RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 IGFL1Q6UW32 110 aa4.54□□□□□ -1.68
RGPD1-201ENST00000398193 ZNF861PO60384 105 aa4.54□□□□□ -1.68
RGPD1-201ENST00000398193 C3orf22Q8N5N4 141 aa4.54□□□□□ -1.68
RGPD1-201ENST00000398193 HIGD2AQ9BW72 106 aa4.54□□□□□ -1.68
RGPD1-201ENST00000398193 LYSTQ99698 3801 aa4.54□□□□□ -1.68
RGPD1-201ENST00000398193 COX7CP15954 63 aa4.53□□□□□ -1.68
RGPD1-201ENST00000398193 SERP2Q8N6R1 65 aa4.52□□□□□ -1.69
RGPD1-201ENST00000398193 HECTD4Q9Y4D8 3996 aa4.52□□□□□ -1.69
RGPD1-201ENST00000398193 BPY2O14599 106 aa4.52□□□□□ -1.69
RGPD1-201ENST00000398193 HAMPP81172 84 aa4.52□□□□□ -1.69
RGPD1-201ENST00000398193 J3KT08 172 aa4.51□□□□□ -1.69
RGPD1-201ENST00000398193 PSORS1C2Q9UIG4 136 aa4.51□□□□□ -1.69
RGPD1-201ENST00000398193 IGLV7-43P04211 117 aa4.51□□□□□ -1.69
RGPD1-201ENST00000398193 COL6A5A8TX70 2615 aa4.51□□□□□ -1.69
RGPD1-201ENST00000398193 CD164Q04900 197 aa4.51□□□□□ -1.69
RGPD1-201ENST00000398193 DNAH11Q96DT5 4516 aa4.5□□□□□ -1.69
RGPD1-201ENST00000398193 TRAV7A0A075B6U4 112 aa4.5□□□□□ -1.69
RGPD1-201ENST00000398193 IGKV4-1P06312 121 aa4.5□□□□□ -1.69
RGPD1-201ENST00000398193 LCE6AA0A183 80 aa4.5□□□□□ -1.69
RGPD1-201ENST00000398193 SS18L2Q9UHA2 77 aa4.49□□□□□ -1.69
RGPD1-201ENST00000398193 FAM229BQ4G0N7 80 aa4.48□□□□□ -1.69
RGPD1-201ENST00000398193 DNHD1Q96M86 4753 aa4.47□□□□□ -1.69
RGPD1-201ENST00000398193 KRTAP10-2P60368 255 aa4.47□□□□□ -1.69
RGPD1-201ENST00000398193 A0A087WVE0 104 aa4.47□□□□□ -1.69
RGPD1-201ENST00000398193 CCDC179H3BU77 68 aa4.46□□□□□ -1.69
RGPD1-201ENST00000398193 SSBP3-AS1Q7Z2R9 100 aa4.46□□□□□ -1.7
RGPD1-201ENST00000398193 ASB16-AS1Q495Z4 193 aa4.45□□□□□ -1.7
RGPD1-201ENST00000398193 C9orf153Q5TBE3 101 aa4.45□□□□□ -1.7
RGPD1-201ENST00000398193 CIRBP-AS1Q8TBR5 109 aa4.45□□□□□ -1.7
RGPD1-201ENST00000398193 COL7A1Q02388 2944 aa4.45□□□□□ -1.7
RGPD1-201ENST00000398193 DSCR10P59022 87 aa4.45□□□□□ -1.7
RGPD1-201ENST00000398193 KRTAP10-1P60331 282 aa4.44□□□□□ -1.7
RGPD1-201ENST00000398193 LINC00472Q9H8W2 130 aa4.44□□□□□ -1.7
RGPD1-201ENST00000398193 FAT2Q9NYQ8 4349 aa4.44□□□□□ -1.7
RGPD1-201ENST00000398193 A8MWP4 228 aa4.44□□□□□ -1.7
RGPD1-201ENST00000398193 SCXQ7RTU7 201 aa4.44□□□□□ -1.7
RGPD1-201ENST00000398193 Q5XG85 94 aa4.44□□□□□ -1.7
RGPD1-201ENST00000398193 DNAH5Q8TE73 4624 aa4.44□□□□□ -1.7
RGPD1-201ENST00000398193 NDUFC1O43677 76 aa4.43□□□□□ -1.7
RGPD1-201ENST00000398193 A0A087WSZ3 146 aa4.43□□□□□ -1.7
RGPD1-201ENST00000398193 PKD1P98161 4303 aa4.43□□□□□ -1.7
RGPD1-201ENST00000398193 PKHD1L1Q86WI1 4243 aa4.43□□□□□ -1.7
RGPD1-201ENST00000398193 NBEAL1Q6ZS30 2694 aa4.43□□□□□ -1.7
RGPD1-201ENST00000398193 A0A1B0GVY2 172 aa4.43□□□□□ -1.7
RGPD1-201ENST00000398193 HCG22E2RYF7 251 aa4.43□□□□□ -1.7
RGPD1-201ENST00000398193 MEGF8Q7Z7M0 2845 aa4.42□□□□□ -1.7
RGPD1-201ENST00000398193 TMEM258P61165 79 aa4.42□□□□□ -1.7
RGPD1-201ENST00000398193 KMT2AQ03164 3969 aa4.41□□□□□ -1.7
RGPD1-201ENST00000398193 PRR15Q8IV56 129 aa4.41□□□□□ -1.7
RGPD1-201ENST00000398193 FAM30AQ9NZY2 134 aa4.41□□□□□ -1.7
RGPD1-201ENST00000398193 KLKP1Q107X0 134 aa4.41□□□□□ -1.7
RGPD1-201ENST00000398193 OCR1Q9BZK8 76 aa4.41□□□□□ -1.7
RGPD1-201ENST00000398193 NDUFB1O75438 58 aa4.41□□□□□ -1.7
RGPD1-201ENST00000398193 ATP5EP56381 51 aaPredicted RBP4.4□□□□□ -1.7
RGPD1-201ENST00000398193 SPINK6Q6UWN8 80 aa4.4□□□□□ -1.7
RGPD1-201ENST00000398193 IGLV9-49A0A0B4J1Y8 123 aa4.4□□□□□ -1.7
RGPD1-201ENST00000398193 NOTCH1P46531 2555 aa4.4□□□□□ -1.7
RGPD1-201ENST00000398193 Q96NJ1 140 aa4.4□□□□□ -1.71
RGPD1-201ENST00000398193 MGAM2Q2M2H8 2515 aa4.4□□□□□ -1.71
RGPD1-201ENST00000398193 MOBPQ13875 183 aa4.4□□□□□ -1.71
RGPD1-201ENST00000398193 H3BPC8 53 aa4.39□□□□□ -1.71
RGPD1-201ENST00000398193 K7EQZ3 153 aa4.39□□□□□ -1.71
RGPD1-201ENST00000398193 RPS29P62273 56 aaKnown RBP4.39□□□□□ -1.71
RGPD1-201ENST00000398193 SACSQ9NZJ4 4579 aa4.39□□□□□ -1.71
RGPD1-201ENST00000398193 C5orf47Q569G3 176 aa4.38□□□□□ -1.71
RGPD1-201ENST00000398193 KRTAP29-1A8MX34 341 aaPredicted RBP4.38□□□□□ -1.71
RGPD1-201ENST00000398193 LIMD2Q9BT23 127 aa4.37□□□□□ -1.71
RGPD1-201ENST00000398193 C8orf87E5RJ46 101 aa4.37□□□□□ -1.71
RGPD1-201ENST00000398193 CDK2AP2O75956 126 aa4.37□□□□□ -1.71
RGPD1-201ENST00000398193 TP53AIP1Q9HCN2 124 aa4.36□□□□□ -1.71
RGPD1-201ENST00000398193 Q8N9L7 120 aa4.36□□□□□ -1.71
RGPD1-201ENST00000398193 A0A0U1RQV1 116 aa4.36□□□□□ -1.71
RGPD1-201ENST00000398193 RPS28P62857 69 aaKnown RBP4.35□□□□□ -1.71
RGPD1-201ENST00000398193 TMEM254Q8TBM7 123 aa4.35□□□□□ -1.71
RGPD1-201ENST00000398193 CASC2Q6XLA1 102 aa4.35□□□□□ -1.71
RGPD1-201ENST00000398193 STAB2Q8WWQ8 2551 aa4.35□□□□□ -1.71
RGPD1-201ENST00000398193 A0A1B0GVX0 72 aa4.35□□□□□ -1.71
RGPD1-201ENST00000398193 A0A0G2JQZ4 141 aa4.34□□□□□ -1.71
RGPD1-201ENST00000398193 SPAG11AQ6PDA7 123 aa4.34□□□□□ -1.71
RGPD1-201ENST00000398193 MMP24-AS1A0A0U1RRL7 71 aa4.34□□□□□ -1.71
RGPD1-201ENST00000398193 KRTAP1-4P0C5Y4 121 aa4.34□□□□□ -1.71
RGPD1-201ENST00000398193 C8orf17Q9NRJ1 99 aa4.33□□□□□ -1.72
RGPD1-201ENST00000398193 DYNC1H1Q14204 4646 aaKnown RBP4.33□□□□□ -1.72
RGPD1-201ENST00000398193 C20orf197Q8N268 126 aa4.33□□□□□ -1.72
RGPD1-201ENST00000398193 hDV103S1A0JD37 113 aa4.32□□□□□ -1.72
RGPD1-201ENST00000398193 SPINK1P00995 79 aa4.32□□□□□ -1.72
RGPD1-201ENST00000398193 KRTAP13-2Q52LG2 175 aa4.32□□□□□ -1.72
RGPD1-201ENST00000398193 MP68P56378 58 aa4.32□□□□□ -1.72
RGPD1-201ENST00000398193 ZCCHC13Q8WW36 166 aaKnown RBP4.32□□□□□ -1.72
RGPD1-201ENST00000398193 H7BZZ5 65 aa4.31□□□□□ -1.72
RGPD1-201ENST00000398193 FBN3Q75N90 2809 aa4.31□□□□□ -1.72
RGPD1-201ENST00000398193 PKHD1P08F94 4074 aa4.3□□□□□ -1.72
RGPD1-201ENST00000398193 FAM236DA0A1B0GTK5 79 aa4.3□□□□□ -1.72
RGPD1-201ENST00000398193 FAM236CP0DP71 79 aa4.3□□□□□ -1.72
RGPD1-201ENST00000398193 PLA2G1BP04054 148 aaKnown RBP4.29□□□□□ -1.72
RGPD1-201ENST00000398193 ANAPC11Q9NYG5 84 aa4.29□□□□□ -1.72
RGPD1-201ENST00000398193 DEFB116Q30KQ4 102 aa4.29□□□□□ -1.72
RGPD1-201ENST00000398193 HRCT1Q6UXD1 115 aa4.29□□□□□ -1.72
RGPD1-201ENST00000398193 MRPL34Q9BQ48 92 aaKnown RBP4.29□□□□□ -1.72
RGPD1-201ENST00000398193 HYDINQ4G0P3 5121 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms