RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 LAMTOR3Q9UHA4 124 aa11.17□□□□□ -0.62
CDC42-204ENST00000411827 MYCBP2O75592 4640 aa11.16□□□□□ -0.62
CDC42-204ENST00000411827 KRTAP1-4P0C5Y4 121 aa11.16□□□□□ -0.62
CDC42-204ENST00000411827 DEFB105AQ8NG35 78 aa11.16□□□□□ -0.62
CDC42-204ENST00000411827 LINC01547P58512 204 aaPredicted RBP11.15□□□□□ -0.62
CDC42-204ENST00000411827 Q8N377 158 aa11.15□□□□□ -0.62
CDC42-204ENST00000411827 K7EP34 96 aa11.13□□□□□ -0.63
CDC42-204ENST00000411827 OXTP01178 125 aa11.13□□□□□ -0.63
CDC42-204ENST00000411827 LINC01600Q96MT4 127 aa11.12□□□□□ -0.63
CDC42-204ENST00000411827 F8WEM9 126 aa11.11□□□□□ -0.63
CDC42-204ENST00000411827 UBE2V1Q13404 147 aa11.11□□□□□ -0.63
CDC42-204ENST00000411827 H3BMG7 143 aa11.1□□□□□ -0.63
CDC42-204ENST00000411827 BAALC-AS2P0C853 105 aa11.1□□□□□ -0.63
CDC42-204ENST00000411827 SMCPP49901 116 aaPredicted RBP11.1□□□□□ -0.63
CDC42-204ENST00000411827 C9JAW5 83 aa11.08□□□□□ -0.64
CDC42-204ENST00000411827 H3BT86 120 aa11.08□□□□□ -0.64
CDC42-204ENST00000411827 NDUFV3P56181 108 aaKnown RBP11.07□□□□□ -0.64
CDC42-204ENST00000411827 SSBP3-AS1Q7Z2R9 100 aa11.07□□□□□ -0.64
CDC42-204ENST00000411827 SMIM29Q86T20 159 aa11.07□□□□□ -0.64
CDC42-204ENST00000411827 LCE2BO14633 110 aa11.06□□□□□ -0.64
CDC42-204ENST00000411827 ANAPC11Q9NYG5 84 aa11.06□□□□□ -0.64
CDC42-204ENST00000411827 Q8NBF4 154 aa11.05□□□□□ -0.64
CDC42-204ENST00000411827 IGLV8-61A0A075B6I0 122 aa11.04□□□□□ -0.64
CDC42-204ENST00000411827 A0A087X002 238 aa11.04□□□□□ -0.64
CDC42-204ENST00000411827 Q6JHZ5 121 aa11.04□□□□□ -0.64
CDC42-204ENST00000411827 TYMSOSQ8TAI1 123 aa11.04□□□□□ -0.64
CDC42-204ENST00000411827 KRTAP29-1A8MX34 341 aaPredicted RBP11.03□□□□□ -0.64
CDC42-204ENST00000411827 ANKRD29Q8N6D5 301 aa11.03□□□□□ -0.64
CDC42-204ENST00000411827 PRR26Q8N8Z3 221 aa11.03□□□□□ -0.64
CDC42-204ENST00000411827 IGLV9-49A0A0B4J1Y8 123 aa11.02□□□□□ -0.65
CDC42-204ENST00000411827 FLG2Q5D862 2391 aaPredicted RBP11.02□□□□□ -0.65
CDC42-204ENST00000411827 F8W1H4 67 aa11.01□□□□□ -0.65
CDC42-204ENST00000411827 JMJD7-PLA2G4BH0Y9G9 81 aa11.01□□□□□ -0.65
CDC42-204ENST00000411827 C9orf153Q5TBE3 101 aa11.01□□□□□ -0.65
CDC42-204ENST00000411827 KRTAP10-8P60410 259 aa11□□□□□ -0.65
CDC42-204ENST00000411827 KRTAP13-2Q52LG2 175 aa11□□□□□ -0.65
CDC42-204ENST00000411827 PKHD1L1Q86WI1 4243 aa10.99□□□□□ -0.65
CDC42-204ENST00000411827 MOBPQ13875 183 aa10.99□□□□□ -0.65
CDC42-204ENST00000411827 C21orf62-AS1Q17RA5 79 aa10.99□□□□□ -0.65
CDC42-204ENST00000411827 C3orf22Q8N5N4 141 aa10.99□□□□□ -0.65
CDC42-204ENST00000411827 DMBT1Q9UGM3 2413 aaPredicted RBP10.99□□□□□ -0.65
CDC42-204ENST00000411827 SPAG11AQ6PDA7 123 aa10.97□□□□□ -0.65
CDC42-204ENST00000411827 PDE6GP18545 87 aa10.96□□□□□ -0.65
CDC42-204ENST00000411827 RBM3P98179 157 aaKnown RBP10.96□□□□□ -0.65
CDC42-204ENST00000411827 A0A1B0GV90 55 aa10.95□□□□□ -0.66
CDC42-204ENST00000411827 CD164Q04900 197 aa10.95□□□□□ -0.66
CDC42-204ENST00000411827 PRO0461Q9UI25 63 aa10.95□□□□□ -0.66
CDC42-204ENST00000411827 LRP1Q07954 4544 aaKnown RBP10.94□□□□□ -0.66
CDC42-204ENST00000411827 DSCR8Q96T75 97 aa10.94□□□□□ -0.66
CDC42-204ENST00000411827 FAT3Q8TDW7 4589 aa10.93□□□□□ -0.66
CDC42-204ENST00000411827 OBSCN-AS1Q96MR7 158 aa10.92□□□□□ -0.66
CDC42-204ENST00000411827 LINC00304Q8N9R0 145 aa10.91□□□□□ -0.66
CDC42-204ENST00000411827 SPINK1P00995 79 aa10.9□□□□□ -0.66
CDC42-204ENST00000411827 MT1HL1P0DM35 61 aa10.9□□□□□ -0.66
CDC42-204ENST00000411827 MTURNQ8N3F0 131 aa10.9□□□□□ -0.66
CDC42-204ENST00000411827 IGFL1Q6UW32 110 aa10.89□□□□□ -0.67
CDC42-204ENST00000411827 TRBV7-4A0A0J9YYF1 115 aa10.88□□□□□ -0.67
CDC42-204ENST00000411827 RPS29P62273 56 aaKnown RBP10.88□□□□□ -0.67
CDC42-204ENST00000411827 Q6Q795 121 aa10.88□□□□□ -0.67
CDC42-204ENST00000411827 LOC110117498A0A087WWA1 95 aa10.87□□□□□ -0.67
CDC42-204ENST00000411827 TEN1Q86WV5 123 aa10.87□□□□□ -0.67
CDC42-204ENST00000411827 A0A1B0GW54 56 aa10.86□□□□□ -0.67
CDC42-204ENST00000411827 LIMD2Q9BT23 127 aa10.82□□□□□ -0.68
CDC42-204ENST00000411827 HMCN2Q8NDA2 5059 aa10.81□□□□□ -0.68
CDC42-204ENST00000411827 CCKP06307 115 aa10.81□□□□□ -0.68
CDC42-204ENST00000411827 A0A1B0GV72 72 aa10.8□□□□□ -0.68
CDC42-204ENST00000411827 Q5XG85 94 aa10.8□□□□□ -0.68
CDC42-204ENST00000411827 Q6ZQT0 140 aa10.8□□□□□ -0.68
CDC42-204ENST00000411827 C14orf132Q9NPU4 83 aa10.8□□□□□ -0.68
CDC42-204ENST00000411827 TRBV7-7A0A0K0K1E9 115 aa10.79□□□□□ -0.68
CDC42-204ENST00000411827 ETDBQ3ZM63 59 aa10.79□□□□□ -0.68
CDC42-204ENST00000411827 SS18L2Q9UHA2 77 aa10.79□□□□□ -0.68
CDC42-204ENST00000411827 A0A1W2PNM2 257 aa10.76□□□□□ -0.69
CDC42-204ENST00000411827 A0A0G2JQZ4 141 aa10.74□□□□□ -0.69
CDC42-204ENST00000411827 HRCT1Q6UXD1 115 aa10.74□□□□□ -0.69
CDC42-204ENST00000411827 VPS25Q9BRG1 176 aa10.73□□□□□ -0.69
CDC42-204ENST00000411827 ASB16-AS1Q495Z4 193 aa10.72□□□□□ -0.69
CDC42-204ENST00000411827 A0A087WSZ3 146 aa10.69□□□□□ -0.7
CDC42-204ENST00000411827 UBR4Q5T4S7 5183 aa10.67□□□□□ -0.7
CDC42-204ENST00000411827 TNXBP22105 4242 aa10.67□□□□□ -0.7
CDC42-204ENST00000411827 ACYP1P07311 99 aa10.64□□□□□ -0.71
CDC42-204ENST00000411827 FP248Q71RG6 208 aaPredicted RBP10.63□□□□□ -0.71
CDC42-204ENST00000411827 J3QR89 54 aa10.62□□□□□ -0.71
CDC42-204ENST00000411827 FAM240AA0A1B0GVK7 77 aa10.61□□□□□ -0.71
CDC42-204ENST00000411827 NREPQ16612 68 aa10.58□□□□□ -0.72
CDC42-204ENST00000411827 C1orf195Q5TG92 126 aa10.58□□□□□ -0.72
CDC42-204ENST00000411827 J3KT08 172 aa10.57□□□□□ -0.72
CDC42-204ENST00000411827 UBL5Q9BZL1 73 aa10.56□□□□□ -0.72
CDC42-204ENST00000411827 LINC00472Q9H8W2 130 aa10.54□□□□□ -0.72
CDC42-204ENST00000411827 LINC00846Q9NV44 126 aa10.51□□□□□ -0.73
CDC42-204ENST00000411827 Q96NJ1 140 aa10.5□□□□□ -0.73
CDC42-204ENST00000411827 PRR4Q16378 134 aa10.49□□□□□ -0.73
CDC42-204ENST00000411827 Q6ZVQ6 151 aa10.49□□□□□ -0.73
CDC42-204ENST00000411827 RETNLBQ9BQ08 111 aa10.49□□□□□ -0.73
CDC42-204ENST00000411827 IGLV7-46A0A075B6I9 117 aa10.48□□□□□ -0.73
CDC42-204ENST00000411827 K7ERU9 68 aa10.48□□□□□ -0.73
CDC42-204ENST00000411827 LCE2AQ5TA79 106 aaPredicted RBP10.48□□□□□ -0.73
CDC42-204ENST00000411827 IGKV4-1P06312 121 aa10.47□□□□□ -0.73
CDC42-204ENST00000411827 SIGMAR1Q99720 223 aa10.45□□□□□ -0.74
CDC42-204ENST00000411827 BPY2O14599 106 aa10.44□□□□□ -0.74
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