RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 COX8AP10176 69 aa10.72□□□□□ -0.69
SMARCB1-204ENST00000407422 HRCT1Q6UXD1 115 aa10.71□□□□□ -0.69
SMARCB1-204ENST00000407422 IFITM1P13164 125 aa10.7□□□□□ -0.7
SMARCB1-204ENST00000407422 MUSTN1Q8IVN3 82 aa10.7□□□□□ -0.7
SMARCB1-204ENST00000407422 DEFB105AQ8NG35 78 aa10.7□□□□□ -0.7
SMARCB1-204ENST00000407422 LAMTOR3Q9UHA4 124 aa10.69□□□□□ -0.7
SMARCB1-204ENST00000407422 C2orf91Q6ZV80 131 aa10.69□□□□□ -0.7
SMARCB1-204ENST00000407422 COPS9Q8WXC6 57 aa10.69□□□□□ -0.7
SMARCB1-204ENST00000407422 KRTAP4-1Q9BYQ7 146 aa10.69□□□□□ -0.7
SMARCB1-204ENST00000407422 TAL2Q16559 108 aa10.68□□□□□ -0.7
SMARCB1-204ENST00000407422 Q1RN00 199 aa10.68□□□□□ -0.7
SMARCB1-204ENST00000407422 TRBV7-6A0A0J9YX20 115 aa10.67□□□□□ -0.7
SMARCB1-204ENST00000407422 A0A1W2PPM0 123 aa10.67□□□□□ -0.7
SMARCB1-204ENST00000407422 SPCS1Q9Y6A9 102 aa10.66□□□□□ -0.7
SMARCB1-204ENST00000407422 SEC61BP60468 96 aaKnown RBP10.66□□□□□ -0.7
SMARCB1-204ENST00000407422 TEX49A0A1B0GTD5 131 aa10.65□□□□□ -0.7
SMARCB1-204ENST00000407422 FABP2P12104 132 aa10.65□□□□□ -0.7
SMARCB1-204ENST00000407422 A0A1B0GWB2 263 aa10.64□□□□□ -0.71
SMARCB1-204ENST00000407422 H3BUT2 72 aa10.64□□□□□ -0.71
SMARCB1-204ENST00000407422 XP32Q5T750 250 aa10.64□□□□□ -0.71
SMARCB1-204ENST00000407422 SMIM29Q86T20 159 aa10.63□□□□□ -0.71
SMARCB1-204ENST00000407422 LIMD2Q9BT23 127 aa10.63□□□□□ -0.71
SMARCB1-204ENST00000407422 LINC01547P58512 204 aaPredicted RBP10.62□□□□□ -0.71
SMARCB1-204ENST00000407422 F8W1H4 67 aa10.62□□□□□ -0.71
SMARCB1-204ENST00000407422 SMIM11BQ8TCY0 68 aa10.61□□□□□ -0.71
SMARCB1-204ENST00000407422 IGLV5-48A0A075B6I7 105 aa10.6□□□□□ -0.71
SMARCB1-204ENST00000407422 TRAV13-2A0A0B4J235 113 aa10.59□□□□□ -0.71
SMARCB1-204ENST00000407422 KRTAP9-2Q9BYQ4 174 aa10.59□□□□□ -0.71
SMARCB1-204ENST00000407422 A0A0G2JQZ4 141 aa10.58□□□□□ -0.72
SMARCB1-204ENST00000407422 H7C2G1 150 aa10.58□□□□□ -0.72
SMARCB1-204ENST00000407422 CD164Q04900 197 aa10.58□□□□□ -0.72
SMARCB1-204ENST00000407422 A4D1N5 150 aa10.56□□□□□ -0.72
SMARCB1-204ENST00000407422 C9orf92A6NGG3 77 aa10.55□□□□□ -0.72
SMARCB1-204ENST00000407422 HIGD1BQ9P298 99 aa10.55□□□□□ -0.72
SMARCB1-204ENST00000407422 NHP2Q9NX24 153 aaKnown RBP10.52□□□□□ -0.73
SMARCB1-204ENST00000407422 Q5XG85 94 aa10.5□□□□□ -0.73
SMARCB1-204ENST00000407422 C1orf195Q5TG92 126 aa10.48□□□□□ -0.73
SMARCB1-204ENST00000407422 LINC00575Q6W349 94 aa10.48□□□□□ -0.73
SMARCB1-204ENST00000407422 RAB37Q96AX2 223 aa10.47□□□□□ -0.73
SMARCB1-204ENST00000407422 PCOTHQ58A44 107 aa10.47□□□□□ -0.73
SMARCB1-204ENST00000407422 NAA38Q9BRA0 125 aaKnown RBP10.45□□□□□ -0.74
SMARCB1-204ENST00000407422 Q6ZQY7 126 aa10.44□□□□□ -0.74
SMARCB1-204ENST00000407422 PRO0461Q9UI25 63 aa10.44□□□□□ -0.74
SMARCB1-204ENST00000407422 hADV29S1A0JD25 119 aa10.43□□□□□ -0.74
SMARCB1-204ENST00000407422 IGLV8-61A0A075B6I0 122 aa10.41□□□□□ -0.74
SMARCB1-204ENST00000407422 F8WEM9 126 aa10.41□□□□□ -0.74
SMARCB1-204ENST00000407422 H3BMG7 143 aa10.41□□□□□ -0.74
SMARCB1-204ENST00000407422 HIST1H4GQ99525 98 aa10.41□□□□□ -0.74
SMARCB1-204ENST00000407422 SS18L2Q9UHA2 77 aa10.41□□□□□ -0.74
SMARCB1-204ENST00000407422 ETDBQ3ZM63 59 aa10.4□□□□□ -0.74
SMARCB1-204ENST00000407422 LCE2CQ5TA81 110 aa10.4□□□□□ -0.74
SMARCB1-204ENST00000407422 ANAPC13Q9BS18 74 aa10.4□□□□□ -0.75
SMARCB1-204ENST00000407422 FXYD2P54710 66 aa10.39□□□□□ -0.75
SMARCB1-204ENST00000407422 KRTAP19-2Q3LHN2 52 aa10.39□□□□□ -0.75
SMARCB1-204ENST00000407422 CEND1Q8N111 149 aa10.39□□□□□ -0.75
SMARCB1-204ENST00000407422 TCL1BO95988 128 aa10.37□□□□□ -0.75
SMARCB1-204ENST00000407422 IGFL1Q6UW32 110 aa10.36□□□□□ -0.75
SMARCB1-204ENST00000407422 MT-ATP8P03928 68 aa10.35□□□□□ -0.75
SMARCB1-204ENST00000407422 Q6JHZ5 121 aa10.34□□□□□ -0.75
SMARCB1-204ENST00000407422 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.34□□□□□ -0.75
SMARCB1-204ENST00000407422 PPDPFLQ8WWR9 84 aa10.34□□□□□ -0.75
SMARCB1-204ENST00000407422 CLEC2BQ92478 149 aa10.34□□□□□ -0.75
SMARCB1-204ENST00000407422 Q6Q795 121 aa10.33□□□□□ -0.76
SMARCB1-204ENST00000407422 TRBV7-7A0A0K0K1E9 115 aa10.32□□□□□ -0.76
SMARCB1-204ENST00000407422 CFC1BP0CG36 223 aa10.32□□□□□ -0.76
SMARCB1-204ENST00000407422 CFC1P0CG37 223 aa10.32□□□□□ -0.76
SMARCB1-204ENST00000407422 K7ERJ3 54 aa10.31□□□□□ -0.76
SMARCB1-204ENST00000407422 RPL37P61927 97 aaKnown RBP10.31□□□□□ -0.76
SMARCB1-204ENST00000407422 LYRM7Q5U5X0 104 aa10.31□□□□□ -0.76
SMARCB1-204ENST00000407422 TEN1Q86WV5 123 aa10.28□□□□□ -0.76
SMARCB1-204ENST00000407422 MT1HP80294 61 aa10.27□□□□□ -0.77
SMARCB1-204ENST00000407422 SMIM20Q8N5G0 67 aa10.27□□□□□ -0.77
SMARCB1-204ENST00000407422 SMCPP49901 116 aaPredicted RBP10.25□□□□□ -0.77
SMARCB1-204ENST00000407422 NDUFV3P56181 108 aaKnown RBP10.25□□□□□ -0.77
SMARCB1-204ENST00000407422 KRTAP9-6A0A140TA67 174 aa10.24□□□□□ -0.77
SMARCB1-204ENST00000407422 FAM218AQ96MZ4 157 aa10.24□□□□□ -0.77
SMARCB1-204ENST00000407422 TRBV20-1A0A075B6N2 111 aa10.23□□□□□ -0.77
SMARCB1-204ENST00000407422 A0A0B4J2C4 111 aa10.23□□□□□ -0.77
SMARCB1-204ENST00000407422 H0YGX0 51 aa10.2□□□□□ -0.78
SMARCB1-204ENST00000407422 LCE2DQ5TA82 110 aaPredicted RBP10.2□□□□□ -0.78
SMARCB1-204ENST00000407422 OBSCN-AS1Q96MR7 158 aa10.19□□□□□ -0.78
SMARCB1-204ENST00000407422 SNCGO76070 127 aa10.18□□□□□ -0.78
SMARCB1-204ENST00000407422 C5orf47Q569G3 176 aa10.18□□□□□ -0.78
SMARCB1-204ENST00000407422 FSIP2Q5CZC0 6907 aa10.18□□□□□ -0.78
SMARCB1-204ENST00000407422 CCDC179H3BU77 68 aa10.18□□□□□ -0.78
SMARCB1-204ENST00000407422 FLGP20930 4061 aaPredicted RBP10.18□□□□□ -0.78
SMARCB1-204ENST00000407422 LST1O00453 97 aa10.17□□□□□ -0.78
SMARCB1-204ENST00000407422 PRO1854Q9UHT4 67 aa10.15□□□□□ -0.78
SMARCB1-204ENST00000407422 PSMB2P49721 201 aa10.13□□□□□ -0.79
SMARCB1-204ENST00000407422 SCGB1C2P0DMR2 95 aa10.12□□□□□ -0.79
SMARCB1-204ENST00000407422 Q75L30 129 aa10.11□□□□□ -0.79
SMARCB1-204ENST00000407422 ANKRD29Q8N6D5 301 aa10.11□□□□□ -0.79
SMARCB1-204ENST00000407422 COX6B2Q6YFQ2 88 aa10.11□□□□□ -0.79
SMARCB1-204ENST00000407422 TRIAP1O43715 76 aa10.1□□□□□ -0.79
SMARCB1-204ENST00000407422 A0A087WSZ3 146 aa10.09□□□□□ -0.79
SMARCB1-204ENST00000407422 A0A1B0GX51 115 aa10.09□□□□□ -0.79
SMARCB1-204ENST00000407422 LORP23490 312 aaPredicted RBP10.08□□□□□ -0.8
SMARCB1-204ENST00000407422 ATP11AUNQ6ZP68 121 aa10.08□□□□□ -0.8
SMARCB1-204ENST00000407422 Q96NJ1 140 aa10.08□□□□□ -0.8
SMARCB1-204ENST00000407422 KRTAP10-6P60371 365 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms