RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 ST20-AS1Q8NBB2 130 aa4.07□□□□□ -1.76
VPS41-204ENST00000413141 ZNF861PO60384 105 aa4.06□□□□□ -1.76
VPS41-204ENST00000413141 IGLV7-43P04211 117 aa4.06□□□□□ -1.76
VPS41-204ENST00000413141 LCE1DQ5T752 114 aa4.06□□□□□ -1.76
VPS41-204ENST00000413141 PPDPFLQ8WWR9 84 aa4.06□□□□□ -1.76
VPS41-204ENST00000413141 APOBP04114 4563 aaKnown RBP4.06□□□□□ -1.76
VPS41-204ENST00000413141 TEX49A0A1B0GTD5 131 aa4.05□□□□□ -1.76
VPS41-204ENST00000413141 Q8N377 158 aa4.05□□□□□ -1.76
VPS41-204ENST00000413141 DEFB105AQ8NG35 78 aa4.05□□□□□ -1.76
VPS41-204ENST00000413141 A0A1B0GV72 72 aa4.04□□□□□ -1.76
VPS41-204ENST00000413141 OBSCN-AS1Q96MR7 158 aa4.04□□□□□ -1.76
VPS41-204ENST00000413141 JMJD7-PLA2G4BH0Y9G9 81 aa4.03□□□□□ -1.76
VPS41-204ENST00000413141 SPRR1BP22528 89 aa4.03□□□□□ -1.76
VPS41-204ENST00000413141 NDUFV3P56181 108 aaKnown RBP4.03□□□□□ -1.76
VPS41-204ENST00000413141 RPL37AP61513 92 aaKnown RBP4.03□□□□□ -1.76
VPS41-204ENST00000413141 C3orf22Q8N5N4 141 aa4.03□□□□□ -1.76
VPS41-204ENST00000413141 SPRR4Q96PI1 79 aa4.03□□□□□ -1.76
VPS41-204ENST00000413141 LAMTOR3Q9UHA4 124 aa4.03□□□□□ -1.76
VPS41-204ENST00000413141 ZNF706Q9Y5V0 76 aaPredicted RBP4.03□□□□□ -1.76
VPS41-204ENST00000413141 CDK2AP2O75956 126 aa4.02□□□□□ -1.77
VPS41-204ENST00000413141 SMR3BP02814 79 aaPredicted RBP4.02□□□□□ -1.77
VPS41-204ENST00000413141 LINC00483Q53H64 154 aa4.02□□□□□ -1.77
VPS41-204ENST00000413141 GAGE2AQ6NT46 116 aa4.02□□□□□ -1.77
VPS41-204ENST00000413141 SMIM29Q86T20 159 aa4.02□□□□□ -1.77
VPS41-204ENST00000413141 C14orf132Q9NPU4 83 aa4.02□□□□□ -1.77
VPS41-204ENST00000413141 EPPK1P58107 5090 aaKnown RBP4.01□□□□□ -1.77
VPS41-204ENST00000413141 RBM3P98179 157 aaKnown RBP4.01□□□□□ -1.77
VPS41-204ENST00000413141 VPS13BQ7Z7G8 4022 aa4□□□□□ -1.77
VPS41-204ENST00000413141 LOC110117498A0A087WWA1 95 aa4□□□□□ -1.77
VPS41-204ENST00000413141 TRBV7-4A0A0J9YYF1 115 aa4□□□□□ -1.77
VPS41-204ENST00000413141 F8WEM9 126 aa4□□□□□ -1.77
VPS41-204ENST00000413141 K7ERU9 68 aa4□□□□□ -1.77
VPS41-204ENST00000413141 KRTAP10-4P60372 401 aaPredicted RBP4□□□□□ -1.77
VPS41-204ENST00000413141 SRRM2Q9UQ35 2752 aaKnown RBP3.99□□□□□ -1.77
VPS41-204ENST00000413141 RYR1P21817 5038 aa3.99□□□□□ -1.77
VPS41-204ENST00000413141 IGLV8-61A0A075B6I0 122 aa3.99□□□□□ -1.77
VPS41-204ENST00000413141 J3QR89 54 aa3.99□□□□□ -1.77
VPS41-204ENST00000413141 Q6ZQT0 140 aa3.99□□□□□ -1.77
VPS41-204ENST00000413141 DSCR8Q96T75 97 aa3.99□□□□□ -1.77
VPS41-204ENST00000413141 IGLV9-49A0A0B4J1Y8 123 aa3.97□□□□□ -1.77
VPS41-204ENST00000413141 FAM240AA0A1B0GVK7 77 aa3.97□□□□□ -1.77
VPS41-204ENST00000413141 CCKP06307 115 aa3.97□□□□□ -1.77
VPS41-204ENST00000413141 KRTAP1-4P0C5Y4 121 aa3.97□□□□□ -1.77
VPS41-204ENST00000413141 PDE6GP18545 87 aa3.97□□□□□ -1.77
VPS41-204ENST00000413141 SPINK6Q6UWN8 80 aa3.97□□□□□ -1.77
VPS41-204ENST00000413141 ANAPC11Q9NYG5 84 aa3.97□□□□□ -1.77
VPS41-204ENST00000413141 HSPG2P98160 4391 aa3.96□□□□□ -1.78
VPS41-204ENST00000413141 FAT1Q14517 4588 aa3.96□□□□□ -1.78
VPS41-204ENST00000413141 PLA2G1BP04054 148 aaKnown RBP3.96□□□□□ -1.78
VPS41-204ENST00000413141 C21orf62-AS1Q17RA5 79 aa3.96□□□□□ -1.78
VPS41-204ENST00000413141 C9orf153Q5TBE3 101 aa3.96□□□□□ -1.78
VPS41-204ENST00000413141 Q5VSD8 79 aa3.96□□□□□ -1.78
VPS41-204ENST00000413141 IGFL1Q6UW32 110 aa3.96□□□□□ -1.78
VPS41-204ENST00000413141 Q8NBF4 154 aa3.96□□□□□ -1.78
VPS41-204ENST00000413141 MOBPQ13875 183 aa3.95□□□□□ -1.78
VPS41-204ENST00000413141 FAM229BQ4G0N7 80 aa3.95□□□□□ -1.78
VPS41-204ENST00000413141 Q6JHZ5 121 aa3.95□□□□□ -1.78
VPS41-204ENST00000413141 VPS25Q9BRG1 176 aa3.95□□□□□ -1.78
VPS41-204ENST00000413141 KRTAP4-9Q9BYQ8 210 aa3.95□□□□□ -1.78
VPS41-204ENST00000413141 KIAA1109Q2LD37 5005 aa3.94□□□□□ -1.78
VPS41-204ENST00000413141 A0A087X002 238 aa3.94□□□□□ -1.78
VPS41-204ENST00000413141 A0A0G2JQZ4 141 aa3.94□□□□□ -1.78
VPS41-204ENST00000413141 A0A1W2PNM2 257 aa3.94□□□□□ -1.78
VPS41-204ENST00000413141 ACYP1P07311 99 aa3.94□□□□□ -1.78
VPS41-204ENST00000413141 KRTAP13-2Q52LG2 175 aa3.93□□□□□ -1.78
VPS41-204ENST00000413141 KRTAP17-1Q9BYP8 105 aa3.93□□□□□ -1.78
VPS41-204ENST00000413141 CDIP1Q9H305 208 aa3.93□□□□□ -1.78
VPS41-204ENST00000413141 LINC00846Q9NV44 126 aa3.93□□□□□ -1.78
VPS41-204ENST00000413141 CRYGAP11844 174 aa3.92□□□□□ -1.78
VPS41-204ENST00000413141 Q6Q795 121 aa3.92□□□□□ -1.78
VPS41-204ENST00000413141 Q8N1X5 172 aa3.92□□□□□ -1.78
VPS41-204ENST00000413141 PKHD1L1Q86WI1 4243 aa3.91□□□□□ -1.78
VPS41-204ENST00000413141 A0A1B0GW54 56 aa3.91□□□□□ -1.78
VPS41-204ENST00000413141 BIRC6Q9NR09 4857 aa3.91□□□□□ -1.78
VPS41-204ENST00000413141 SSBP3-AS1Q7Z2R9 100 aa3.9□□□□□ -1.79
VPS41-204ENST00000413141 UBL5Q9BZL1 73 aa3.9□□□□□ -1.79
VPS41-204ENST00000413141 A0A087WSZ3 146 aa3.89□□□□□ -1.79
VPS41-204ENST00000413141 TRBV7-7A0A0K0K1E9 115 aa3.89□□□□□ -1.79
VPS41-204ENST00000413141 Q6ZVQ6 151 aa3.89□□□□□ -1.79
VPS41-204ENST00000413141 PRR26Q8N8Z3 221 aa3.89□□□□□ -1.79
VPS41-204ENST00000413141 HRCT1Q6UXD1 115 aa3.88□□□□□ -1.79
VPS41-204ENST00000413141 LINC00643Q86TS7 51 aa3.88□□□□□ -1.79
VPS41-204ENST00000413141 TYMSOSQ8TAI1 123 aa3.88□□□□□ -1.79
VPS41-204ENST00000413141 KRTAP4-2Q9BYR5 136 aa3.88□□□□□ -1.79
VPS41-204ENST00000413141 CD164Q04900 197 aa3.87□□□□□ -1.79
VPS41-204ENST00000413141 MT-ATP8P03928 68 aa3.86□□□□□ -1.79
VPS41-204ENST00000413141 NREPQ16612 68 aa3.86□□□□□ -1.79
VPS41-204ENST00000413141 ATP5EP2Q5VTU8 51 aa3.86□□□□□ -1.79
VPS41-204ENST00000413141 SS18L2Q9UHA2 77 aa3.86□□□□□ -1.79
VPS41-204ENST00000413141 LINC00304Q8N9R0 145 aa3.85□□□□□ -1.79
VPS41-204ENST00000413141 HERC2O95714 4834 aa3.85□□□□□ -1.79
VPS41-204ENST00000413141 IGKV3D-7A0A0C4DH55 119 aa3.84□□□□□ -1.79
VPS41-204ENST00000413141 CXCL6P80162 114 aa3.84□□□□□ -1.79
VPS41-204ENST00000413141 BPY2O14599 106 aa3.83□□□□□ -1.8
VPS41-204ENST00000413141 SPINK1P00995 79 aa3.83□□□□□ -1.8
VPS41-204ENST00000413141 RPS29P62273 56 aaKnown RBP3.83□□□□□ -1.8
VPS41-204ENST00000413141 Q5XG85 94 aa3.83□□□□□ -1.8
VPS41-204ENST00000413141 Q96NJ1 140 aa3.83□□□□□ -1.8
VPS41-204ENST00000413141 SIGMAR1Q99720 223 aa3.83□□□□□ -1.8
VPS41-204ENST00000413141 LIMD2Q9BT23 127 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms