RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 EPRSP07814 1512 aaKnown RBP-0.9□□□□□ -2.55
PMS1-203ENST00000409593 DNAH17Q9UFH2 4485 aa-0.9□□□□□ -2.55
PMS1-203ENST00000409593 LYNX1G3V0Z9 82 aa-0.9□□□□□ -2.55
PMS1-203ENST00000409593 IAPPP10997 89 aa-0.9□□□□□ -2.55
PMS1-203ENST00000409593 PPP3R1P63098 170 aa-0.9□□□□□ -2.55
PMS1-203ENST00000409593 MT1LQ93083 61 aa-0.9□□□□□ -2.55
PMS1-203ENST00000409593 TSC22D3Q99576 134 aa-0.9□□□□□ -2.55
PMS1-203ENST00000409593 FAM107BQ9H098 131 aa-0.9□□□□□ -2.55
PMS1-203ENST00000409593 FANCAO15360 1455 aa-0.9□□□□□ -2.55
PMS1-203ENST00000409593 CHD7Q9P2D1 2997 aa-0.9□□□□□ -2.55
PMS1-203ENST00000409593 LCE6AA0A183 80 aa-0.91□□□□□ -2.55
PMS1-203ENST00000409593 F8WEM9 126 aa-0.91□□□□□ -2.55
PMS1-203ENST00000409593 LEPROTL1O95214 131 aa-0.91□□□□□ -2.55
PMS1-203ENST00000409593 ZNF720Q7Z2F6 126 aa-0.91□□□□□ -2.55
PMS1-203ENST00000409593 KRTAP8-1Q8IUC2 63 aa-0.91□□□□□ -2.55
PMS1-203ENST00000409593 SERP2Q8N6R1 65 aa-0.91□□□□□ -2.55
PMS1-203ENST00000409593 THOC2Q8NI27 1593 aaKnown RBP-0.91□□□□□ -2.55
PMS1-203ENST00000409593 GAFA1Q96PS6 74 aa-0.91□□□□□ -2.55
PMS1-203ENST00000409593 PARP4Q9UKK3 1724 aaKnown RBP-0.91□□□□□ -2.55
PMS1-203ENST00000409593 LTN1O94822 1766 aa-0.91□□□□□ -2.55
PMS1-203ENST00000409593 DNAH5Q8TE73 4624 aa-0.91□□□□□ -2.55
PMS1-203ENST00000409593 TRRAPQ9Y4A5 3859 aa-0.91□□□□□ -2.55
PMS1-203ENST00000409593 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.91□□□□□ -2.56
PMS1-203ENST00000409593 DOT1LQ8TEK3 1739 aa-0.91□□□□□ -2.56
PMS1-203ENST00000409593 TOGARAM1Q9Y4F4 1720 aa-0.91□□□□□ -2.56
PMS1-203ENST00000409593 TNP1P09430 55 aa-0.91□□□□□ -2.56
PMS1-203ENST00000409593 DEFB130BP0DP73 79 aa-0.91□□□□□ -2.56
PMS1-203ENST00000409593 DEFB130AP0DP74 79 aa-0.91□□□□□ -2.56
PMS1-203ENST00000409593 S100A12P80511 92 aa-0.91□□□□□ -2.56
PMS1-203ENST00000409593 MYO3AQ8NEV4 1616 aa-0.91□□□□□ -2.56
PMS1-203ENST00000409593 FYCO1Q9BQS8 1478 aa-0.91□□□□□ -2.56
PMS1-203ENST00000409593 ITSN2Q9NZM3 1697 aa-0.92□□□□□ -2.56
PMS1-203ENST00000409593 ZFYVE16Q7Z3T8 1539 aa-0.92□□□□□ -2.56
PMS1-203ENST00000409593 A0A1B0GUT8 65 aa-0.92□□□□□ -2.56
PMS1-203ENST00000409593 IQCF6A8MYZ5 107 aa-0.92□□□□□ -2.56
PMS1-203ENST00000409593 ATOX1O00244 68 aa-0.92□□□□□ -2.56
PMS1-203ENST00000409593 GNGT2O14610 69 aa-0.92□□□□□ -2.56
PMS1-203ENST00000409593 MT1BP07438 61 aa-0.92□□□□□ -2.56
PMS1-203ENST00000409593 MT1GP13640 62 aa-0.92□□□□□ -2.56
PMS1-203ENST00000409593 PMCHL2Q9BQD1 86 aa-0.92□□□□□ -2.56
PMS1-203ENST00000409593 TEX14Q8IWB6 1497 aa-0.92□□□□□ -2.56
PMS1-203ENST00000409593 DDX60LQ5H9U9 1706 aaKnown RBP-0.92□□□□□ -2.56
PMS1-203ENST00000409593 CDC42BPGQ6DT37 1551 aa-0.92□□□□□ -2.56
PMS1-203ENST00000409593 DIP2BQ9P265 1576 aa-0.92□□□□□ -2.56
PMS1-203ENST00000409593 RELNP78509 3460 aa-0.92□□□□□ -2.56
PMS1-203ENST00000409593 IFI6P09912 130 aa-0.93□□□□□ -2.56
PMS1-203ENST00000409593 MYO9AB2RTY4 2548 aa-0.93□□□□□ -2.56
PMS1-203ENST00000409593 BPTFQ12830 3046 aa-0.93□□□□□ -2.56
PMS1-203ENST00000409593 PLIN4Q96Q06 1357 aa-0.93□□□□□ -2.56
PMS1-203ENST00000409593 EYSQ5T1H1 3165 aa-0.93□□□□□ -2.56
PMS1-203ENST00000409593 ITSN1Q15811 1721 aa-0.93□□□□□ -2.56
PMS1-203ENST00000409593 UBR1Q8IWV7 1749 aa-0.93□□□□□ -2.56
PMS1-203ENST00000409593 UQCRHLA0A096LP55 91 aa-0.94□□□□□ -2.56
PMS1-203ENST00000409593 MMP24-AS1A0A0U1RRL7 71 aa-0.94□□□□□ -2.56
PMS1-203ENST00000409593 CORTO00230 105 aa-0.94□□□□□ -2.56
PMS1-203ENST00000409593 CYB5AP00167 134 aa-0.94□□□□□ -2.56
PMS1-203ENST00000409593 PLGLAQ15195 96 aa-0.94□□□□□ -2.56
PMS1-203ENST00000409593 MT1MQ8N339 61 aa-0.94□□□□□ -2.56
PMS1-203ENST00000409593 ZC3H13Q5T200 1668 aaKnown RBP-0.94□□□□□ -2.56
PMS1-203ENST00000409593 CFAP46Q8IYW2 2715 aa-0.94□□□□□ -2.56
PMS1-203ENST00000409593 KIAA0586Q9BVV6 1533 aa-0.94□□□□□ -2.56
PMS1-203ENST00000409593 TRAV21A0A0B4J279 112 aa-0.94□□□□□ -2.56
PMS1-203ENST00000409593 MT2AP02795 61 aa-0.94□□□□□ -2.56
PMS1-203ENST00000409593 HMGN1P05114 100 aa-0.94□□□□□ -2.56
PMS1-203ENST00000409593 S100A1P23297 94 aa-0.94□□□□□ -2.56
PMS1-203ENST00000409593 GTF2H5Q6ZYL4 71 aa-0.94□□□□□ -2.56
PMS1-203ENST00000409593 WFDC9Q8NEX5 89 aa-0.94□□□□□ -2.56
PMS1-203ENST00000409593 TMEM203Q969S6 136 aa-0.94□□□□□ -2.56
PMS1-203ENST00000409593 LY75O60449 1722 aa-0.95□□□□□ -2.56
PMS1-203ENST00000409593 CCDC88BA6NC98 1476 aa-0.95□□□□□ -2.56
PMS1-203ENST00000409593 ATP10BO94823 1461 aa-0.95□□□□□ -2.56
PMS1-203ENST00000409593 TMEM131LA2VDJ0 1609 aa-0.95□□□□□ -2.56
PMS1-203ENST00000409593 A0A1B0GV90 55 aa-0.95□□□□□ -2.56
PMS1-203ENST00000409593 DLEU1O43261 78 aa-0.95□□□□□ -2.56
PMS1-203ENST00000409593 RPL13AP3Q6NVV1 102 aa-0.95□□□□□ -2.56
PMS1-203ENST00000409593 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.95□□□□□ -2.56
PMS1-203ENST00000409593 CSMD1Q96PZ7 3565 aa-0.95□□□□□ -2.56
PMS1-203ENST00000409593 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.95□□□□□ -2.56
PMS1-203ENST00000409593 KIF1AQ12756 1690 aa-0.96□□□□□ -2.56
PMS1-203ENST00000409593 PLCH1Q4KWH8 1693 aa-0.96□□□□□ -2.56
PMS1-203ENST00000409593 MYH4Q9Y623 1939 aa-0.96□□□□□ -2.56
PMS1-203ENST00000409593 MT-ATP8P03928 68 aa-0.96□□□□□ -2.56
PMS1-203ENST00000409593 HMGN2P05204 90 aaKnown RBP-0.96□□□□□ -2.56
PMS1-203ENST00000409593 MRPS10P82664 201 aaKnown RBP-0.96□□□□□ -2.56
PMS1-203ENST00000409593 IGLV5-48A0A075B6I7 105 aa-0.97□□□□□ -2.56
PMS1-203ENST00000409593 COL5A1-AS1Q5SY13 56 aa-0.97□□□□□ -2.56
PMS1-203ENST00000409593 CCNB3Q8WWL7 1395 aa-0.97□□□□□ -2.56
PMS1-203ENST00000409593 ARFGEF2Q9Y6D5 1785 aa-0.97□□□□□ -2.56
PMS1-203ENST00000409593 SPTAN1Q13813 2472 aaKnown RBP-0.97□□□□□ -2.56
PMS1-203ENST00000409593 LRBAP50851 2863 aa-0.97□□□□□ -2.56
PMS1-203ENST00000409593 LRRIQ1Q96JM4 1722 aa-0.97□□□□□ -2.57
PMS1-203ENST00000409593 MAST1Q9Y2H9 1570 aa-0.97□□□□□ -2.57
PMS1-203ENST00000409593 NEXMIFQ5QGS0 1516 aa-0.97□□□□□ -2.57
PMS1-203ENST00000409593 NCOA2Q15596 1464 aa-0.97□□□□□ -2.57
PMS1-203ENST00000409593 ACYP1P07311 99 aa-0.97□□□□□ -2.57
PMS1-203ENST00000409593 GNG8Q9UK08 70 aa-0.97□□□□□ -2.57
PMS1-203ENST00000409593 SRCAPQ6ZRS2 3230 aa-0.98□□□□□ -2.57
PMS1-203ENST00000409593 RNF17Q9BXT8 1623 aaKnown RBP-0.98□□□□□ -2.57
PMS1-203ENST00000409593 URB2Q14146 1524 aaKnown RBP-0.98□□□□□ -2.57
PMS1-203ENST00000409593 CEP162Q5TB80 1403 aa-0.98□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms