RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 H0Y9P7 68 aa5.13□□□□□ -1.59
HMGXB4-202ENST00000418170 RPL37AP8A6NKH3 93 aa5.12□□□□□ -1.59
HMGXB4-202ENST00000418170 DYNC2H1Q8NCM8 4307 aaKnown RBP5.12□□□□□ -1.59
HMGXB4-202ENST00000418170 COL7A1Q02388 2944 aa5.12□□□□□ -1.59
HMGXB4-202ENST00000418170 IGLV1-50A0A075B6I6 118 aa5.12□□□□□ -1.59
HMGXB4-202ENST00000418170 A6NED7 52 aa5.12□□□□□ -1.59
HMGXB4-202ENST00000418170 PLA2G2DQ9UNK4 145 aa5.12□□□□□ -1.59
HMGXB4-202ENST00000418170 LINC00476Q8WZB0 136 aa5.12□□□□□ -1.59
HMGXB4-202ENST00000418170 HUWE1Q7Z6Z7 4374 aaKnown RBP5.12□□□□□ -1.59
HMGXB4-202ENST00000418170 C9orf163Q8N9P6 203 aa5.12□□□□□ -1.59
HMGXB4-202ENST00000418170 APOC4P55056 127 aa5.11□□□□□ -1.59
HMGXB4-202ENST00000418170 HIVEP2P31629 2446 aa5.11□□□□□ -1.59
HMGXB4-202ENST00000418170 IGLV5-37A0A075B6J1 123 aa5.1□□□□□ -1.59
HMGXB4-202ENST00000418170 CDC42SE1Q9NRR8 79 aa5.1□□□□□ -1.59
HMGXB4-202ENST00000418170 DNAH9Q9NYC9 4486 aa5.1□□□□□ -1.59
HMGXB4-202ENST00000418170 IGFL1Q6UW32 110 aa5.1□□□□□ -1.59
HMGXB4-202ENST00000418170 TLX1NBP0CAT3 122 aa5.09□□□□□ -1.59
HMGXB4-202ENST00000418170 KRTAP10-3P60369 221 aa5.09□□□□□ -1.59
HMGXB4-202ENST00000418170 COA5Q86WW8 74 aa5.09□□□□□ -1.59
HMGXB4-202ENST00000418170 A0A0G2JQZ4 141 aa5.09□□□□□ -1.59
HMGXB4-202ENST00000418170 A0A1W2PNN7 141 aa5.09□□□□□ -1.59
HMGXB4-202ENST00000418170 CCDC168Q8NDH2 2452 aa5.09□□□□□ -1.6
HMGXB4-202ENST00000418170 FAM168BA1KXE4 195 aa5.08□□□□□ -1.6
HMGXB4-202ENST00000418170 CASC2Q6XLA1 102 aa5.08□□□□□ -1.6
HMGXB4-202ENST00000418170 C7orf65Q6ZTY9 151 aa5.08□□□□□ -1.6
HMGXB4-202ENST00000418170 SMR3AQ99954 134 aa5.08□□□□□ -1.6
HMGXB4-202ENST00000418170 A0A087WSZ3 146 aa5.08□□□□□ -1.6
HMGXB4-202ENST00000418170 RPL37AP61513 92 aaKnown RBP5.08□□□□□ -1.6
HMGXB4-202ENST00000418170 IGLV7-46A0A075B6I9 117 aa5.07□□□□□ -1.6
HMGXB4-202ENST00000418170 KRTAP7-1Q8IUC3 87 aa5.07□□□□□ -1.6
HMGXB4-202ENST00000418170 CNBPP62633 177 aaKnown RBP5.06□□□□□ -1.6
HMGXB4-202ENST00000418170 IGLV8-61A0A075B6I0 122 aa5.06□□□□□ -1.6
HMGXB4-202ENST00000418170 H3BNG1 76 aa5.06□□□□□ -1.6
HMGXB4-202ENST00000418170 MTORP42345 2549 aa5.06□□□□□ -1.6
HMGXB4-202ENST00000418170 MOBPQ13875 183 aa5.05□□□□□ -1.6
HMGXB4-202ENST00000418170 PLAC8Q9NZF1 115 aa5.05□□□□□ -1.6
HMGXB4-202ENST00000418170 PRKDCP78527 4128 aaKnown RBP5.05□□□□□ -1.6
HMGXB4-202ENST00000418170 DNHD1Q96M86 4753 aa5.05□□□□□ -1.6
HMGXB4-202ENST00000418170 LINC01558Q9Y6Z2 57 aa5.05□□□□□ -1.6
HMGXB4-202ENST00000418170 TEP1Q99973 2627 aaKnown RBP5.05□□□□□ -1.6
HMGXB4-202ENST00000418170 DNAH10Q8IVF4 4471 aa5.04□□□□□ -1.6
HMGXB4-202ENST00000418170 J3QKU1 62 aa5.04□□□□□ -1.6
HMGXB4-202ENST00000418170 A8MWP4 228 aa5.04□□□□□ -1.6
HMGXB4-202ENST00000418170 LINC01556Q5JQF7 62 aa5.04□□□□□ -1.6
HMGXB4-202ENST00000418170 REG3GQ6UW15 175 aa5.03□□□□□ -1.6
HMGXB4-202ENST00000418170 BAHCC1Q9P281 2608 aa5.03□□□□□ -1.6
HMGXB4-202ENST00000418170 SPAG11AQ6PDA7 123 aa5.02□□□□□ -1.61
HMGXB4-202ENST00000418170 LINC00472Q9H8W2 130 aa5.01□□□□□ -1.61
HMGXB4-202ENST00000418170 F8P00451 2351 aa5.01□□□□□ -1.61
HMGXB4-202ENST00000418170 MAST4O15021 2626 aa5.01□□□□□ -1.61
HMGXB4-202ENST00000418170 SPINK7P58062 85 aa5□□□□□ -1.61
HMGXB4-202ENST00000418170 MMP24-AS1A0A0U1RRL7 71 aa4.99□□□□□ -1.61
HMGXB4-202ENST00000418170 C11orf45Q8TAV5 145 aa4.99□□□□□ -1.61
HMGXB4-202ENST00000418170 PCOTHQ58A44 107 aa4.99□□□□□ -1.61
HMGXB4-202ENST00000418170 PRLHP81277 87 aa4.98□□□□□ -1.61
HMGXB4-202ENST00000418170 C8orf87E5RJ46 101 aa4.98□□□□□ -1.61
HMGXB4-202ENST00000418170 TENM3Q9P273 2699 aa4.98□□□□□ -1.61
HMGXB4-202ENST00000418170 DNAH10OSP0CZ25 163 aa4.97□□□□□ -1.61
HMGXB4-202ENST00000418170 PLECQ15149 4684 aaKnown RBP4.97□□□□□ -1.61
HMGXB4-202ENST00000418170 STARD9Q9P2P6 4700 aa4.96□□□□□ -1.61
HMGXB4-202ENST00000418170 H0Y9J4 135 aa4.96□□□□□ -1.62
HMGXB4-202ENST00000418170 CASC10Q5T4H9 136 aa4.96□□□□□ -1.62
HMGXB4-202ENST00000418170 TP53AIP1Q9HCN2 124 aa4.96□□□□□ -1.62
HMGXB4-202ENST00000418170 HRES1P13985 223 aa4.96□□□□□ -1.62
HMGXB4-202ENST00000418170 C4orf48Q5BLP8 95 aa4.96□□□□□ -1.62
HMGXB4-202ENST00000418170 ASB16-AS1Q495Z4 193 aa4.95□□□□□ -1.62
HMGXB4-202ENST00000418170 Q6ZR54 194 aa4.95□□□□□ -1.62
HMGXB4-202ENST00000418170 TENM2Q9NT68 2774 aa4.95□□□□□ -1.62
HMGXB4-202ENST00000418170 SPRR1BP22528 89 aa4.94□□□□□ -1.62
HMGXB4-202ENST00000418170 LINC00313P59037 77 aa4.94□□□□□ -1.62
HMGXB4-202ENST00000418170 ATRQ13535 2644 aa4.94□□□□□ -1.62
HMGXB4-202ENST00000418170 IGKV2-24A0A0C4DH68 120 aa4.94□□□□□ -1.62
HMGXB4-202ENST00000418170 DNAH2Q9P225 4427 aa4.92□□□□□ -1.62
HMGXB4-202ENST00000418170 FRAS1Q86XX4 4008 aa4.92□□□□□ -1.62
HMGXB4-202ENST00000418170 DEFB131BA0A096LNP1 70 aa4.91□□□□□ -1.62
HMGXB4-202ENST00000418170 SRRM2Q9UQ35 2752 aaKnown RBP4.91□□□□□ -1.62
HMGXB4-202ENST00000418170 NBEAL1Q6ZS30 2694 aa4.91□□□□□ -1.62
HMGXB4-202ENST00000418170 KMT2AQ03164 3969 aa4.9□□□□□ -1.62
HMGXB4-202ENST00000418170 INAFM1C9JVW0 142 aa4.9□□□□□ -1.62
HMGXB4-202ENST00000418170 PRAC1Q96KF2 57 aa4.9□□□□□ -1.62
HMGXB4-202ENST00000418170 HECTD4Q9Y4D8 3996 aa4.9□□□□□ -1.62
HMGXB4-202ENST00000418170 STAB1Q9NY15 2570 aa4.9□□□□□ -1.63
HMGXB4-202ENST00000418170 A0A096LNI7 61 aa4.89□□□□□ -1.63
HMGXB4-202ENST00000418170 PLA2G1BP04054 148 aaKnown RBP4.89□□□□□ -1.63
HMGXB4-202ENST00000418170 Q96NJ1 140 aa4.89□□□□□ -1.63
HMGXB4-202ENST00000418170 C8orf17Q9NRJ1 99 aa4.89□□□□□ -1.63
HMGXB4-202ENST00000418170 FLNBO75369 2602 aaKnown RBP4.89□□□□□ -1.63
HMGXB4-202ENST00000418170 NOTCH2Q04721 2471 aa4.89□□□□□ -1.63
HMGXB4-202ENST00000418170 FBN3Q75N90 2809 aa4.88□□□□□ -1.63
HMGXB4-202ENST00000418170 VPS13DQ5THJ4 4388 aa4.88□□□□□ -1.63
HMGXB4-202ENST00000418170 LINC01554Q52M75 96 aa4.87□□□□□ -1.63
HMGXB4-202ENST00000418170 PRR26Q8N8Z3 221 aa4.87□□□□□ -1.63
HMGXB4-202ENST00000418170 ADM2Q7Z4H4 148 aa4.87□□□□□ -1.63
HMGXB4-202ENST00000418170 KRTAP11-1Q8IUC1 163 aa4.87□□□□□ -1.63
HMGXB4-202ENST00000418170 A0A1B0GVX0 72 aa4.85□□□□□ -1.63
HMGXB4-202ENST00000418170 MRPL34Q9BQ48 92 aaKnown RBP4.85□□□□□ -1.63
HMGXB4-202ENST00000418170 MEGF8Q7Z7M0 2845 aa4.85□□□□□ -1.63
HMGXB4-202ENST00000418170 A0A087X002 238 aa4.84□□□□□ -1.63
HMGXB4-202ENST00000418170 RTL8CO15255 209 aa4.84□□□□□ -1.64
HMGXB4-202ENST00000418170 IGHV6-1A0A0B4J1U7 121 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms