RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 LOC110117498A0A087WWA1 95 aa12.74□□□□□ -0.37
CASC3-203ENST00000418132 Q8N377 158 aa12.74□□□□□ -0.37
CASC3-203ENST00000418132 IMUPQ9GZP8 106 aa12.74□□□□□ -0.37
CASC3-203ENST00000418132 LRP1BQ9NZR2 4599 aa12.73□□□□□ -0.37
CASC3-203ENST00000418132 NDUFV3P56181 108 aaKnown RBP12.73□□□□□ -0.37
CASC3-203ENST00000418132 DEFB105AQ8NG35 78 aa12.73□□□□□ -0.37
CASC3-203ENST00000418132 DSCR8Q96T75 97 aa12.72□□□□□ -0.37
CASC3-203ENST00000418132 DYNC1H1Q14204 4646 aaKnown RBP12.72□□□□□ -0.37
CASC3-203ENST00000418132 ANAPC13Q9BS18 74 aa12.7□□□□□ -0.38
CASC3-203ENST00000418132 SRRM2Q9UQ35 2752 aaKnown RBP12.7□□□□□ -0.38
CASC3-203ENST00000418132 ZNF861PO60384 105 aa12.69□□□□□ -0.38
CASC3-203ENST00000418132 IGLV7-43P04211 117 aa12.68□□□□□ -0.38
CASC3-203ENST00000418132 PDE6GP18545 87 aa12.67□□□□□ -0.38
CASC3-203ENST00000418132 Q6JHZ5 121 aa12.67□□□□□ -0.38
CASC3-203ENST00000418132 IGKV3D-7A0A0C4DH55 119 aa12.66□□□□□ -0.38
CASC3-203ENST00000418132 TRBV7-4A0A0J9YYF1 115 aa12.66□□□□□ -0.38
CASC3-203ENST00000418132 SPRR1BP22528 89 aa12.63□□□□□ -0.39
CASC3-203ENST00000418132 C3orf22Q8N5N4 141 aa12.63□□□□□ -0.39
CASC3-203ENST00000418132 SMIM29Q86T20 159 aa12.63□□□□□ -0.39
CASC3-203ENST00000418132 FAM236AA0A1B0GUQ0 79 aa12.62□□□□□ -0.39
CASC3-203ENST00000418132 FAM236BA0A1B0GV22 79 aa12.62□□□□□ -0.39
CASC3-203ENST00000418132 UBL5Q9BZL1 73 aa12.61□□□□□ -0.39
CASC3-203ENST00000418132 SPRR4Q96PI1 79 aa12.59□□□□□ -0.39
CASC3-203ENST00000418132 ZNF706Q9Y5V0 76 aaPredicted RBP12.58□□□□□ -0.4
CASC3-203ENST00000418132 APOBP04114 4563 aaKnown RBP12.56□□□□□ -0.4
CASC3-203ENST00000418132 LINC00483Q53H64 154 aa12.55□□□□□ -0.4
CASC3-203ENST00000418132 ATP5EP2Q5VTU8 51 aa12.55□□□□□ -0.4
CASC3-203ENST00000418132 Q6ZVQ6 151 aa12.53□□□□□ -0.4
CASC3-203ENST00000418132 A0A087WVE0 104 aa12.52□□□□□ -0.4
CASC3-203ENST00000418132 F8WEM9 126 aa12.52□□□□□ -0.4
CASC3-203ENST00000418132 SMR3BP02814 79 aaPredicted RBP12.51□□□□□ -0.41
CASC3-203ENST00000418132 RPL37AP61513 92 aaKnown RBP12.51□□□□□ -0.41
CASC3-203ENST00000418132 IGLV8-61A0A075B6I0 122 aa12.5□□□□□ -0.41
CASC3-203ENST00000418132 HIST1H4AP62805 103 aaKnown RBP12.5□□□□□ -0.41
CASC3-203ENST00000418132 VPS13BQ7Z7G8 4022 aa12.48□□□□□ -0.41
CASC3-203ENST00000418132 CCDC179H3BU77 68 aa12.47□□□□□ -0.41
CASC3-203ENST00000418132 CDK2AP2O75956 126 aa12.44□□□□□ -0.42
CASC3-203ENST00000418132 ANAPC11Q9NYG5 84 aa12.43□□□□□ -0.42
CASC3-203ENST00000418132 KRTAP10-4P60372 401 aaPredicted RBP12.42□□□□□ -0.42
CASC3-203ENST00000418132 IGFL1Q6UW32 110 aa12.42□□□□□ -0.42
CASC3-203ENST00000418132 ATOX1O00244 68 aa12.41□□□□□ -0.42
CASC3-203ENST00000418132 CXCL6P80162 114 aa12.41□□□□□ -0.42
CASC3-203ENST00000418132 A0A1W2PNM2 257 aa12.4□□□□□ -0.42
CASC3-203ENST00000418132 IGLV9-49A0A0B4J1Y8 123 aa12.39□□□□□ -0.43
CASC3-203ENST00000418132 SPINK6Q6UWN8 80 aa12.39□□□□□ -0.43
CASC3-203ENST00000418132 Q8NBF4 154 aa12.39□□□□□ -0.43
CASC3-203ENST00000418132 SVIPQ8NHG7 77 aa12.39□□□□□ -0.43
CASC3-203ENST00000418132 A0A0G2JQZ4 141 aa12.38□□□□□ -0.43
CASC3-203ENST00000418132 FAT1Q14517 4588 aa12.37□□□□□ -0.43
CASC3-203ENST00000418132 NREPQ16612 68 aa12.36□□□□□ -0.43
CASC3-203ENST00000418132 C9orf153Q5TBE3 101 aa12.36□□□□□ -0.43
CASC3-203ENST00000418132 A0A1B0GW54 56 aa12.35□□□□□ -0.43
CASC3-203ENST00000418132 KRTAP1-4P0C5Y4 121 aa12.35□□□□□ -0.43
CASC3-203ENST00000418132 FAM229BQ4G0N7 80 aa12.34□□□□□ -0.43
CASC3-203ENST00000418132 MOBPQ13875 183 aa12.33□□□□□ -0.44
CASC3-203ENST00000418132 CRYGAP11844 174 aa12.32□□□□□ -0.44
CASC3-203ENST00000418132 EPPK1P58107 5090 aaKnown RBP12.32□□□□□ -0.44
CASC3-203ENST00000418132 FAM229AH3BQW9 127 aa12.31□□□□□ -0.44
CASC3-203ENST00000418132 UQCRQO14949 82 aa12.31□□□□□ -0.44
CASC3-203ENST00000418132 COX7CP15954 63 aa12.31□□□□□ -0.44
CASC3-203ENST00000418132 PLA2G1BP04054 148 aaKnown RBP12.3□□□□□ -0.44
CASC3-203ENST00000418132 A0A087X002 238 aa12.29□□□□□ -0.44
CASC3-203ENST00000418132 HSPG2P98160 4391 aa12.29□□□□□ -0.44
CASC3-203ENST00000418132 RYR1P21817 5038 aa12.28□□□□□ -0.44
CASC3-203ENST00000418132 SERP2Q8N6R1 65 aa12.27□□□□□ -0.44
CASC3-203ENST00000418132 BPY2O14599 106 aa12.26□□□□□ -0.45
CASC3-203ENST00000418132 KRTAP13-2Q52LG2 175 aa12.26□□□□□ -0.45
CASC3-203ENST00000418132 SSBP3-AS1Q7Z2R9 100 aa12.26□□□□□ -0.45
CASC3-203ENST00000418132 Q5VSD8 79 aa12.24□□□□□ -0.45
CASC3-203ENST00000418132 Q8N9L7 120 aa12.24□□□□□ -0.45
CASC3-203ENST00000418132 KIAA1109Q2LD37 5005 aa12.23□□□□□ -0.45
CASC3-203ENST00000418132 A0A087WSZ3 146 aa12.21□□□□□ -0.45
CASC3-203ENST00000418132 IGKV4-1P06312 121 aa12.21□□□□□ -0.46
CASC3-203ENST00000418132 KRTAP17-1Q9BYP8 105 aa12.18□□□□□ -0.46
CASC3-203ENST00000418132 SS18L2Q9UHA2 77 aa12.17□□□□□ -0.46
CASC3-203ENST00000418132 CD164Q04900 197 aa12.16□□□□□ -0.46
CASC3-203ENST00000418132 HRCT1Q6UXD1 115 aa12.16□□□□□ -0.46
CASC3-203ENST00000418132 Q8N1X5 172 aa12.14□□□□□ -0.47
CASC3-203ENST00000418132 PRR26Q8N8Z3 221 aa12.13□□□□□ -0.47
CASC3-203ENST00000418132 TYMSOSQ8TAI1 123 aa12.12□□□□□ -0.47
CASC3-203ENST00000418132 TRAV7A0A075B6U4 112 aa12.11□□□□□ -0.47
CASC3-203ENST00000418132 DSCR10P59022 87 aa12.11□□□□□ -0.47
CASC3-203ENST00000418132 PKHD1L1Q86WI1 4243 aa12.11□□□□□ -0.47
CASC3-203ENST00000418132 SMIM20Q8N5G0 67 aa12.1□□□□□ -0.47
CASC3-203ENST00000418132 CYSTM1Q9H1C7 97 aa12.1□□□□□ -0.47
CASC3-203ENST00000418132 DEFB116Q30KQ4 102 aa12.06□□□□□ -0.48
CASC3-203ENST00000418132 K7EQZ3 153 aa12.05□□□□□ -0.48
CASC3-203ENST00000418132 LINC00472Q9H8W2 130 aa12.05□□□□□ -0.48
CASC3-203ENST00000418132 C20orf197Q8N268 126 aa12.03□□□□□ -0.48
CASC3-203ENST00000418132 Q96NJ1 140 aa12.01□□□□□ -0.49
CASC3-203ENST00000418132 Q5XG85 94 aa12□□□□□ -0.49
CASC3-203ENST00000418132 C4orf48Q5BLP8 95 aa11.99□□□□□ -0.49
CASC3-203ENST00000418132 ASB16-AS1Q495Z4 193 aa11.98□□□□□ -0.49
CASC3-203ENST00000418132 LINC00304Q8N9R0 145 aa11.98□□□□□ -0.49
CASC3-203ENST00000418132 SPINK1P00995 79 aa11.98□□□□□ -0.49
CASC3-203ENST00000418132 OCR1Q9BZK8 76 aa11.98□□□□□ -0.49
CASC3-203ENST00000418132 SPAG11AQ6PDA7 123 aa11.96□□□□□ -0.49
CASC3-203ENST00000418132 J3KT08 172 aa11.95□□□□□ -0.5
CASC3-203ENST00000418132 LIMD2Q9BT23 127 aa11.94□□□□□ -0.5
CASC3-203ENST00000418132 RPS29P62273 56 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 160.5 ms