RNA–Protein interactions for RNA: ENST00000400163.6

COL4A2-202, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 5

Gene COL4A2, Length 491 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-202ENST00000400163 C1orf195Q5TG92 126 aa9.75□□□□□ -0.85
COL4A2-202ENST00000400163 SCGB1D4Q6XE38 83 aa9.74□□□□□ -0.85
COL4A2-202ENST00000400163 SMIM29Q86T20 159 aa9.72□□□□□ -0.85
COL4A2-202ENST00000400163 IGLV5-48A0A075B6I7 105 aa9.71□□□□□ -0.86
COL4A2-202ENST00000400163 A0A1B0GWB2 263 aa9.71□□□□□ -0.86
COL4A2-202ENST00000400163 TMEM238LA0A1B0GVL6 79 aa9.7□□□□□ -0.86
COL4A2-202ENST00000400163 COPS9Q8WXC6 57 aa9.7□□□□□ -0.86
COL4A2-202ENST00000400163 HSBP1L1C9JCN9 74 aa9.68□□□□□ -0.86
COL4A2-202ENST00000400163 TCL1BO95988 128 aa9.68□□□□□ -0.86
COL4A2-202ENST00000400163 MUSTN1Q8IVN3 82 aa9.68□□□□□ -0.86
COL4A2-202ENST00000400163 PAM16Q9Y3D7 125 aa9.68□□□□□ -0.86
COL4A2-202ENST00000400163 A4D1N5 150 aa9.66□□□□□ -0.86
COL4A2-202ENST00000400163 C14orf144Q96I85 54 aa9.66□□□□□ -0.86
COL4A2-202ENST00000400163 NHP2Q9NX24 153 aaKnown RBP9.66□□□□□ -0.86
COL4A2-202ENST00000400163 A0A0G2JQZ4 141 aa9.64□□□□□ -0.87
COL4A2-202ENST00000400163 A6NDN8 102 aa9.64□□□□□ -0.87
COL4A2-202ENST00000400163 IFITM1P13164 125 aa9.64□□□□□ -0.87
COL4A2-202ENST00000400163 SPATA45Q537H7 98 aa9.64□□□□□ -0.87
COL4A2-202ENST00000400163 PYY3Q5JQD4 70 aa9.64□□□□□ -0.87
COL4A2-202ENST00000400163 LOC100996750A0A140TA64 210 aa9.62□□□□□ -0.87
COL4A2-202ENST00000400163 COX8AP10176 69 aa9.62□□□□□ -0.87
COL4A2-202ENST00000400163 Q6ZVH6 145 aa9.62□□□□□ -0.87
COL4A2-202ENST00000400163 KRTAP4-6Q9BYQ5 205 aa9.62□□□□□ -0.87
COL4A2-202ENST00000400163 F8WEM9 126 aa9.6□□□□□ -0.87
COL4A2-202ENST00000400163 Q6Q795 121 aa9.6□□□□□ -0.87
COL4A2-202ENST00000400163 VAMP8Q9BV40 100 aa9.6□□□□□ -0.87
COL4A2-202ENST00000400163 SSPOA2VEC9 5147 aa9.58□□□□□ -0.88
COL4A2-202ENST00000400163 TRAV13-2A0A0B4J235 113 aa9.57□□□□□ -0.88
COL4A2-202ENST00000400163 C2orf91Q6ZV80 131 aa9.57□□□□□ -0.88
COL4A2-202ENST00000400163 C12orf57Q99622 126 aa9.56□□□□□ -0.88
COL4A2-202ENST00000400163 USH2AO75445 5202 aa9.56□□□□□ -0.88
COL4A2-202ENST00000400163 CFC1P0CG37 223 aa9.55□□□□□ -0.88
COL4A2-202ENST00000400163 DLEU1O43261 78 aa9.54□□□□□ -0.88
COL4A2-202ENST00000400163 SMIM11BQ8TCY0 68 aa9.54□□□□□ -0.88
COL4A2-202ENST00000400163 HIST1H4GQ99525 98 aa9.54□□□□□ -0.88
COL4A2-202ENST00000400163 Q6JHZ5 121 aa9.53□□□□□ -0.88
COL4A2-202ENST00000400163 ATP11AUNQ6ZP68 121 aa9.53□□□□□ -0.88
COL4A2-202ENST00000400163 KRTAP9-8Q9BYQ0 159 aa9.53□□□□□ -0.88
COL4A2-202ENST00000400163 VAMP3Q15836 100 aa9.52□□□□□ -0.89
COL4A2-202ENST00000400163 CLEC2BQ92478 149 aa9.51□□□□□ -0.89
COL4A2-202ENST00000400163 TRBV7-7A0A0K0K1E9 115 aa9.5□□□□□ -0.89
COL4A2-202ENST00000400163 Q75L30 129 aa9.5□□□□□ -0.89
COL4A2-202ENST00000400163 LINC00575Q6W349 94 aa9.48□□□□□ -0.89
COL4A2-202ENST00000400163 OBSCN-AS1Q96MR7 158 aa9.48□□□□□ -0.89
COL4A2-202ENST00000400163 Q6ZQY7 126 aa9.47□□□□□ -0.89
COL4A2-202ENST00000400163 HIGD1BQ9P298 99 aa9.47□□□□□ -0.89
COL4A2-202ENST00000400163 hADV29S1A0JD25 119 aa9.46□□□□□ -0.9
COL4A2-202ENST00000400163 IGFL1Q6UW32 110 aa9.46□□□□□ -0.9
COL4A2-202ENST00000400163 FCGBPQ9Y6R7 5405 aaPredicted RBP9.45□□□□□ -0.9
COL4A2-202ENST00000400163 OCIAD2Q56VL3 154 aa9.44□□□□□ -0.9
COL4A2-202ENST00000400163 FXYD2P54710 66 aa9.42□□□□□ -0.9
COL4A2-202ENST00000400163 CEND1Q8N111 149 aa9.41□□□□□ -0.9
COL4A2-202ENST00000400163 PPDPFLQ8WWR9 84 aa9.41□□□□□ -0.9
COL4A2-202ENST00000400163 LST1O00453 97 aa9.4□□□□□ -0.9
COL4A2-202ENST00000400163 LOC105371267A0A1B0GV96 52 aa9.39□□□□□ -0.91
COL4A2-202ENST00000400163 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.39□□□□□ -0.91
COL4A2-202ENST00000400163 KRTAP19-1Q8IUB9 90 aa9.38□□□□□ -0.91
COL4A2-202ENST00000400163 Q96NJ1 140 aa9.38□□□□□ -0.91
COL4A2-202ENST00000400163 SNHG12Q9BXW3 62 aa9.36□□□□□ -0.91
COL4A2-202ENST00000400163 UQCR10Q9UDW1 63 aa9.36□□□□□ -0.91
COL4A2-202ENST00000400163 SS18L2Q9UHA2 77 aa9.36□□□□□ -0.91
COL4A2-202ENST00000400163 K7ERJ3 54 aa9.35□□□□□ -0.91
COL4A2-202ENST00000400163 RAB37Q96AX2 223 aa9.35□□□□□ -0.91
COL4A2-202ENST00000400163 TRBV20-1A0A075B6N2 111 aa9.34□□□□□ -0.91
COL4A2-202ENST00000400163 MT2AP02795 61 aa9.34□□□□□ -0.91
COL4A2-202ENST00000400163 BVES-AS1Q5T3Y7 98 aa9.34□□□□□ -0.91
COL4A2-202ENST00000400163 C20orf166-AS1Q96NR2 134 aa9.34□□□□□ -0.91
COL4A2-202ENST00000400163 A0A0B4J2C4 111 aa9.33□□□□□ -0.92
COL4A2-202ENST00000400163 HSD52Q0P140 79 aa9.33□□□□□ -0.92
COL4A2-202ENST00000400163 A8MUU9 505 aa9.31□□□□□ -0.92
COL4A2-202ENST00000400163 H3BUT2 72 aa9.31□□□□□ -0.92
COL4A2-202ENST00000400163 FAM218AQ96MZ4 157 aa9.29□□□□□ -0.92
COL4A2-202ENST00000400163 PRO1854Q9UHT4 67 aa9.29□□□□□ -0.92
COL4A2-202ENST00000400163 SMIM6P0DI80 62 aa9.28□□□□□ -0.92
COL4A2-202ENST00000400163 SYNE2Q8WXH0 6885 aaKnown RBP9.28□□□□□ -0.92
COL4A2-202ENST00000400163 MT1FP04733 61 aa9.26□□□□□ -0.93
COL4A2-202ENST00000400163 TEN1Q86WV5 123 aa9.26□□□□□ -0.93
COL4A2-202ENST00000400163 SNCGO76070 127 aa9.25□□□□□ -0.93
COL4A2-202ENST00000400163 KRTAP9-3Q9BYQ3 159 aa9.25□□□□□ -0.93
COL4A2-202ENST00000400163 MACF1Q9UPN3 7388 aaKnown RBP9.24□□□□□ -0.93
COL4A2-202ENST00000400163 TRIAP1O43715 76 aa9.24□□□□□ -0.93
COL4A2-202ENST00000400163 A0A087WSZ3 146 aa9.2□□□□□ -0.94
COL4A2-202ENST00000400163 NDUFV3P56181 108 aaKnown RBP9.2□□□□□ -0.94
COL4A2-202ENST00000400163 KRTAP10-10P60014 251 aa9.2□□□□□ -0.94
COL4A2-202ENST00000400163 FAM236DA0A1B0GTK5 79 aa9.19□□□□□ -0.94
COL4A2-202ENST00000400163 FAM236CP0DP71 79 aa9.19□□□□□ -0.94
COL4A2-202ENST00000400163 DSCR10P59022 87 aa9.18□□□□□ -0.94
COL4A2-202ENST00000400163 H0YGX0 51 aa9.17□□□□□ -0.94
COL4A2-202ENST00000400163 PSMB2P49721 201 aa9.16□□□□□ -0.94
COL4A2-202ENST00000400163 SIGMAR1Q99720 223 aa9.16□□□□□ -0.94
COL4A2-202ENST00000400163 NAA38Q9BRA0 125 aaKnown RBP9.16□□□□□ -0.94
COL4A2-202ENST00000400163 H3BMG7 143 aa9.14□□□□□ -0.95
COL4A2-202ENST00000400163 LINC00313P59037 77 aa9.13□□□□□ -0.95
COL4A2-202ENST00000400163 RBM12B-AS1Q9P1G2 102 aa9.13□□□□□ -0.95
COL4A2-202ENST00000400163 KRTAP16-1A8MUX0 517 aa9.12□□□□□ -0.95
COL4A2-202ENST00000400163 TSTD3H0UI37 97 aa9.11□□□□□ -0.95
COL4A2-202ENST00000400163 BATFQ16520 125 aa9.1□□□□□ -0.95
COL4A2-202ENST00000400163 LINC00846Q9NV44 126 aa9.1□□□□□ -0.95
COL4A2-202ENST00000400163 A0A1B0GX51 115 aa9.09□□□□□ -0.95
COL4A2-202ENST00000400163 FABP2P12104 132 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms