RNA–Protein interactions for RNA: ENST00000399177.7

CCDC178-203, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC178, Length 1,017 nt, Biotype non stop decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-203ENST00000399177 DIP2AQ14689 1571 aa0.17□□□□□ -2.38
CCDC178-203ENST00000399177 HMCN2Q8NDA2 5059 aa0.17□□□□□ -2.38
CCDC178-203ENST00000399177 WIZO95785 1651 aa0.17□□□□□ -2.38
CCDC178-203ENST00000399177 DNAH3Q8TD57 4116 aa0.17□□□□□ -2.38
CCDC178-203ENST00000399177 SPENQ96T58 3664 aaKnown RBP0.17□□□□□ -2.38
CCDC178-203ENST00000399177 MYCBP2O75592 4640 aa0.17□□□□□ -2.38
CCDC178-203ENST00000399177 PKHD1P08F94 4074 aa0.16□□□□□ -2.38
CCDC178-203ENST00000399177 DNAH9Q9NYC9 4486 aa0.16□□□□□ -2.38
CCDC178-203ENST00000399177 NSD1Q96L73 2696 aaPredicted RBP0.16□□□□□ -2.38
CCDC178-203ENST00000399177 CDC42BPGQ6DT37 1551 aa0.16□□□□□ -2.38
CCDC178-203ENST00000399177 ZC3H13Q5T200 1668 aaKnown RBP0.16□□□□□ -2.38
CCDC178-203ENST00000399177 SPTBN5Q9NRC6 3674 aaKnown RBP0.16□□□□□ -2.38
CCDC178-203ENST00000399177 ASXL1Q8IXJ9 1541 aa0.16□□□□□ -2.38
CCDC178-203ENST00000399177 ABCA9Q8IUA7 1624 aa0.16□□□□□ -2.38
CCDC178-203ENST00000399177 NBASA2RRP1 2371 aa0.16□□□□□ -2.38
CCDC178-203ENST00000399177 RALGAPBQ86X10 1494 aa0.16□□□□□ -2.38
CCDC178-203ENST00000399177 PARP4Q9UKK3 1724 aaKnown RBP0.16□□□□□ -2.38
CCDC178-203ENST00000399177 FLGP20930 4061 aaPredicted RBP0.15□□□□□ -2.38
CCDC178-203ENST00000399177 MACF1Q9UPN3 7388 aaKnown RBP0.15□□□□□ -2.39
CCDC178-203ENST00000399177 DEFB131BA0A096LNP1 70 aa0.15□□□□□ -2.39
CCDC178-203ENST00000399177 ENHOQ6UWT2 76 aa0.15□□□□□ -2.39
CCDC178-203ENST00000399177 MROH1Q8NDA8 1641 aa0.15□□□□□ -2.39
CCDC178-203ENST00000399177 NRAPQ86VF7 1730 aa0.15□□□□□ -2.39
CCDC178-203ENST00000399177 TENM2Q9NT68 2774 aa0.15□□□□□ -2.39
CCDC178-203ENST00000399177 ZZEF1O43149 2961 aa0.15□□□□□ -2.39
CCDC178-203ENST00000399177 NF1P21359 2839 aa0.14□□□□□ -2.39
CCDC178-203ENST00000399177 MAP1AP78559 2803 aaPredicted RBP0.14□□□□□ -2.39
CCDC178-203ENST00000399177 DNAH11Q96DT5 4516 aa0.14□□□□□ -2.39
CCDC178-203ENST00000399177 HFM1A2PYH4 1435 aa0.14□□□□□ -2.39
CCDC178-203ENST00000399177 PKHD1L1Q86WI1 4243 aa0.14□□□□□ -2.39
CCDC178-203ENST00000399177 MRPL33O75394 65 aaKnown RBP0.14□□□□□ -2.39
CCDC178-203ENST00000399177 UBL5Q9BZL1 73 aa0.14□□□□□ -2.39
CCDC178-203ENST00000399177 KCNQ1DNQ9H478 68 aa0.14□□□□□ -2.39
CCDC178-203ENST00000399177 APOBP04114 4563 aaKnown RBP0.14□□□□□ -2.39
CCDC178-203ENST00000399177 PLXNC1O60486 1568 aa0.14□□□□□ -2.39
CCDC178-203ENST00000399177 FLNAP21333 2647 aaKnown RBP0.14□□□□□ -2.39
CCDC178-203ENST00000399177 PDZD2O15018 2839 aa0.14□□□□□ -2.39
CCDC178-203ENST00000399177 VPS13DQ5THJ4 4388 aa0.13□□□□□ -2.39
CCDC178-203ENST00000399177 SACSQ9NZJ4 4579 aa0.13□□□□□ -2.39
CCDC178-203ENST00000399177 LRP2P98164 4655 aa0.13□□□□□ -2.39
CCDC178-203ENST00000399177 DEPDC5O75140 1603 aa0.13□□□□□ -2.39
CCDC178-203ENST00000399177 TJP1Q07157 1748 aa0.13□□□□□ -2.39
CCDC178-203ENST00000399177 LRP1BQ9NZR2 4599 aa0.13□□□□□ -2.39
CCDC178-203ENST00000399177 H0YAA0 97 aa0.13□□□□□ -2.39
CCDC178-203ENST00000399177 ATXN8Q156A1 80 aa0.13□□□□□ -2.39
CCDC178-203ENST00000399177 KALRNO60229 2985 aa0.13□□□□□ -2.39
CCDC178-203ENST00000399177 ACANP16112 2415 aa0.13□□□□□ -2.39
CCDC178-203ENST00000399177 CEP290O15078 2479 aa0.12□□□□□ -2.39
CCDC178-203ENST00000399177 DMXL1Q9Y485 3027 aa0.12□□□□□ -2.39
CCDC178-203ENST00000399177 DNAH6Q9C0G6 4158 aa0.12□□□□□ -2.39
CCDC178-203ENST00000399177 FLNBO75369 2602 aaKnown RBP0.12□□□□□ -2.39
CCDC178-203ENST00000399177 GLI2P10070 1586 aa0.12□□□□□ -2.39
CCDC178-203ENST00000399177 SVEP1Q4LDE5 3571 aa0.12□□□□□ -2.39
CCDC178-203ENST00000399177 SMIM31A0A1B0GVY4 71 aa0.12□□□□□ -2.39
CCDC178-203ENST00000399177 K7EMI3 77 aa0.12□□□□□ -2.39
CCDC178-203ENST00000399177 SPRR2BP35325 72 aa0.12□□□□□ -2.39
CCDC178-203ENST00000399177 CRIP1P50238 77 aa0.12□□□□□ -2.39
CCDC178-203ENST00000399177 GNG13Q9P2W3 67 aa0.12□□□□□ -2.39
CCDC178-203ENST00000399177 DNAH7Q8WXX0 4024 aa0.12□□□□□ -2.39
CCDC178-203ENST00000399177 EFCAB5A4FU69 1503 aa0.12□□□□□ -2.39
CCDC178-203ENST00000399177 COL6A3P12111 3177 aa0.12□□□□□ -2.39
CCDC178-203ENST00000399177 TGP01266 2768 aa0.11□□□□□ -2.39
CCDC178-203ENST00000399177 INO80Q9ULG1 1556 aaPredicted RBP0.11□□□□□ -2.39
CCDC178-203ENST00000399177 SPRR2GQ9BYE4 73 aa0.11□□□□□ -2.39
CCDC178-203ENST00000399177 GCN1Q92616 2671 aaKnown RBP0.11□□□□□ -2.39
CCDC178-203ENST00000399177 FAT3Q8TDW7 4589 aa0.11□□□□□ -2.39
CCDC178-203ENST00000399177 PKD1L2Q7Z442 2459 aa0.11□□□□□ -2.39
CCDC178-203ENST00000399177 LAMA5O15230 3695 aa0.11□□□□□ -2.39
CCDC178-203ENST00000399177 NBEAL2Q6ZNJ1 2754 aa0.11□□□□□ -2.39
CCDC178-203ENST00000399177 PCNX1Q96RV3 2341 aa0.1□□□□□ -2.39
CCDC178-203ENST00000399177 EPG5Q9HCE0 2579 aa0.1□□□□□ -2.39
CCDC178-203ENST00000399177 HTTP42858 3142 aa0.1□□□□□ -2.39
CCDC178-203ENST00000399177 ABCA6Q8N139 1617 aa0.1□□□□□ -2.39
CCDC178-203ENST00000399177 RNF17Q9BXT8 1623 aaKnown RBP0.1□□□□□ -2.39
CCDC178-203ENST00000399177 DNAH1Q9P2D7 4330 aa0.1□□□□□ -2.39
CCDC178-203ENST00000399177 LINC01549A6NIU2 74 aa0.1□□□□□ -2.39
CCDC178-203ENST00000399177 LYNX1G3V0Z9 82 aa0.1□□□□□ -2.39
CCDC178-203ENST00000399177 SFTA3P0C7M3 94 aa0.1□□□□□ -2.39
CCDC178-203ENST00000399177 ANK3Q12955 4377 aaKnown RBP0.1□□□□□ -2.39
CCDC178-203ENST00000399177 SETD2Q9BYW2 2564 aaPredicted RBP0.1□□□□□ -2.39
CCDC178-203ENST00000399177 NHSQ6T4R5 1651 aa0.1□□□□□ -2.39
CCDC178-203ENST00000399177 THOC2Q8NI27 1593 aaKnown RBP0.1□□□□□ -2.39
CCDC178-203ENST00000399177 TACC2O95359 2948 aa0.1□□□□□ -2.39
CCDC178-203ENST00000399177 CCDC180Q9P1Z9 1646 aa0.09□□□□□ -2.39
CCDC178-203ENST00000399177 DNAH2Q9P225 4427 aa0.09□□□□□ -2.39
CCDC178-203ENST00000399177 ERICH3Q5RHP9 1530 aa0.09□□□□□ -2.39
CCDC178-203ENST00000399177 SRRM2Q9UQ35 2752 aaKnown RBP0.09□□□□□ -2.39
CCDC178-203ENST00000399177 FASNP49327 2511 aaKnown RBP0.09□□□□□ -2.39
CCDC178-203ENST00000399177 LRRK2Q5S007 2527 aa0.09□□□□□ -2.39
CCDC178-203ENST00000399177 A0A087WWC5 75 aa0.09□□□□□ -2.4
CCDC178-203ENST00000399177 ETDCA0A1B0GVM5 59 aa0.09□□□□□ -2.4
CCDC178-203ENST00000399177 H0YGG7 62 aa0.09□□□□□ -2.4
CCDC178-203ENST00000399177 DEFB130BP0DP73 79 aa0.09□□□□□ -2.4
CCDC178-203ENST00000399177 DEFB130AP0DP74 79 aa0.09□□□□□ -2.4
CCDC178-203ENST00000399177 S100ZQ8WXG8 99 aa0.09□□□□□ -2.4
CCDC178-203ENST00000399177 UTP20O75691 2785 aaKnown RBP0.09□□□□□ -2.4
CCDC178-203ENST00000399177 DNAH8Q96JB1 4490 aa0.09□□□□□ -2.4
CCDC178-203ENST00000399177 STAB1Q9NY15 2570 aa0.08□□□□□ -2.4
CCDC178-203ENST00000399177 SPG11Q96JI7 2443 aa0.08□□□□□ -2.4
CCDC178-203ENST00000399177 FAT1Q14517 4588 aa0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms