP8.79□□□□□ -1
UPF3AP3-201ENST00000420996 IFITM1P13164 125 aa8.78□□□□□ -1
UPF3AP3-201ENST00000420996 Q6Q795 121 aa8.78□□□□□ -1
UPF3AP3-201ENST00000420996 SCGB1D4Q6XE38 83 aa8.78□□□□□ -1
UPF3AP3-201ENST00000420996 PCP2Q8IVA1 136 aa8.77□□□□□ -1.01
UPF3AP3-201ENST00000420996 C20orf202A1L168 122 aa8.76□□□□□ -1.01
UPF3AP3-201ENST00000420996 ATP11AUNQ6ZP68 121 aa8.76□□□□□ -1.01
UPF3AP3-201ENST00000420996 KRTAP9-7A8MTY7 169 aa8.75□□□□□ -1.01
UPF3AP3-201ENST00000420996 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.75□□□□□ -1.01
UPF3AP3-201ENST00000420996 F8WEM9 126 aa8.75□□□□□ -1.01
UPF3AP3-201ENST00000420996 Q6ZVH6 145 aa8.75□□□□□ -1.01
UPF3AP3-201ENST00000420996 Q75L30 129 aa8.75□□□□□ -1.01
UPF3AP3-201ENST00000420996 LCE2BO14633 110 aa8.74□□□□□ -1.01
UPF3AP3-201ENST00000420996 SMIM11BQ8TCY0 68 aa8.74□□□□□ -1.01
UPF3AP3-201ENST00000420996 MUSTN1Q8IVN3 82 aa8.73□□□□□ -1.01
UPF3AP3-201ENST00000420996 TRAV13-2A0A0B4J235 113 aa8.72□□□□□ -1.01
UPF3AP3-201ENST00000420996 CFC1P0CG37 223 aa8.72□□□□□ -1.01
UPF3AP3-201ENST00000420996 OBSCN-AS1Q96MR7 158 aa8.72□□□□□ -1.01
UPF3AP3-201ENST00000420996 TRBV7-7A0A0K0K1E9 115 aa8.71□□□□□ -1.02
UPF3AP3-201ENST00000420996 PCP4L1A6NKN8 68 aa8.71□□□□□ -1.02
UPF3AP3-201ENST00000420996 Q6JHZ5 121 aa8.71□□□□□ -1.02
UPF3AP3-201ENST00000420996 CLEC2BQ92478 149 aa8.69□□□□□ -1.02
UPF3AP3-201ENST00000420996 KRTAP9-8Q9BYQ0 159 aa8.69□□□□□ -1.02
UPF3AP3-201ENST00000420996 TSTD3H0UI37 97 aa8.68□□□□□ -1.02
UPF3AP3-201ENST00000420996 VAMP3Q15836 100 aa8.68□□□□□ -1.02
UPF3AP3-201ENST00000420996 IGFL1Q6UW32 110 aa8.68□□□□□ -1.02
UPF3AP3-201ENST00000420996 LINC00575Q6W349 94 aa8.68□□□□□ -1.02
UPF3AP3-201ENST00000420996 SCGB1D1O95968 90 aa8.67□□□□□ -1.02
UPF3AP3-201ENST00000420996 OCIAD2Q56VL3 154 aa8.66□□□□□ -1.02
UPF3AP3-201ENST00000420996 PYY3Q5JQD4 70 aa8.66□□□□□ -1.02
UPF3AP3-201ENST00000420996 Q6ZQY7 126 aa8.66□□□□□ -1.02
UPF3AP3-201ENST00000420996 hADV29S1A0JD25 119 aa8.64□□□□□ -1.03
UPF3AP3-201ENST00000420996 Q96NJ1 140 aa8.63□□□□□ -1.03
UPF3AP3-201ENST00000420996 SSPOA2VEC9 5147 aa8.63□□□□□ -1.03
UPF3AP3-201ENST00000420996 USH2AO75445 5202 aa8.62□□□□□ -1.03
UPF3AP3-201ENST00000420996 LST1O00453 97 aa8.61□□□□□ -1.03
UPF3AP3-201ENST00000420996 C20orf166-AS1Q96NR2 134 aa8.59□□□□□ -1.03
UPF3AP3-201ENST00000420996 TRBV20-1A0A075B6N2 111 aa8.58□□□□□ -1.04
UPF3AP3-201ENST00000420996 HSBP1L1C9JCN9 74 aa8.58□□□□□ -1.04
UPF3AP3-201ENST00000420996 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.58□□□□□ -1.04
UPF3AP3-201ENST00000420996 A8MUU9 505 aa8.57□□□□□ -1.04
UPF3AP3-201ENST00000420996 PPDPFLQ8WWR9 84 aa8.57□□□□□ -1.04
UPF3AP3-201ENST00000420996 VAMP8Q9BV40 100 aa8.57□□□□□ -1.04
UPF3AP3-201ENST00000420996 SNHG12Q9BXW3 62 aa8.55□□□□□ -1.04
UPF3AP3-201ENST00000420996 H3BUT2 72 aa8.53□□□□□ -1.04
UPF3AP3-201ENST00000420996 GHRHP01286 108 aa8.53□□□□□ -1.04
UPF3AP3-201ENST00000420996 COX8AP10176 69 aa8.53□□□□□ -1.04
UPF3AP3-201ENST00000420996 SS18L2Q9UHA2 77 aa8.53□□□□□ -1.04
UPF3AP3-201ENST00000420996 MT2AP02795 61 aa8.51□□□□□ -1.05
UPF3AP3-201ENST00000420996 C14orf144Q96I85 54 aa8.51□□□□□ -1.05
UPF3AP3-201ENST00000420996 TMEM238LA0A1B0GVL6 79 aa8.5□□□□□ -1.05
UPF3AP3-201ENST00000420996 BVES-AS1Q5T3Y7 98 aa8.5□□□□□ -1.05
UPF3AP3-201ENST00000420996 PAM16Q9Y3D7 125 aa8.5□□□□□ -1.05
UPF3AP3-201ENST00000420996 SPATA45Q537H7 98 aa8.49□□□□□ -1.05
UPF3AP3-201ENST00000420996 DLEU1O43261 78 aa8.48□□□□□ -1.05
UPF3AP3-201ENST00000420996 C2orf91Q6ZV80 131 aa8.48□□□□□ -1.05
UPF3AP3-201ENST00000420996 TEN1Q86WV5 123 aa8.48□□□□□ -1.05
UPF3AP3-201ENST00000420996 FCGBPQ9Y6R7 5405 aaPredicted RBP8.48□□□□□ -1.05
UPF3AP3-201ENST00000420996 HIST1H4GQ99525 98 aa8.47□□□□□ -1.05
UPF3AP3-201ENST00000420996 KRTAP19-1Q8IUB9 90 aa8.46□□□□□ -1.06
UPF3AP3-201ENST00000420996 UQCR10Q9UDW1 63 aa8.46□□□□□ -1.06
UPF3AP3-201ENST00000420996 FAM236DA0A1B0GTK5 79 aa8.44□□□□□ -1.06
UPF3AP3-201ENST00000420996 MT1FP04733 61 aa8.44□□□□□ -1.06
UPF3AP3-201ENST00000420996 FAM236CP0DP71 79 aa8.44□□□□□ -1.06
UPF3AP3-201ENST00000420996 A0A087WSZ3 146 aa8.43□□□□□ -1.06
UPF3AP3-201ENST00000420996 M0R143 59 aa8.43□□□□□ -1.06
UPF3AP3-201ENST00000420996 DSCR10P59022 87 aa8.43□□□□□ -1.06
UPF3AP3-201ENST00000420996 KRTAP16-1A8MUX0 517 aa8.42□□□□□ -1.06
UPF3AP3-201ENST00000420996 KRTAP9-3Q9BYQ3 159 aa8.42□□□□□ -1.06
UPF3AP3-201ENST00000420996 HIGD1BQ9P298 99 aa8.42□□□□□ -1.06
UPF3AP3-201ENST00000420996 SNCGO76070 127 aa8.4□□□□□ -1.06
UPF3AP3-201ENST00000420996 NDUFV3P56181 108 aaKnown RBP8.4□□□□□ -1.06
UPF3AP3-201ENST00000420996 KRTAP10-10P60014 251 aa8.4□□□□□ -1.06
UPF3AP3-201ENST00000420996 MPLKIPQ8TAP9 179 aa8.39□□□□□ -1.07
UPF3AP3-201ENST00000420996 RBM12B-AS1Q9P1G2 102 aa8.39□□□□□ -1.07
UPF3AP3-201ENST00000420996 LINC00313P59037 77 aa8.37□□□□□ -1.07
UPF3AP3-201ENST00000420996 HRES1P13985 223 aa8.36□□□□□ -1.07
UPF3AP3-201ENST00000420996 SIGMAR1Q99720 223 aa8.36□□□□□ -1.07
UPF3AP3-201ENST00000420996 H0YGX0 51 aa8.35□□□□□ -1.07
UPF3AP3-201ENST00000420996 H3BMG7 143 aa8.35□□□□□ -1.07
UPF3AP3-201ENST00000420996 FXYD2P54710 66 aa8.35□□□□□ -1.07
UPF3AP3-201ENST00000420996 CEND1Q8N111 149 aa8.35□□□□□ -1.07
UPF3AP3-201ENST00000420996 A0A0B4J2C4 111 aa8.34□□□□□ -1.07
UPF3AP3-201ENST00000420996 FAM218AQ96MZ4 157 aa8.33□□□□□ -1.08
UPF3AP3-201ENST00000420996 A0A1W2PNM2 257 aa8.32□□□□□ -1.08
UPF3AP3-201ENST00000420996 COL5A1-AS1Q5SY13 56 aa8.32□□□□□ -1.08
UPF3AP3-201ENST00000420996 RAB37Q96AX2 223 aa8.32□□□□□ -1.08
UPF3AP3-201ENST00000420996 BATFQ16520 125 aa8.31□□□□□ -1.08
UPF3AP3-201ENST00000420996 NOTCH2NLQ7Z3S9 236 aa8.31□□□□□ -1.08
UPF3AP3-201ENST00000420996 IGKV4-1P06312 121 aa8.3□□□□□ -1.08
UPF3AP3-201ENST00000420996 FABP2P12104 132 aa8.29□□□□□ -1.08
UPF3AP3-201ENST00000420996 LINC00846Q9NV44 126 aa8.28□□□□□ -1.08
UPF3AP3-201ENST00000420996 A0A1B0GX51 115 aa8.27□□□□□ -1.09
UPF3AP3-201ENST00000420996 SYNE2Q8WXH0 6885 aaKnown RBP8.26□□□□□ -1.09
UPF3AP3-201ENST00000420996 K7ERJ3 54 aa8.26□□□□□ -1.09
UPF3AP3-201ENST00000420996 PRO1854Q9UHT4 67 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms