RNA–Protein interactions for RNA: ENST00000415143.1

SSR4P1-201, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 412 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-201ENST00000415143 TNP2Q05952 138 aa8.5□□□□□ -1.05
SSR4P1-201ENST00000415143 ST20-AS1Q8NBB2 130 aa8.5□□□□□ -1.05
SSR4P1-201ENST00000415143 HERC1Q15751 4861 aa8.49□□□□□ -1.05
SSR4P1-201ENST00000415143 Q8NBF4 154 aa8.49□□□□□ -1.05
SSR4P1-201ENST00000415143 BPY2O14599 106 aa8.48□□□□□ -1.05
SSR4P1-201ENST00000415143 ERC2-IT1O76042 136 aa8.48□□□□□ -1.05
SSR4P1-201ENST00000415143 UBE2AP49459 152 aa8.48□□□□□ -1.05
SSR4P1-201ENST00000415143 PHF5AQ7RTV0 110 aaKnown RBP8.48□□□□□ -1.05
SSR4P1-201ENST00000415143 A0A087WTM6 91 aa8.47□□□□□ -1.05
SSR4P1-201ENST00000415143 CRYGAP11844 174 aa8.47□□□□□ -1.05
SSR4P1-201ENST00000415143 HIGD2AQ9BW72 106 aa8.47□□□□□ -1.05
SSR4P1-201ENST00000415143 VPS13DQ5THJ4 4388 aa8.46□□□□□ -1.05
SSR4P1-201ENST00000415143 SPRR4Q96PI1 79 aa8.46□□□□□ -1.06
SSR4P1-201ENST00000415143 IGLV8-61A0A075B6I0 122 aa8.45□□□□□ -1.06
SSR4P1-201ENST00000415143 CHTF8P0CG12 524 aa8.45□□□□□ -1.06
SSR4P1-201ENST00000415143 SPRR1BP22528 89 aa8.45□□□□□ -1.06
SSR4P1-201ENST00000415143 PRLHP81277 87 aa8.45□□□□□ -1.06
SSR4P1-201ENST00000415143 Q6ZR54 194 aa8.45□□□□□ -1.06
SSR4P1-201ENST00000415143 DYNC1H1Q14204 4646 aaKnown RBP8.44□□□□□ -1.06
SSR4P1-201ENST00000415143 C1orf134Q5TEV5 83 aa8.44□□□□□ -1.06
SSR4P1-201ENST00000415143 TRAV7A0A075B6U4 112 aa8.43□□□□□ -1.06
SSR4P1-201ENST00000415143 A0A1W2PNM2 257 aa8.43□□□□□ -1.06
SSR4P1-201ENST00000415143 EPM2AB3EWF7 344 aa8.43□□□□□ -1.06
SSR4P1-201ENST00000415143 SMIM29Q86T20 159 aa8.43□□□□□ -1.06
SSR4P1-201ENST00000415143 SPACA4Q8TDM5 124 aa8.43□□□□□ -1.06
SSR4P1-201ENST00000415143 DNAH6Q9C0G6 4158 aa8.42□□□□□ -1.06
SSR4P1-201ENST00000415143 RTL8CO15255 209 aa8.41□□□□□ -1.06
SSR4P1-201ENST00000415143 DNAH11Q96DT5 4516 aa8.41□□□□□ -1.06
SSR4P1-201ENST00000415143 FAT2Q9NYQ8 4349 aa8.41□□□□□ -1.06
SSR4P1-201ENST00000415143 ZNF706Q9Y5V0 76 aaPredicted RBP8.4□□□□□ -1.06
SSR4P1-201ENST00000415143 DNAH2Q9P225 4427 aa8.4□□□□□ -1.07
SSR4P1-201ENST00000415143 SCXQ7RTU7 201 aa8.39□□□□□ -1.07
SSR4P1-201ENST00000415143 HSPG2P98160 4391 aa8.39□□□□□ -1.07
SSR4P1-201ENST00000415143 IGLV5-52A0A0A0MRZ9 124 aa8.38□□□□□ -1.07
SSR4P1-201ENST00000415143 SS18L2Q9UHA2 77 aa8.38□□□□□ -1.07
SSR4P1-201ENST00000415143 IGFL1Q6UW32 110 aa8.37□□□□□ -1.07
SSR4P1-201ENST00000415143 A0A1B0GVY2 172 aa8.36□□□□□ -1.07
SSR4P1-201ENST00000415143 IGKV4-1P06312 121 aa8.36□□□□□ -1.07
SSR4P1-201ENST00000415143 RPL37AP61513 92 aaKnown RBP8.36□□□□□ -1.07
SSR4P1-201ENST00000415143 PLAC8Q9NZF1 115 aa8.35□□□□□ -1.07
SSR4P1-201ENST00000415143 TMEM258P61165 79 aa8.34□□□□□ -1.07
SSR4P1-201ENST00000415143 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.34□□□□□ -1.07
SSR4P1-201ENST00000415143 UBR4Q5T4S7 5183 aa8.34□□□□□ -1.07
SSR4P1-201ENST00000415143 DNAH17Q9UFH2 4485 aa8.33□□□□□ -1.08
SSR4P1-201ENST00000415143 KRTAP13-1Q8IUC0 172 aa8.33□□□□□ -1.08
SSR4P1-201ENST00000415143 KRTAP11-1Q8IUC1 163 aa8.33□□□□□ -1.08
SSR4P1-201ENST00000415143 LINC00336Q6ZUF6 198 aa8.32□□□□□ -1.08
SSR4P1-201ENST00000415143 PANO1I0J062 215 aa8.31□□□□□ -1.08
SSR4P1-201ENST00000415143 DMBT1Q9UGM3 2413 aaPredicted RBP8.3□□□□□ -1.08
SSR4P1-201ENST00000415143 NDUFC1O43677 76 aa8.3□□□□□ -1.08
SSR4P1-201ENST00000415143 PKD1P98161 4303 aa8.3□□□□□ -1.08
SSR4P1-201ENST00000415143 C20orf197Q8N268 126 aa8.29□□□□□ -1.08
SSR4P1-201ENST00000415143 A0A087WSZ3 146 aa8.28□□□□□ -1.08
SSR4P1-201ENST00000415143 J3KT08 172 aa8.27□□□□□ -1.09
SSR4P1-201ENST00000415143 ZNF861PO60384 105 aa8.27□□□□□ -1.09
SSR4P1-201ENST00000415143 LINC00483Q53H64 154 aa8.27□□□□□ -1.09
SSR4P1-201ENST00000415143 Q8N9L7 120 aa8.27□□□□□ -1.09
SSR4P1-201ENST00000415143 KLKP1Q107X0 134 aa8.26□□□□□ -1.09
SSR4P1-201ENST00000415143 DSCR10P59022 87 aa8.25□□□□□ -1.09
SSR4P1-201ENST00000415143 PSORS1C2Q9UIG4 136 aa8.25□□□□□ -1.09
SSR4P1-201ENST00000415143 HCG22E2RYF7 251 aa8.23□□□□□ -1.09
SSR4P1-201ENST00000415143 RPS28P62857 69 aaKnown RBP8.23□□□□□ -1.09
SSR4P1-201ENST00000415143 OCR1Q9BZK8 76 aa8.22□□□□□ -1.09
SSR4P1-201ENST00000415143 K7EQZ3 153 aa8.21□□□□□ -1.1
SSR4P1-201ENST00000415143 NDUFB1O75438 58 aa8.21□□□□□ -1.1
SSR4P1-201ENST00000415143 IGLV9-49A0A0B4J1Y8 123 aa8.2□□□□□ -1.1
SSR4P1-201ENST00000415143 ATP5EP56381 51 aaPredicted RBP8.2□□□□□ -1.1
SSR4P1-201ENST00000415143 TMEM254Q8TBM7 123 aa8.2□□□□□ -1.1
SSR4P1-201ENST00000415143 IGLV7-43P04211 117 aa8.19□□□□□ -1.1
SSR4P1-201ENST00000415143 A0A0G2JQZ4 141 aa8.18□□□□□ -1.1
SSR4P1-201ENST00000415143 A8MWP4 228 aa8.18□□□□□ -1.1
SSR4P1-201ENST00000415143 Q8N1X5 172 aa8.18□□□□□ -1.1
SSR4P1-201ENST00000415143 APOBP04114 4563 aaKnown RBP8.18□□□□□ -1.1
SSR4P1-201ENST00000415143 LRP1BQ9NZR2 4599 aa8.17□□□□□ -1.1
SSR4P1-201ENST00000415143 FAM236DA0A1B0GTK5 79 aa8.17□□□□□ -1.1
SSR4P1-201ENST00000415143 FAM236CP0DP71 79 aa8.17□□□□□ -1.1
SSR4P1-201ENST00000415143 C5orf47Q569G3 176 aa8.17□□□□□ -1.1
SSR4P1-201ENST00000415143 LINC00472Q9H8W2 130 aa8.17□□□□□ -1.1
SSR4P1-201ENST00000415143 CDK2AP2O75956 126 aa8.16□□□□□ -1.1
SSR4P1-201ENST00000415143 PRR15Q8IV56 129 aa8.16□□□□□ -1.1
SSR4P1-201ENST00000415143 FAM30AQ9NZY2 134 aa8.15□□□□□ -1.1
SSR4P1-201ENST00000415143 H7BZZ5 65 aa8.14□□□□□ -1.11
SSR4P1-201ENST00000415143 CYSTM1Q9H1C7 97 aa8.14□□□□□ -1.11
SSR4P1-201ENST00000415143 SNURFQ9Y675 71 aa8.14□□□□□ -1.11
SSR4P1-201ENST00000415143 A0A0U1RQV1 116 aa8.13□□□□□ -1.11
SSR4P1-201ENST00000415143 MOBPQ13875 183 aa8.13□□□□□ -1.11
SSR4P1-201ENST00000415143 DEFB116Q30KQ4 102 aa8.13□□□□□ -1.11
SSR4P1-201ENST00000415143 SSBP3-AS1Q7Z2R9 100 aa8.13□□□□□ -1.11
SSR4P1-201ENST00000415143 CASC2Q6XLA1 102 aa8.12□□□□□ -1.11
SSR4P1-201ENST00000415143 MP68P56378 58 aa8.11□□□□□ -1.11
SSR4P1-201ENST00000415143 CD164Q04900 197 aa8.11□□□□□ -1.11
SSR4P1-201ENST00000415143 CIRBP-AS1Q8TBR5 109 aa8.11□□□□□ -1.11
SSR4P1-201ENST00000415143 H3BPC8 53 aa8.1□□□□□ -1.11
SSR4P1-201ENST00000415143 WFDC13Q8IUB5 93 aa8.1□□□□□ -1.11
SSR4P1-201ENST00000415143 KRTAP10-2P60368 255 aa8.09□□□□□ -1.11
SSR4P1-201ENST00000415143 Q6ZSA8 131 aa8.09□□□□□ -1.11
SSR4P1-201ENST00000415143 SERP1Q9Y6X1 66 aa8.09□□□□□ -1.11
SSR4P1-201ENST00000415143 DNAH5Q8TE73 4624 aa8.09□□□□□ -1.12
SSR4P1-201ENST00000415143 KRTAP29-1A8MX34 341 aaPredicted RBP8.07□□□□□ -1.12
SSR4P1-201ENST00000415143 MYCBP2O75592 4640 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms