RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 LORP23490 312 aaPredicted RBP11.55□□□□□ -0.56
ACTB-203ENST00000417101 KRTAP10-6P60371 365 aaPredicted RBP11.55□□□□□ -0.56
ACTB-203ENST00000417101 COX6B2Q6YFQ2 88 aa11.55□□□□□ -0.56
ACTB-203ENST00000417101 hADV29S1A0JD25 119 aa11.54□□□□□ -0.56
ACTB-203ENST00000417101 M0R2T5 61 aa11.53□□□□□ -0.56
ACTB-203ENST00000417101 FLGP20930 4061 aaPredicted RBP11.53□□□□□ -0.56
ACTB-203ENST00000417101 Q6JHZ5 121 aa11.52□□□□□ -0.57
ACTB-203ENST00000417101 CLEC2BQ92478 149 aa11.51□□□□□ -0.57
ACTB-203ENST00000417101 IGFL1Q6UW32 110 aa11.5□□□□□ -0.57
ACTB-203ENST00000417101 TRBV7-7A0A0K0K1E9 115 aa11.49□□□□□ -0.57
ACTB-203ENST00000417101 HSBP1L1C9JCN9 74 aa11.49□□□□□ -0.57
ACTB-203ENST00000417101 OCIAD2Q56VL3 154 aa11.48□□□□□ -0.57
ACTB-203ENST00000417101 HIST3H2BBQ8N257 126 aa11.48□□□□□ -0.57
ACTB-203ENST00000417101 HIST1H2BLQ99880 126 aa11.48□□□□□ -0.57
ACTB-203ENST00000417101 S100A2P29034 98 aa11.46□□□□□ -0.57
ACTB-203ENST00000417101 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.44□□□□□ -0.58
ACTB-203ENST00000417101 OBSCN-AS1Q96MR7 158 aa11.44□□□□□ -0.58
ACTB-203ENST00000417101 C12orf57Q99622 126 aa11.44□□□□□ -0.58
ACTB-203ENST00000417101 SNHG12Q9BXW3 62 aa11.41□□□□□ -0.58
ACTB-203ENST00000417101 BVES-AS1Q5T3Y7 98 aa11.4□□□□□ -0.58
ACTB-203ENST00000417101 PPDPFLQ8WWR9 84 aa11.4□□□□□ -0.58
ACTB-203ENST00000417101 ATP11AUNQ6ZP68 121 aa11.39□□□□□ -0.59
ACTB-203ENST00000417101 HIST1H4GQ99525 98 aa11.39□□□□□ -0.59
ACTB-203ENST00000417101 H3BUT2 72 aa11.38□□□□□ -0.59
ACTB-203ENST00000417101 Q75L30 129 aa11.38□□□□□ -0.59
ACTB-203ENST00000417101 LST1O00453 97 aa11.36□□□□□ -0.59
ACTB-203ENST00000417101 Q6Q795 121 aa11.35□□□□□ -0.59
ACTB-203ENST00000417101 SCGB1D1O95968 90 aa11.34□□□□□ -0.59
ACTB-203ENST00000417101 S100A6P06703 90 aa11.31□□□□□ -0.6
ACTB-203ENST00000417101 Q96NJ1 140 aa11.31□□□□□ -0.6
ACTB-203ENST00000417101 COX8AP10176 69 aa11.3□□□□□ -0.6
ACTB-203ENST00000417101 CFC1P0CG37 223 aa11.28□□□□□ -0.6
ACTB-203ENST00000417101 SS18L2Q9UHA2 77 aa11.28□□□□□ -0.6
ACTB-203ENST00000417101 RAB37Q96AX2 223 aa11.26□□□□□ -0.61
ACTB-203ENST00000417101 DLEU1O43261 78 aa11.25□□□□□ -0.61
ACTB-203ENST00000417101 SNCGO76070 127 aa11.25□□□□□ -0.61
ACTB-203ENST00000417101 NDUFV3P56181 108 aaKnown RBP11.24□□□□□ -0.61
ACTB-203ENST00000417101 TEN1Q86WV5 123 aa11.24□□□□□ -0.61
ACTB-203ENST00000417101 H0YGX0 51 aa11.23□□□□□ -0.61
ACTB-203ENST00000417101 FAM218AQ96MZ4 157 aa11.23□□□□□ -0.61
ACTB-203ENST00000417101 C20orf166-AS1Q96NR2 134 aa11.22□□□□□ -0.61
ACTB-203ENST00000417101 C14orf144Q96I85 54 aa11.21□□□□□ -0.61
ACTB-203ENST00000417101 A0A087WSZ3 146 aa11.2□□□□□ -0.62
ACTB-203ENST00000417101 A8MUU9 505 aa11.2□□□□□ -0.62
ACTB-203ENST00000417101 A0A0B4J2C4 111 aa11.19□□□□□ -0.62
ACTB-203ENST00000417101 H3BMG7 143 aa11.17□□□□□ -0.62
ACTB-203ENST00000417101 HIGD1BQ9P298 99 aa11.17□□□□□ -0.62
ACTB-203ENST00000417101 PAM16Q9Y3D7 125 aa11.15□□□□□ -0.62
ACTB-203ENST00000417101 FABP2P12104 132 aa11.14□□□□□ -0.63
ACTB-203ENST00000417101 S100A1P23297 94 aa11.14□□□□□ -0.63
ACTB-203ENST00000417101 DSCR10P59022 87 aa11.13□□□□□ -0.63
ACTB-203ENST00000417101 SPATA45Q537H7 98 aa11.13□□□□□ -0.63
ACTB-203ENST00000417101 C2orf91Q6ZV80 131 aa11.13□□□□□ -0.63
ACTB-203ENST00000417101 TRBV20-1A0A075B6N2 111 aa11.12□□□□□ -0.63
ACTB-203ENST00000417101 A0A1B0GX51 115 aa11.11□□□□□ -0.63
ACTB-203ENST00000417101 GHRHP01286 108 aa11.11□□□□□ -0.63
ACTB-203ENST00000417101 SIGMAR1Q99720 223 aa11.1□□□□□ -0.63
ACTB-203ENST00000417101 PRO1854Q9UHT4 67 aa11.1□□□□□ -0.63
ACTB-203ENST00000417101 A0A1W2PNM2 257 aa11.09□□□□□ -0.63
ACTB-203ENST00000417101 CEND1Q8N111 149 aa11.09□□□□□ -0.63
ACTB-203ENST00000417101 VAMP8Q9BV40 100 aa11.07□□□□□ -0.64
ACTB-203ENST00000417101 KRTAP9-8Q9BYQ0 159 aa11.07□□□□□ -0.64
ACTB-203ENST00000417101 TMEM238LA0A1B0GVL6 79 aa11.05□□□□□ -0.64
ACTB-203ENST00000417101 A6NJY4 79 aa11.05□□□□□ -0.64
ACTB-203ENST00000417101 TRIAP1O43715 76 aa11.04□□□□□ -0.64
ACTB-203ENST00000417101 USH2AO75445 5202 aa11.03□□□□□ -0.64
ACTB-203ENST00000417101 FXYD2P54710 66 aa11.03□□□□□ -0.64
ACTB-203ENST00000417101 LINC00313P59037 77 aa11.03□□□□□ -0.64
ACTB-203ENST00000417101 KRTAP16-1A8MUX0 517 aa11.02□□□□□ -0.65
ACTB-203ENST00000417101 IGKV4-1P06312 121 aa11.02□□□□□ -0.65
ACTB-203ENST00000417101 A0A1B0GV72 72 aa11.01□□□□□ -0.65
ACTB-203ENST00000417101 ANKRD29Q8N6D5 301 aa11.01□□□□□ -0.65
ACTB-203ENST00000417101 TRBV7-4A0A0J9YYF1 115 aa10.99□□□□□ -0.65
ACTB-203ENST00000417101 DNAL4O96015 105 aa10.98□□□□□ -0.65
ACTB-203ENST00000417101 SSPOA2VEC9 5147 aa10.98□□□□□ -0.65
ACTB-203ENST00000417101 FAM236DA0A1B0GTK5 79 aa10.97□□□□□ -0.65
ACTB-203ENST00000417101 FAM236CP0DP71 79 aa10.97□□□□□ -0.65
ACTB-203ENST00000417101 ORMDL1Q9P0S3 153 aa10.97□□□□□ -0.65
ACTB-203ENST00000417101 NOTCH2NLQ7Z3S9 236 aa10.96□□□□□ -0.65
ACTB-203ENST00000417101 DEFB116Q30KQ4 102 aa10.95□□□□□ -0.66
ACTB-203ENST00000417101 H3BQ85 93 aa10.93□□□□□ -0.66
ACTB-203ENST00000417101 PSMB2P49721 201 aa10.93□□□□□ -0.66
ACTB-203ENST00000417101 LINC00472Q9H8W2 130 aa10.92□□□□□ -0.66
ACTB-203ENST00000417101 TMEM256-PLSCR3K7ERE1 68 aa10.91□□□□□ -0.66
ACTB-203ENST00000417101 CCKP06307 115 aa10.91□□□□□ -0.66
ACTB-203ENST00000417101 K7ERJ3 54 aa10.9□□□□□ -0.66
ACTB-203ENST00000417101 TRACP01848 142 aa10.9□□□□□ -0.66
ACTB-203ENST00000417101 IGHV6-1A0A0B4J1U7 121 aa10.89□□□□□ -0.67
ACTB-203ENST00000417101 MT2AP02795 61 aa10.89□□□□□ -0.67
ACTB-203ENST00000417101 HRES1P13985 223 aa10.89□□□□□ -0.67
ACTB-203ENST00000417101 RBM12B-AS1Q9P1G2 102 aa10.89□□□□□ -0.67
ACTB-203ENST00000417101 MPLKIPQ8TAP9 179 aa10.88□□□□□ -0.67
ACTB-203ENST00000417101 COX6CP09669 75 aa10.87□□□□□ -0.67
ACTB-203ENST00000417101 HSD52Q0P140 79 aa10.87□□□□□ -0.67
ACTB-203ENST00000417101 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.86□□□□□ -0.67
ACTB-203ENST00000417101 UBE2V1Q13404 147 aa10.83□□□□□ -0.68
ACTB-203ENST00000417101 VPS25Q9BRG1 176 aa10.82□□□□□ -0.68
ACTB-203ENST00000417101 KRTAP9-7A8MTY7 169 aa10.81□□□□□ -0.68
ACTB-203ENST00000417101 MT1FP04733 61 aa10.81□□□□□ -0.68
ACTB-203ENST00000417101 A0A1B0GVX0 72 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms