RNA–Protein interactions for RNA: ENST00000402685.6

PDZRN4-202, Transcript of PDZ domain containing ring finger 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PDZRN4, Length 3,347 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-202ENST00000402685 IGFL1Q6UW32 110 aa13.25□□□□□ -0.29
PDZRN4-202ENST00000402685 INAFM1C9JVW0 142 aa13.24□□□□□ -0.29
PDZRN4-202ENST00000402685 TNP2Q05952 138 aa13.23□□□□□ -0.29
PDZRN4-202ENST00000402685 PCOTHQ58A44 107 aa13.23□□□□□ -0.29
PDZRN4-202ENST00000402685 H0Y9P7 68 aa13.23□□□□□ -0.29
PDZRN4-202ENST00000402685 TENM2Q9NT68 2774 aa13.23□□□□□ -0.29
PDZRN4-202ENST00000402685 DEFB131BA0A096LNP1 70 aa13.23□□□□□ -0.29
PDZRN4-202ENST00000402685 MRPL55Q7Z7F7 128 aaKnown RBP13.23□□□□□ -0.29
PDZRN4-202ENST00000402685 Q5VV11 94 aa13.22□□□□□ -0.29
PDZRN4-202ENST00000402685 H0Y9J4 135 aa13.19□□□□□ -0.3
PDZRN4-202ENST00000402685 SPRR4Q96PI1 79 aa13.19□□□□□ -0.3
PDZRN4-202ENST00000402685 ANK2Q01484 3957 aa13.19□□□□□ -0.3
PDZRN4-202ENST00000402685 LCE6AA0A183 80 aa13.18□□□□□ -0.3
PDZRN4-202ENST00000402685 A6NED7 52 aa13.18□□□□□ -0.3
PDZRN4-202ENST00000402685 KRTAP4-16G5E9R7 235 aaPredicted RBP13.18□□□□□ -0.3
PDZRN4-202ENST00000402685 CASC2Q6XLA1 102 aa13.16□□□□□ -0.3
PDZRN4-202ENST00000402685 MGAM2Q2M2H8 2515 aa13.16□□□□□ -0.3
PDZRN4-202ENST00000402685 REG3GQ6UW15 175 aa13.16□□□□□ -0.3
PDZRN4-202ENST00000402685 C16orf90A8MZG2 172 aa13.13□□□□□ -0.31
PDZRN4-202ENST00000402685 UBE2AP49459 152 aa13.13□□□□□ -0.31
PDZRN4-202ENST00000402685 NDUFB1O75438 58 aa13.12□□□□□ -0.31
PDZRN4-202ENST00000402685 Q8N9P0 234 aaPredicted RBP13.11□□□□□ -0.31
PDZRN4-202ENST00000402685 CYP4F30PQ9H0H9 118 aa13.11□□□□□ -0.31
PDZRN4-202ENST00000402685 LINC01556Q5JQF7 62 aa13.11□□□□□ -0.31
PDZRN4-202ENST00000402685 SPAG11AQ6PDA7 123 aa13.1□□□□□ -0.31
PDZRN4-202ENST00000402685 C11orf45Q8TAV5 145 aa13.1□□□□□ -0.31
PDZRN4-202ENST00000402685 STAB2Q8WWQ8 2551 aa13.08□□□□□ -0.32
PDZRN4-202ENST00000402685 CHTF8P0CG12 524 aa13.06□□□□□ -0.32
PDZRN4-202ENST00000402685 SPRR1AP35321 89 aa13.06□□□□□ -0.32
PDZRN4-202ENST00000402685 NDUFS5O43920 106 aa13.04□□□□□ -0.32
PDZRN4-202ENST00000402685 LCA10Q71F78 164 aa13.04□□□□□ -0.32
PDZRN4-202ENST00000402685 KRTAP10-11P60412 298 aa13.03□□□□□ -0.32
PDZRN4-202ENST00000402685 CNBPP62633 177 aaKnown RBP13.03□□□□□ -0.32
PDZRN4-202ENST00000402685 DNAH10Q8IVF4 4471 aa13.03□□□□□ -0.32
PDZRN4-202ENST00000402685 COA5Q86WW8 74 aa13.02□□□□□ -0.32
PDZRN4-202ENST00000402685 LINC00588Q9Y4M8 146 aa13.02□□□□□ -0.33
PDZRN4-202ENST00000402685 PHF5AQ7RTV0 110 aaKnown RBP12.99□□□□□ -0.33
PDZRN4-202ENST00000402685 A0A1B0GW54 56 aa12.98□□□□□ -0.33
PDZRN4-202ENST00000402685 KRTAP11-1Q8IUC1 163 aa12.97□□□□□ -0.33
PDZRN4-202ENST00000402685 LYSTQ99698 3801 aa12.97□□□□□ -0.33
PDZRN4-202ENST00000402685 KRTAP29-1A8MX34 341 aaPredicted RBP12.95□□□□□ -0.34
PDZRN4-202ENST00000402685 LIMD2Q9BT23 127 aa12.95□□□□□ -0.34
PDZRN4-202ENST00000402685 RBM12B-AS1Q9P1G2 102 aa12.95□□□□□ -0.34
PDZRN4-202ENST00000402685 IGLV9-49A0A0B4J1Y8 123 aa12.94□□□□□ -0.34
PDZRN4-202ENST00000402685 TLX1NBP0CAT3 122 aa12.93□□□□□ -0.34
PDZRN4-202ENST00000402685 DNAH10OSP0CZ25 163 aa12.91□□□□□ -0.34
PDZRN4-202ENST00000402685 CD164Q04900 197 aa12.91□□□□□ -0.34
PDZRN4-202ENST00000402685 H3BNG1 76 aa12.9□□□□□ -0.34
PDZRN4-202ENST00000402685 PLA2G2DQ9UNK4 145 aa12.89□□□□□ -0.35
PDZRN4-202ENST00000402685 A8MWP4 228 aa12.88□□□□□ -0.35
PDZRN4-202ENST00000402685 KTN1-AS1Q86SY8 53 aa12.88□□□□□ -0.35
PDZRN4-202ENST00000402685 IGLV5-37A0A075B6J1 123 aa12.86□□□□□ -0.35
PDZRN4-202ENST00000402685 IGHV6-1A0A0B4J1U7 121 aa12.86□□□□□ -0.35
PDZRN4-202ENST00000402685 SPINK7P58062 85 aa12.85□□□□□ -0.35
PDZRN4-202ENST00000402685 C9orf163Q8N9P6 203 aa12.83□□□□□ -0.36
PDZRN4-202ENST00000402685 SPANXA2-OT1Q8N9U9 137 aa12.82□□□□□ -0.36
PDZRN4-202ENST00000402685 LINC00472Q9H8W2 130 aa12.82□□□□□ -0.36
PDZRN4-202ENST00000402685 ANAPC11Q9NYG5 84 aa12.8□□□□□ -0.36
PDZRN4-202ENST00000402685 MMP24-AS1A0A0U1RRL7 71 aa12.8□□□□□ -0.36
PDZRN4-202ENST00000402685 LOC101927531A0A1B0GV80 90 aa12.8□□□□□ -0.36
PDZRN4-202ENST00000402685 K7EIL1 84 aa12.79□□□□□ -0.36
PDZRN4-202ENST00000402685 PRR26Q8N8Z3 221 aa12.78□□□□□ -0.36
PDZRN4-202ENST00000402685 KRTAP1-5Q9BYS1 174 aa12.78□□□□□ -0.36
PDZRN4-202ENST00000402685 ATP11AUNQ6ZP68 121 aa12.78□□□□□ -0.36
PDZRN4-202ENST00000402685 SPINK6Q6UWN8 80 aa12.76□□□□□ -0.37
PDZRN4-202ENST00000402685 Q75L30 129 aa12.76□□□□□ -0.37
PDZRN4-202ENST00000402685 MOBPQ13875 183 aa12.75□□□□□ -0.37
PDZRN4-202ENST00000402685 PRAC1Q96KF2 57 aa12.74□□□□□ -0.37
PDZRN4-202ENST00000402685 IGLV7-46A0A075B6I9 117 aa12.74□□□□□ -0.37
PDZRN4-202ENST00000402685 A0A087X002 238 aa12.71□□□□□ -0.37
PDZRN4-202ENST00000402685 NOTCH2NLQ7Z3S9 236 aa12.71□□□□□ -0.37
PDZRN4-202ENST00000402685 RETNLBQ9BQ08 111 aa12.71□□□□□ -0.37
PDZRN4-202ENST00000402685 A6NN06 94 aa12.71□□□□□ -0.38
PDZRN4-202ENST00000402685 HRES1P13985 223 aa12.69□□□□□ -0.38
PDZRN4-202ENST00000402685 CDC42SE1Q9NRR8 79 aa12.69□□□□□ -0.38
PDZRN4-202ENST00000402685 H3BPC8 53 aa12.69□□□□□ -0.38
PDZRN4-202ENST00000402685 PANO1I0J062 215 aa12.68□□□□□ -0.38
PDZRN4-202ENST00000402685 IGLV8-61A0A075B6I0 122 aa12.68□□□□□ -0.38
PDZRN4-202ENST00000402685 UBE2DNLQ8IWF7 75 aa12.67□□□□□ -0.38
PDZRN4-202ENST00000402685 CDK2AP2O75956 126 aa12.65□□□□□ -0.38
PDZRN4-202ENST00000402685 ADM2Q7Z4H4 148 aa12.65□□□□□ -0.38
PDZRN4-202ENST00000402685 C8orf17Q9NRJ1 99 aa12.63□□□□□ -0.39
PDZRN4-202ENST00000402685 DNAH9Q9NYC9 4486 aa12.6□□□□□ -0.39
PDZRN4-202ENST00000402685 C7orf65Q6ZTY9 151 aa12.59□□□□□ -0.39
PDZRN4-202ENST00000402685 LINC01558Q9Y6Z2 57 aa12.58□□□□□ -0.4
PDZRN4-202ENST00000402685 Q96NJ1 140 aa12.54□□□□□ -0.4
PDZRN4-202ENST00000402685 KRTAP24-1Q3LI83 254 aa12.53□□□□□ -0.4
PDZRN4-202ENST00000402685 DNAH1Q9P2D7 4330 aa12.52□□□□□ -0.4
PDZRN4-202ENST00000402685 LINC00313P59037 77 aa12.51□□□□□ -0.41
PDZRN4-202ENST00000402685 Q5W150 140 aa12.51□□□□□ -0.41
PDZRN4-202ENST00000402685 MRPL34Q9BQ48 92 aaKnown RBP12.49□□□□□ -0.41
PDZRN4-202ENST00000402685 TP53AIP1Q9HCN2 124 aa12.48□□□□□ -0.41
PDZRN4-202ENST00000402685 A0A1B0GVX0 72 aa12.48□□□□□ -0.41
PDZRN4-202ENST00000402685 SPRR1BP22528 89 aa12.45□□□□□ -0.42
PDZRN4-202ENST00000402685 FRAS1Q86XX4 4008 aa12.45□□□□□ -0.42
PDZRN4-202ENST00000402685 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.45□□□□□ -0.42
PDZRN4-202ENST00000402685 HUWE1Q7Z6Z7 4374 aaKnown RBP12.44□□□□□ -0.42
PDZRN4-202ENST00000402685 TGP01266 2768 aa12.44□□□□□ -0.42
PDZRN4-202ENST00000402685 MDFIQ99750 246 aa12.43□□□□□ -0.42
PDZRN4-202ENST00000402685 DNAH7Q8WXX0 4024 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms