RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 UBE2DNLQ8IWF7 75 aa5.83□□□□□ -1.48
HPS4-203ENST00000402105 A8MUN3 132 aa5.82□□□□□ -1.48
HPS4-203ENST00000402105 PHF5AQ7RTV0 110 aaKnown RBP5.82□□□□□ -1.48
HPS4-203ENST00000402105 TENM2Q9NT68 2774 aa5.82□□□□□ -1.48
HPS4-203ENST00000402105 KRTAP4-16G5E9R7 235 aaPredicted RBP5.81□□□□□ -1.48
HPS4-203ENST00000402105 TNP2Q05952 138 aa5.81□□□□□ -1.48
HPS4-203ENST00000402105 CASC2Q6XLA1 102 aa5.81□□□□□ -1.48
HPS4-203ENST00000402105 V9GYY9 64 aa5.81□□□□□ -1.48
HPS4-203ENST00000402105 STAB2Q8WWQ8 2551 aa5.8□□□□□ -1.48
HPS4-203ENST00000402105 H0Y9P7 68 aa5.8□□□□□ -1.48
HPS4-203ENST00000402105 NDUFS5O43920 106 aa5.8□□□□□ -1.48
HPS4-203ENST00000402105 PCOTHQ58A44 107 aa5.8□□□□□ -1.48
HPS4-203ENST00000402105 TRAV22A0A0B4J277 110 aa5.8□□□□□ -1.48
HPS4-203ENST00000402105 SPTSSBQ8NFR3 76 aa5.8□□□□□ -1.48
HPS4-203ENST00000402105 COL7A1Q02388 2944 aa5.8□□□□□ -1.48
HPS4-203ENST00000402105 SPRR4Q96PI1 79 aa5.8□□□□□ -1.48
HPS4-203ENST00000402105 IGLV9-49A0A0B4J1Y8 123 aa5.79□□□□□ -1.48
HPS4-203ENST00000402105 SPRR1AP35321 89 aa5.78□□□□□ -1.48
HPS4-203ENST00000402105 CHKB-CPT1BH3BT56 60 aa5.78□□□□□ -1.48
HPS4-203ENST00000402105 TLX1NBP0CAT3 122 aa5.78□□□□□ -1.48
HPS4-203ENST00000402105 A8MU10 97 aa5.78□□□□□ -1.48
HPS4-203ENST00000402105 B9D2Q9BPU9 175 aa5.78□□□□□ -1.48
HPS4-203ENST00000402105 KRTAP24-1Q3LI83 254 aa5.77□□□□□ -1.49
HPS4-203ENST00000402105 F8WDY8 70 aa5.77□□□□□ -1.49
HPS4-203ENST00000402105 PRR15LQ9BU68 103 aa5.76□□□□□ -1.49
HPS4-203ENST00000402105 NDUFB1O75438 58 aa5.75□□□□□ -1.49
HPS4-203ENST00000402105 PLA2G2DQ9UNK4 145 aa5.75□□□□□ -1.49
HPS4-203ENST00000402105 KRTAP11-1Q8IUC1 163 aa5.75□□□□□ -1.49
HPS4-203ENST00000402105 KRTAP1-5Q9BYS1 174 aa5.74□□□□□ -1.49
HPS4-203ENST00000402105 A0A1B0GW54 56 aa5.74□□□□□ -1.49
HPS4-203ENST00000402105 PMAIP1Q13794 54 aa5.73□□□□□ -1.49
HPS4-203ENST00000402105 ZCCHC13Q8WW36 166 aaKnown RBP5.73□□□□□ -1.49
HPS4-203ENST00000402105 IGLV5-37A0A075B6J1 123 aa5.73□□□□□ -1.49
HPS4-203ENST00000402105 ANK2Q01484 3957 aa5.73□□□□□ -1.49
HPS4-203ENST00000402105 C16orf90A8MZG2 172 aa5.72□□□□□ -1.49
HPS4-203ENST00000402105 PRR15Q8IV56 129 aa5.72□□□□□ -1.49
HPS4-203ENST00000402105 IGHV6-1A0A0B4J1U7 121 aa5.71□□□□□ -1.5
HPS4-203ENST00000402105 A6NED7 52 aa5.71□□□□□ -1.5
HPS4-203ENST00000402105 SEC61GP60059 68 aa5.71□□□□□ -1.5
HPS4-203ENST00000402105 CNBPP62633 177 aaKnown RBP5.71□□□□□ -1.5
HPS4-203ENST00000402105 Q1T7F1 81 aa5.71□□□□□ -1.5
HPS4-203ENST00000402105 ANAPC11Q9NYG5 84 aa5.71□□□□□ -1.5
HPS4-203ENST00000402105 SPINK6Q6UWN8 80 aa5.71□□□□□ -1.5
HPS4-203ENST00000402105 MDFIQ99750 246 aa5.7□□□□□ -1.5
HPS4-203ENST00000402105 SPAG11AQ6PDA7 123 aa5.7□□□□□ -1.5
HPS4-203ENST00000402105 LCE6AA0A183 80 aa5.69□□□□□ -1.5
HPS4-203ENST00000402105 A8MWP4 228 aa5.69□□□□□ -1.5
HPS4-203ENST00000402105 CDK2AP2O75956 126 aa5.69□□□□□ -1.5
HPS4-203ENST00000402105 K7EIL1 84 aa5.67□□□□□ -1.5
HPS4-203ENST00000402105 CYP4F30PQ9H0H9 118 aa5.67□□□□□ -1.5
HPS4-203ENST00000402105 PANO1I0J062 215 aa5.66□□□□□ -1.5
HPS4-203ENST00000402105 COA5Q86WW8 74 aa5.66□□□□□ -1.5
HPS4-203ENST00000402105 Q5VV11 94 aa5.66□□□□□ -1.5
HPS4-203ENST00000402105 KRTAP29-1A8MX34 341 aaPredicted RBP5.65□□□□□ -1.5
HPS4-203ENST00000402105 Q8N9P0 234 aaPredicted RBP5.65□□□□□ -1.51
HPS4-203ENST00000402105 RETNLBQ9BQ08 111 aa5.64□□□□□ -1.51
HPS4-203ENST00000402105 LINC00472Q9H8W2 130 aa5.64□□□□□ -1.51
HPS4-203ENST00000402105 DNAH10Q8IVF4 4471 aa5.64□□□□□ -1.51
HPS4-203ENST00000402105 MOBPQ13875 183 aa5.63□□□□□ -1.51
HPS4-203ENST00000402105 LYSTQ99698 3801 aa5.62□□□□□ -1.51
HPS4-203ENST00000402105 MMP24-AS1A0A0U1RRL7 71 aa5.62□□□□□ -1.51
HPS4-203ENST00000402105 LIMD2Q9BT23 127 aa5.61□□□□□ -1.51
HPS4-203ENST00000402105 C14orf177Q52M58 125 aa5.61□□□□□ -1.51
HPS4-203ENST00000402105 IGLV8-61A0A075B6I0 122 aa5.6□□□□□ -1.51
HPS4-203ENST00000402105 CD164Q04900 197 aa5.6□□□□□ -1.51
HPS4-203ENST00000402105 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.6□□□□□ -1.51
HPS4-203ENST00000402105 C9orf163Q8N9P6 203 aa5.59□□□□□ -1.51
HPS4-203ENST00000402105 A0A087X002 238 aa5.58□□□□□ -1.52
HPS4-203ENST00000402105 NOTCH2NLQ7Z3S9 236 aa5.58□□□□□ -1.52
HPS4-203ENST00000402105 CIRBP-AS1Q8TBR5 109 aa5.58□□□□□ -1.52
HPS4-203ENST00000402105 C8orf17Q9NRJ1 99 aa5.58□□□□□ -1.52
HPS4-203ENST00000402105 SPANXA2-OT1Q8N9U9 137 aa5.58□□□□□ -1.52
HPS4-203ENST00000402105 H3BPC8 53 aa5.57□□□□□ -1.52
HPS4-203ENST00000402105 LCA10Q71F78 164 aa5.56□□□□□ -1.52
HPS4-203ENST00000402105 PRR26Q8N8Z3 221 aa5.56□□□□□ -1.52
HPS4-203ENST00000402105 IGLV7-46A0A075B6I9 117 aa5.55□□□□□ -1.52
HPS4-203ENST00000402105 NBDYA0A0U1RRE5 68 aa5.55□□□□□ -1.52
HPS4-203ENST00000402105 APLNQ9ULZ1 77 aa5.55□□□□□ -1.52
HPS4-203ENST00000402105 LOC101927531A0A1B0GV80 90 aa5.53□□□□□ -1.52
HPS4-203ENST00000402105 SPRR1BP22528 89 aa5.53□□□□□ -1.52
HPS4-203ENST00000402105 A0A1B0GVX0 72 aa5.53□□□□□ -1.52
HPS4-203ENST00000402105 MRPL34Q9BQ48 92 aaKnown RBP5.53□□□□□ -1.52
HPS4-203ENST00000402105 PSORS1C2Q9UIG4 136 aa5.53□□□□□ -1.52
HPS4-203ENST00000402105 SPINK7P58062 85 aa5.52□□□□□ -1.53
HPS4-203ENST00000402105 TP53AIP1Q9HCN2 124 aa5.52□□□□□ -1.53
HPS4-203ENST00000402105 TGP01266 2768 aa5.52□□□□□ -1.53
HPS4-203ENST00000402105 HRES1P13985 223 aa5.52□□□□□ -1.53
HPS4-203ENST00000402105 Q96NJ1 140 aa5.51□□□□□ -1.53
HPS4-203ENST00000402105 HUWE1Q7Z6Z7 4374 aaKnown RBP5.49□□□□□ -1.53
HPS4-203ENST00000402105 Q75L30 129 aa5.49□□□□□ -1.53
HPS4-203ENST00000402105 RTL8CO15255 209 aa5.48□□□□□ -1.53
HPS4-203ENST00000402105 Q5W150 140 aa5.48□□□□□ -1.53
HPS4-203ENST00000402105 ATP11AUNQ6ZP68 121 aa5.48□□□□□ -1.53
HPS4-203ENST00000402105 DNAH9Q9NYC9 4486 aa5.48□□□□□ -1.53
HPS4-203ENST00000402105 KTN1-AS1Q86SY8 53 aa5.47□□□□□ -1.53
HPS4-203ENST00000402105 ZNF706Q9Y5V0 76 aaPredicted RBP5.47□□□□□ -1.53
HPS4-203ENST00000402105 SPACA4Q8TDM5 124 aa5.47□□□□□ -1.53
HPS4-203ENST00000402105 WWC2-AS2Q96NR7 200 aa5.46□□□□□ -1.53
HPS4-203ENST00000402105 A0A087WTM6 91 aa5.46□□□□□ -1.54
HPS4-203ENST00000402105 RBM12B-AS1Q9P1G2 102 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 187.2 ms