RNA–Protein interactions for RNA: ENST00000409776.6

RGPD1-202, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 6,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-202ENST00000409776 DNAH3Q8TD57 4116 aa2.44□□□□□ -2.02
RGPD1-202ENST00000409776 Q6ZPA2 131 aa2.43□□□□□ -2.02
RGPD1-202ENST00000409776 SPTA1P02549 2419 aa2.43□□□□□ -2.02
RGPD1-202ENST00000409776 DNAH7Q8WXX0 4024 aa2.42□□□□□ -2.02
RGPD1-202ENST00000409776 COL5A1P20908 1838 aaPredicted RBP2.42□□□□□ -2.02
RGPD1-202ENST00000409776 A0A096LNT2 108 aa2.42□□□□□ -2.02
RGPD1-202ENST00000409776 FAM208BQ5VWN6 2430 aa2.41□□□□□ -2.02
RGPD1-202ENST00000409776 TCF20Q9UGU0 1960 aaKnown RBP2.41□□□□□ -2.02
RGPD1-202ENST00000409776 VPS13DQ5THJ4 4388 aa2.41□□□□□ -2.02
RGPD1-202ENST00000409776 GIG44P09565 113 aaPredicted RBP2.4□□□□□ -2.02
RGPD1-202ENST00000409776 GVINP1Q7Z2Y8 2422 aa2.4□□□□□ -2.03
RGPD1-202ENST00000409776 SMR3BP02814 79 aaPredicted RBP2.4□□□□□ -2.03
RGPD1-202ENST00000409776 RAI1Q7Z5J4 1906 aaPredicted RBP2.4□□□□□ -2.03
RGPD1-202ENST00000409776 Q5VSD8 79 aa2.4□□□□□ -2.03
RGPD1-202ENST00000409776 WWC2-AS2Q96NR7 200 aa2.4□□□□□ -2.03
RGPD1-202ENST00000409776 USF3Q68DE3 2245 aa2.4□□□□□ -2.03
RGPD1-202ENST00000409776 PTPRBP23467 1997 aa2.4□□□□□ -2.03
RGPD1-202ENST00000409776 ANK3Q12955 4377 aaKnown RBP2.39□□□□□ -2.03
RGPD1-202ENST00000409776 PRUNE2Q8WUY3 3088 aa2.39□□□□□ -2.03
RGPD1-202ENST00000409776 KMT2AQ03164 3969 aa2.39□□□□□ -2.03
RGPD1-202ENST00000409776 COL4A1P02462 1669 aa2.39□□□□□ -2.03
RGPD1-202ENST00000409776 ZNF462Q96JM2 2506 aa2.39□□□□□ -2.03
RGPD1-202ENST00000409776 COL4A5P29400 1685 aa2.39□□□□□ -2.03
RGPD1-202ENST00000409776 PLXNB3Q9ULL4 1909 aa2.38□□□□□ -2.03
RGPD1-202ENST00000409776 CREBBPQ92793 2442 aa2.38□□□□□ -2.03
RGPD1-202ENST00000409776 KRTAP10-8P60410 259 aa2.38□□□□□ -2.03
RGPD1-202ENST00000409776 ADAMTS20P59510 1910 aa2.38□□□□□ -2.03
RGPD1-202ENST00000409776 A0A0C4DFX4 3053 aa2.38□□□□□ -2.03
RGPD1-202ENST00000409776 TRIOO75962 3097 aa2.37□□□□□ -2.03
RGPD1-202ENST00000409776 LAMA1P25391 3075 aa2.37□□□□□ -2.03
RGPD1-202ENST00000409776 SPTAN1Q13813 2472 aaKnown RBP2.37□□□□□ -2.03
RGPD1-202ENST00000409776 PRKDCP78527 4128 aaKnown RBP2.37□□□□□ -2.03
RGPD1-202ENST00000409776 INE1O15225 51 aa2.37□□□□□ -2.03
RGPD1-202ENST00000409776 COL4A2P08572 1712 aa2.36□□□□□ -2.03
RGPD1-202ENST00000409776 ABCA2Q9BZC7 2435 aa2.36□□□□□ -2.03
RGPD1-202ENST00000409776 HECTD4Q9Y4D8 3996 aa2.36□□□□□ -2.03
RGPD1-202ENST00000409776 A0A087WTM6 91 aa2.36□□□□□ -2.03
RGPD1-202ENST00000409776 LRP4O75096 1905 aa2.35□□□□□ -2.03
RGPD1-202ENST00000409776 CPAMD8Q8IZJ3 1885 aa2.34□□□□□ -2.03
RGPD1-202ENST00000409776 ROS1P08922 2347 aa2.34□□□□□ -2.03
RGPD1-202ENST00000409776 C2CD3Q4AC94 2353 aa2.34□□□□□ -2.03
RGPD1-202ENST00000409776 LINC00472Q9H8W2 130 aa2.33□□□□□ -2.04
RGPD1-202ENST00000409776 WDR87Q6ZQQ6 2873 aa2.33□□□□□ -2.04
RGPD1-202ENST00000409776 SPRR1AP35321 89 aa2.33□□□□□ -2.04
RGPD1-202ENST00000409776 NAV2Q8IVL1 2488 aa2.33□□□□□ -2.04
RGPD1-202ENST00000409776 NCOR2Q9Y618 2525 aa2.32□□□□□ -2.04
RGPD1-202ENST00000409776 DNAH1Q9P2D7 4330 aa2.32□□□□□ -2.04
RGPD1-202ENST00000409776 K7EIL1 84 aa2.32□□□□□ -2.04
RGPD1-202ENST00000409776 SPG11Q96JI7 2443 aa2.31□□□□□ -2.04
RGPD1-202ENST00000409776 FRYLO94915 3013 aa2.31□□□□□ -2.04
RGPD1-202ENST00000409776 C10orf142B7Z368 130 aa2.31□□□□□ -2.04
RGPD1-202ENST00000409776 PLAC8Q9NZF1 115 aa2.31□□□□□ -2.04
RGPD1-202ENST00000409776 PRO2289Q9P1D8 64 aa2.3□□□□□ -2.04
RGPD1-202ENST00000409776 HIVEP3Q5T1R4 2406 aa2.29□□□□□ -2.04
RGPD1-202ENST00000409776 CR1P17927 2039 aa2.29□□□□□ -2.04
RGPD1-202ENST00000409776 KRTAP29-1A8MX34 341 aaPredicted RBP2.28□□□□□ -2.04
RGPD1-202ENST00000409776 TRANK1O15050 2925 aa2.27□□□□□ -2.05
RGPD1-202ENST00000409776 FRYQ5TBA9 3013 aa2.27□□□□□ -2.05
RGPD1-202ENST00000409776 U3KQA8 63 aa2.27□□□□□ -2.05
RGPD1-202ENST00000409776 DOPEY1Q5JWR5 2465 aa2.27□□□□□ -2.05
RGPD1-202ENST00000409776 CHD9Q3L8U1 2897 aa2.26□□□□□ -2.05
RGPD1-202ENST00000409776 TTC28Q96AY4 2481 aa2.26□□□□□ -2.05
RGPD1-202ENST00000409776 PKHD1P08F94 4074 aa2.26□□□□□ -2.05
RGPD1-202ENST00000409776 Q6ZRN7 208 aaPredicted RBP2.26□□□□□ -2.05
RGPD1-202ENST00000409776 COL4A3Q01955 1670 aa2.25□□□□□ -2.05
RGPD1-202ENST00000409776 SMR3AQ99954 134 aa2.25□□□□□ -2.05
RGPD1-202ENST00000409776 LTBP2Q14767 1821 aa2.24□□□□□ -2.05
RGPD1-202ENST00000409776 SONP18583 2426 aaKnown RBP2.24□□□□□ -2.05
RGPD1-202ENST00000409776 PIEZO1Q92508 2521 aa2.23□□□□□ -2.05
RGPD1-202ENST00000409776 PKD1L2Q7Z442 2459 aa2.23□□□□□ -2.05
RGPD1-202ENST00000409776 KRTAP12-2P59991 146 aa2.23□□□□□ -2.05
RGPD1-202ENST00000409776 HIVEP2P31629 2446 aa2.23□□□□□ -2.05
RGPD1-202ENST00000409776 DMXL2Q8TDJ6 3036 aa2.22□□□□□ -2.05
RGPD1-202ENST00000409776 LOC100996750A0A140TA64 210 aa2.22□□□□□ -2.05
RGPD1-202ENST00000409776 KRTAP4-6Q9BYQ5 205 aa2.22□□□□□ -2.05
RGPD1-202ENST00000409776 ATMQ13315 3056 aa2.22□□□□□ -2.05
RGPD1-202ENST00000409776 CELSR1Q9NYQ6 3014 aa2.21□□□□□ -2.06
RGPD1-202ENST00000409776 CHD7Q9P2D1 2997 aa2.21□□□□□ -2.06
RGPD1-202ENST00000409776 VPS13BQ7Z7G8 4022 aa2.21□□□□□ -2.06
RGPD1-202ENST00000409776 MYO9AB2RTY4 2548 aa2.21□□□□□ -2.06
RGPD1-202ENST00000409776 PCSK5Q92824 1860 aa2.2□□□□□ -2.06
RGPD1-202ENST00000409776 DNAH6Q9C0G6 4158 aa2.2□□□□□ -2.06
RGPD1-202ENST00000409776 KRTAP13-2Q52LG2 175 aa2.19□□□□□ -2.06
RGPD1-202ENST00000409776 H0YAA0 97 aa2.19□□□□□ -2.06
RGPD1-202ENST00000409776 ALMS1Q8TCU4 4167 aa2.18□□□□□ -2.06
RGPD1-202ENST00000409776 LCE6AA0A183 80 aa2.18□□□□□ -2.06
RGPD1-202ENST00000409776 MUC6Q6W4X9 2439 aa2.18□□□□□ -2.06
RGPD1-202ENST00000409776 MUC22E2RYF6 1773 aaPredicted RBP2.17□□□□□ -2.06
RGPD1-202ENST00000409776 ACANP16112 2415 aa2.17□□□□□ -2.06
RGPD1-202ENST00000409776 PKHD1L1Q86WI1 4243 aa2.17□□□□□ -2.06
RGPD1-202ENST00000409776 ZZEF1O43149 2961 aa2.17□□□□□ -2.06
RGPD1-202ENST00000409776 TNXBP22105 4242 aa2.16□□□□□ -2.06
RGPD1-202ENST00000409776 KRTAP10-7P60409 375 aaPredicted RBP2.16□□□□□ -2.06
RGPD1-202ENST00000409776 DMXL1Q9Y485 3027 aa2.15□□□□□ -2.07
RGPD1-202ENST00000409776 FN1P02751 2386 aaKnown RBP2.15□□□□□ -2.07
RGPD1-202ENST00000409776 RIF1Q5UIP0 2472 aaKnown RBP2.14□□□□□ -2.07
RGPD1-202ENST00000409776 TPRXLQ17RH7 258 aa2.13□□□□□ -2.07
RGPD1-202ENST00000409776 KRTAP15-1Q3LI76 137 aa2.13□□□□□ -2.07
RGPD1-202ENST00000409776 ABCA12Q86UK0 2595 aa2.12□□□□□ -2.07
RGPD1-202ENST00000409776 KRTAP13-4Q3LI77 160 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms