RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 A8MWP4 228 aa4.68□□□□□ -1.66
SH3D19-203ENST00000409598 TRAV22A0A0B4J277 110 aa4.66□□□□□ -1.66
SH3D19-203ENST00000409598 LOC101927531A0A1B0GV80 90 aa4.66□□□□□ -1.66
SH3D19-203ENST00000409598 VPS13AQ96RL7 3174 aa4.66□□□□□ -1.66
SH3D19-203ENST00000409598 HIVEP1P15822 2718 aa4.66□□□□□ -1.66
SH3D19-203ENST00000409598 IGFL1Q6UW32 110 aa4.66□□□□□ -1.66
SH3D19-203ENST00000409598 A0A1B0GVX0 72 aa4.66□□□□□ -1.66
SH3D19-203ENST00000409598 SZT2Q5T011 3432 aa4.65□□□□□ -1.66
SH3D19-203ENST00000409598 PRR15Q8IV56 129 aa4.65□□□□□ -1.66
SH3D19-203ENST00000409598 KMT2BQ9UMN6 2715 aaPredicted RBP4.65□□□□□ -1.67
SH3D19-203ENST00000409598 IGLV8-61A0A075B6I0 122 aa4.65□□□□□ -1.67
SH3D19-203ENST00000409598 TENM4Q6N022 2769 aa4.64□□□□□ -1.67
SH3D19-203ENST00000409598 ACYP2P14621 99 aa4.64□□□□□ -1.67
SH3D19-203ENST00000409598 NSD1Q96L73 2696 aaPredicted RBP4.64□□□□□ -1.67
SH3D19-203ENST00000409598 FAM104AQ969W3 186 aa4.63□□□□□ -1.67
SH3D19-203ENST00000409598 H3BPC8 53 aa4.63□□□□□ -1.67
SH3D19-203ENST00000409598 KTN1-AS1Q86SY8 53 aa4.63□□□□□ -1.67
SH3D19-203ENST00000409598 LAMA1P25391 3075 aa4.63□□□□□ -1.67
SH3D19-203ENST00000409598 K7EQZ3 153 aa4.63□□□□□ -1.67
SH3D19-203ENST00000409598 CYP4F30PQ9H0H9 118 aa4.63□□□□□ -1.67
SH3D19-203ENST00000409598 C8orf17Q9NRJ1 99 aa4.62□□□□□ -1.67
SH3D19-203ENST00000409598 STAB2Q8WWQ8 2551 aa4.62□□□□□ -1.67
SH3D19-203ENST00000409598 MAP1AP78559 2803 aaPredicted RBP4.61□□□□□ -1.67
SH3D19-203ENST00000409598 VCANP13611 3396 aa4.6□□□□□ -1.67
SH3D19-203ENST00000409598 UBR5O95071 2799 aaPredicted RBP4.6□□□□□ -1.67
SH3D19-203ENST00000409598 COA5Q86WW8 74 aa4.6□□□□□ -1.67
SH3D19-203ENST00000409598 Q8N377 158 aa4.59□□□□□ -1.67
SH3D19-203ENST00000409598 Q1T7F1 81 aa4.59□□□□□ -1.68
SH3D19-203ENST00000409598 DNAH14Q0VDD8 3507 aa4.59□□□□□ -1.68
SH3D19-203ENST00000409598 A0A1B0GU69 56 aa4.58□□□□□ -1.68
SH3D19-203ENST00000409598 OCR1Q9BZK8 76 aa4.58□□□□□ -1.68
SH3D19-203ENST00000409598 FRYQ5TBA9 3013 aa4.55□□□□□ -1.68
SH3D19-203ENST00000409598 Q6ZRN7 208 aaPredicted RBP4.55□□□□□ -1.68
SH3D19-203ENST00000409598 LCA10Q71F78 164 aa4.55□□□□□ -1.68
SH3D19-203ENST00000409598 CELSR3Q9NYQ7 3312 aa4.55□□□□□ -1.68
SH3D19-203ENST00000409598 TNRC18O15417 2968 aaPredicted RBP4.54□□□□□ -1.68
SH3D19-203ENST00000409598 HRES1P13985 223 aa4.54□□□□□ -1.68
SH3D19-203ENST00000409598 CSAG1Q6PB30 78 aa4.54□□□□□ -1.68
SH3D19-203ENST00000409598 FLNCQ14315 2725 aa4.53□□□□□ -1.68
SH3D19-203ENST00000409598 DMBT1Q9UGM3 2413 aaPredicted RBP4.52□□□□□ -1.69
SH3D19-203ENST00000409598 CDC42SE1Q9NRR8 79 aa4.52□□□□□ -1.69
SH3D19-203ENST00000409598 A0A1W2PNM2 257 aa4.51□□□□□ -1.69
SH3D19-203ENST00000409598 IGLV5-48A0A075B6I7 105 aa4.51□□□□□ -1.69
SH3D19-203ENST00000409598 RPS29P62273 56 aaKnown RBP4.51□□□□□ -1.69
SH3D19-203ENST00000409598 SPANXA2-OT1Q8N9U9 137 aa4.51□□□□□ -1.69
SH3D19-203ENST00000409598 A0A0G2JQZ4 141 aa4.5□□□□□ -1.69
SH3D19-203ENST00000409598 SPRR1BP22528 89 aa4.5□□□□□ -1.69
SH3D19-203ENST00000409598 KRTAP26-1Q6PEX3 210 aa4.5□□□□□ -1.69
SH3D19-203ENST00000409598 ZCCHC13Q8WW36 166 aaKnown RBP4.49□□□□□ -1.69
SH3D19-203ENST00000409598 NBEAQ8NFP9 2946 aa4.49□□□□□ -1.69
SH3D19-203ENST00000409598 SPRR1AP35321 89 aa4.49□□□□□ -1.69
SH3D19-203ENST00000409598 ITPR1Q14643 2758 aa4.48□□□□□ -1.69
SH3D19-203ENST00000409598 LINC01554Q52M75 96 aa4.47□□□□□ -1.69
SH3D19-203ENST00000409598 ADGRG4Q8IZF6 3080 aa4.46□□□□□ -1.7
SH3D19-203ENST00000409598 BOD1L1Q8NFC6 3051 aa4.46□□□□□ -1.7
SH3D19-203ENST00000409598 FRYLO94915 3013 aa4.46□□□□□ -1.7
SH3D19-203ENST00000409598 Q8NDZ9 215 aa4.46□□□□□ -1.7
SH3D19-203ENST00000409598 Q5VV11 94 aa4.45□□□□□ -1.7
SH3D19-203ENST00000409598 Q75L30 129 aa4.45□□□□□ -1.7
SH3D19-203ENST00000409598 Q8N9P0 234 aaPredicted RBP4.45□□□□□ -1.7
SH3D19-203ENST00000409598 LINC00483Q53H64 154 aa4.45□□□□□ -1.7
SH3D19-203ENST00000409598 REV3LO60673 3130 aa4.45□□□□□ -1.7
SH3D19-203ENST00000409598 UQCR11O14957 56 aa4.44□□□□□ -1.7
SH3D19-203ENST00000409598 MIR22HGQ0VDD5 57 aa4.44□□□□□ -1.7
SH3D19-203ENST00000409598 KRTAP29-1A8MX34 341 aaPredicted RBP4.44□□□□□ -1.7
SH3D19-203ENST00000409598 APCP25054 2843 aa4.44□□□□□ -1.7
SH3D19-203ENST00000409598 S4R3F8 94 aa4.44□□□□□ -1.7
SH3D19-203ENST00000409598 SPTBN5Q9NRC6 3674 aaKnown RBP4.44□□□□□ -1.7
SH3D19-203ENST00000409598 ASH1LQ9NR48 2969 aaKnown RBP4.43□□□□□ -1.7
SH3D19-203ENST00000409598 ATMQ13315 3056 aa4.43□□□□□ -1.7
SH3D19-203ENST00000409598 CAMK2N1Q7Z7J9 78 aa4.43□□□□□ -1.7
SH3D19-203ENST00000409598 COL6A3P12111 3177 aa4.43□□□□□ -1.7
SH3D19-203ENST00000409598 PANO1I0J062 215 aa4.42□□□□□ -1.7
SH3D19-203ENST00000409598 SPINK7P58062 85 aa4.41□□□□□ -1.7
SH3D19-203ENST00000409598 KALRNO60229 2985 aa4.41□□□□□ -1.7
SH3D19-203ENST00000409598 DMXL2Q8TDJ6 3036 aa4.41□□□□□ -1.7
SH3D19-203ENST00000409598 SPEGQ15772 3267 aa4.41□□□□□ -1.7
SH3D19-203ENST00000409598 PLAC4Q8WY50 150 aa4.4□□□□□ -1.71
SH3D19-203ENST00000409598 EYSQ5T1H1 3165 aa4.39□□□□□ -1.71
SH3D19-203ENST00000409598 PRAC1Q96KF2 57 aa4.39□□□□□ -1.71
SH3D19-203ENST00000409598 FREM2Q5SZK8 3169 aa4.39□□□□□ -1.71
SH3D19-203ENST00000409598 LINC01558Q9Y6Z2 57 aa4.38□□□□□ -1.71
SH3D19-203ENST00000409598 LRBAP50851 2863 aa4.38□□□□□ -1.71
SH3D19-203ENST00000409598 COL12A1Q99715 3063 aa4.38□□□□□ -1.71
SH3D19-203ENST00000409598 A0A087X002 238 aa4.38□□□□□ -1.71
SH3D19-203ENST00000409598 SPINT4Q6UDR6 99 aa4.37□□□□□ -1.71
SH3D19-203ENST00000409598 UTP20O75691 2785 aaKnown RBP4.36□□□□□ -1.71
SH3D19-203ENST00000409598 NBEAL2Q6ZNJ1 2754 aa4.35□□□□□ -1.71
SH3D19-203ENST00000409598 R4GN34 69 aa4.35□□□□□ -1.71
SH3D19-203ENST00000409598 A0A1B0GVY2 172 aa4.34□□□□□ -1.72
SH3D19-203ENST00000409598 RPL37P61927 97 aaKnown RBP4.32□□□□□ -1.72
SH3D19-203ENST00000409598 DMXL1Q9Y485 3027 aa4.32□□□□□ -1.72
SH3D19-203ENST00000409598 FLG2Q5D862 2391 aaPredicted RBP4.32□□□□□ -1.72
SH3D19-203ENST00000409598 USP34Q70CQ2 3546 aa4.31□□□□□ -1.72
SH3D19-203ENST00000409598 TACC2O95359 2948 aa4.31□□□□□ -1.72
SH3D19-203ENST00000409598 ASB16-AS1Q495Z4 193 aa4.3□□□□□ -1.72
SH3D19-203ENST00000409598 MMP24-AS1A0A0U1RRL7 71 aa4.3□□□□□ -1.72
SH3D19-203ENST00000409598 C20orf166-AS1Q96NR2 134 aa4.3□□□□□ -1.72
SH3D19-203ENST00000409598 LOC400499M0QZD8 3231 aa4.3□□□□□ -1.72
SH3D19-203ENST00000409598 TPRXLQ17RH7 258 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms