RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 KRTAP1-3Q8IUG1 177 aa9.04□□□□□ -0.96
HMGA2-204ENST00000403681 COA5Q86WW8 74 aa9.03□□□□□ -0.96
HMGA2-204ENST00000403681 CYP4F30PQ9H0H9 118 aa9.02□□□□□ -0.97
HMGA2-204ENST00000403681 A8MWP4 228 aa9.02□□□□□ -0.97
HMGA2-204ENST00000403681 DNAH10OSP0CZ25 163 aa9.01□□□□□ -0.97
HMGA2-204ENST00000403681 MGAM2Q2M2H8 2515 aa9.01□□□□□ -0.97
HMGA2-204ENST00000403681 PLA2G1BP04054 148 aaKnown RBP9.01□□□□□ -0.97
HMGA2-204ENST00000403681 TP53AIP1Q9HCN2 124 aa9.01□□□□□ -0.97
HMGA2-204ENST00000403681 SPRR4Q96PI1 79 aa9□□□□□ -0.97
HMGA2-204ENST00000403681 PLA2G2DQ9UNK4 145 aa9□□□□□ -0.97
HMGA2-204ENST00000403681 CD164Q04900 197 aa9□□□□□ -0.97
HMGA2-204ENST00000403681 TLX1NBP0CAT3 122 aa8.99□□□□□ -0.97
HMGA2-204ENST00000403681 LINC00588Q9Y4M8 146 aa8.99□□□□□ -0.97
HMGA2-204ENST00000403681 C16orf90A8MZG2 172 aa8.98□□□□□ -0.97
HMGA2-204ENST00000403681 PHF5AQ7RTV0 110 aaKnown RBP8.97□□□□□ -0.97
HMGA2-204ENST00000403681 CUBNO60494 3623 aa8.97□□□□□ -0.97
HMGA2-204ENST00000403681 CSMD2Q7Z408 3487 aa8.96□□□□□ -0.97
HMGA2-204ENST00000403681 SPANXA2-OT1Q8N9U9 137 aa8.96□□□□□ -0.98
HMGA2-204ENST00000403681 ATP11AUNQ6ZP68 121 aa8.95□□□□□ -0.98
HMGA2-204ENST00000403681 LOC101927531A0A1B0GV80 90 aa8.95□□□□□ -0.98
HMGA2-204ENST00000403681 CASC10Q5T4H9 136 aa8.93□□□□□ -0.98
HMGA2-204ENST00000403681 KRTAP1-1Q07627 177 aa8.93□□□□□ -0.98
HMGA2-204ENST00000403681 KTN1-AS1Q86SY8 53 aa8.93□□□□□ -0.98
HMGA2-204ENST00000403681 CHTF8P0CG12 524 aa8.92□□□□□ -0.98
HMGA2-204ENST00000403681 IGLV5-37A0A075B6J1 123 aa8.9□□□□□ -0.98
HMGA2-204ENST00000403681 MOBPQ13875 183 aa8.88□□□□□ -0.99
HMGA2-204ENST00000403681 NOTCH1P46531 2555 aa8.88□□□□□ -0.99
HMGA2-204ENST00000403681 Q8N9P0 234 aaPredicted RBP8.88□□□□□ -0.99
HMGA2-204ENST00000403681 STAB1Q9NY15 2570 aa8.88□□□□□ -0.99
HMGA2-204ENST00000403681 CIRBP-AS1Q8TBR5 109 aa8.87□□□□□ -0.99
HMGA2-204ENST00000403681 SPRR1AP35321 89 aa8.86□□□□□ -0.99
HMGA2-204ENST00000403681 KRTAP26-1Q6PEX3 210 aa8.86□□□□□ -0.99
HMGA2-204ENST00000403681 MDFIQ99750 246 aa8.86□□□□□ -0.99
HMGA2-204ENST00000403681 RETNLBQ9BQ08 111 aa8.86□□□□□ -0.99
HMGA2-204ENST00000403681 Q5VV11 94 aa8.85□□□□□ -0.99
HMGA2-204ENST00000403681 ACYP2P14621 99 aa8.84□□□□□ -0.99
HMGA2-204ENST00000403681 COL6A5A8TX70 2615 aa8.84□□□□□ -0.99
HMGA2-204ENST00000403681 TNP2Q05952 138 aa8.83□□□□□ -1
HMGA2-204ENST00000403681 KRTAP24-1Q3LI83 254 aa8.83□□□□□ -1
HMGA2-204ENST00000403681 C8orf17Q9NRJ1 99 aa8.83□□□□□ -1
HMGA2-204ENST00000403681 A0A1B0GU69 56 aa8.82□□□□□ -1
HMGA2-204ENST00000403681 ZCCHC13Q8WW36 166 aaKnown RBP8.82□□□□□ -1
HMGA2-204ENST00000403681 KRTAP10-11P60412 298 aa8.82□□□□□ -1
HMGA2-204ENST00000403681 TENM4Q6N022 2769 aa8.82□□□□□ -1
HMGA2-204ENST00000403681 COX6B2Q6YFQ2 88 aa8.82□□□□□ -1
HMGA2-204ENST00000403681 MRPL34Q9BQ48 92 aaKnown RBP8.82□□□□□ -1
HMGA2-204ENST00000403681 CDC42SE1Q9NRR8 79 aa8.82□□□□□ -1
HMGA2-204ENST00000403681 NIPBLQ6KC79 2804 aaeCLIP8.81□□□□□ -1
HMGA2-204ENST00000403681 HIVEP1P15822 2718 aa8.81□□□□□ -1
HMGA2-204ENST00000403681 C7orf65Q6ZTY9 151 aa8.81□□□□□ -1
HMGA2-204ENST00000403681 VPS13CQ709C8 3753 aa8.81□□□□□ -1
HMGA2-204ENST00000403681 CNBPP62633 177 aaKnown RBP8.8□□□□□ -1
HMGA2-204ENST00000403681 IGLV7-46A0A075B6I9 117 aa8.78□□□□□ -1
HMGA2-204ENST00000403681 BAHCC1Q9P281 2608 aa8.78□□□□□ -1
HMGA2-204ENST00000403681 Q75L30 129 aa8.78□□□□□ -1
HMGA2-204ENST00000403681 NSD1Q96L73 2696 aaPredicted RBP8.78□□□□□ -1
HMGA2-204ENST00000403681 NBEAL1Q6ZS30 2694 aa8.77□□□□□ -1
HMGA2-204ENST00000403681 RBM12B-AS1Q9P1G2 102 aa8.76□□□□□ -1.01
HMGA2-204ENST00000403681 A0A1B0GVX0 72 aa8.75□□□□□ -1.01
HMGA2-204ENST00000403681 KRTAP4-16G5E9R7 235 aaPredicted RBP8.75□□□□□ -1.01
HMGA2-204ENST00000403681 LCE6AA0A183 80 aa8.74□□□□□ -1.01
HMGA2-204ENST00000403681 SPINK1P00995 79 aa8.72□□□□□ -1.01
HMGA2-204ENST00000403681 LCA10Q71F78 164 aa8.72□□□□□ -1.01
HMGA2-204ENST00000403681 C8orf87E5RJ46 101 aa8.71□□□□□ -1.01
HMGA2-204ENST00000403681 PRR26Q8N8Z3 221 aa8.71□□□□□ -1.01
HMGA2-204ENST00000403681 NBPF19A0A087WUL8 3843 aa8.71□□□□□ -1.01
HMGA2-204ENST00000403681 MMP24-AS1A0A0U1RRL7 71 aa8.7□□□□□ -1.02
HMGA2-204ENST00000403681 IGLV8-61A0A075B6I0 122 aa8.7□□□□□ -1.02
HMGA2-204ENST00000403681 IGKV2D-30A0A075B6S6 120 aa8.7□□□□□ -1.02
HMGA2-204ENST00000403681 IGKV2-30P06310 120 aa8.7□□□□□ -1.02
HMGA2-204ENST00000403681 LINC00472Q9H8W2 130 aa8.7□□□□□ -1.02
HMGA2-204ENST00000403681 ZFHX3Q15911 3703 aa8.69□□□□□ -1.02
HMGA2-204ENST00000403681 LINC01558Q9Y6Z2 57 aa8.68□□□□□ -1.02
HMGA2-204ENST00000403681 C9orf163Q8N9P6 203 aa8.68□□□□□ -1.02
HMGA2-204ENST00000403681 KRTAP29-1A8MX34 341 aaPredicted RBP8.67□□□□□ -1.02
HMGA2-204ENST00000403681 NBDYA0A0U1RRE5 68 aa8.67□□□□□ -1.02
HMGA2-204ENST00000403681 ANAPC11Q9NYG5 84 aa8.65□□□□□ -1.03
HMGA2-204ENST00000403681 LINC00313P59037 77 aa8.64□□□□□ -1.03
HMGA2-204ENST00000403681 TYMSOSQ8TAI1 123 aa8.64□□□□□ -1.03
HMGA2-204ENST00000403681 A8MU10 97 aa8.63□□□□□ -1.03
HMGA2-204ENST00000403681 UQCR11O14957 56 aa8.63□□□□□ -1.03
HMGA2-204ENST00000403681 OTOGQ6ZRI0 2925 aa8.62□□□□□ -1.03
HMGA2-204ENST00000403681 SPINK7P58062 85 aa8.61□□□□□ -1.03
HMGA2-204ENST00000403681 HRES1P13985 223 aa8.61□□□□□ -1.03
HMGA2-204ENST00000403681 PDZD2O15018 2839 aa8.61□□□□□ -1.03
HMGA2-204ENST00000403681 SPRR1BP22528 89 aa8.61□□□□□ -1.03
HMGA2-204ENST00000403681 MIR22HGQ0VDD5 57 aa8.6□□□□□ -1.03
HMGA2-204ENST00000403681 TENM1Q9UKZ4 2725 aa8.6□□□□□ -1.03
HMGA2-204ENST00000403681 VWFP04275 2813 aa8.6□□□□□ -1.03
HMGA2-204ENST00000403681 SPACA4Q8TDM5 124 aa8.59□□□□□ -1.03
HMGA2-204ENST00000403681 RTL8CO15255 209 aa8.58□□□□□ -1.04
HMGA2-204ENST00000403681 KRTAP7-1Q8IUC3 87 aa8.57□□□□□ -1.04
HMGA2-204ENST00000403681 FLG2Q5D862 2391 aaPredicted RBP8.56□□□□□ -1.04
HMGA2-204ENST00000403681 K7EIL1 84 aa8.56□□□□□ -1.04
HMGA2-204ENST00000403681 ZNF861PO60384 105 aa8.56□□□□□ -1.04
HMGA2-204ENST00000403681 PRAC1Q96KF2 57 aa8.53□□□□□ -1.04
HMGA2-204ENST00000403681 KMT2BQ9UMN6 2715 aaPredicted RBP8.53□□□□□ -1.04
HMGA2-204ENST00000403681 PSORS1C2Q9UIG4 136 aa8.53□□□□□ -1.04
HMGA2-204ENST00000403681 KRTAP1-5Q9BYS1 174 aa8.48□□□□□ -1.05
HMGA2-204ENST00000403681 ZNF469Q96JG9 3925 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 224.8 ms