RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 OCIAD2Q56VL3 154 aa13.98□□□□□ -0.17
TSPAN4-203ENST00000397397 KRTAP13-2Q52LG2 175 aa13.96□□□□□ -0.18
TSPAN4-203ENST00000397397 TRBV20-1A0A075B6N2 111 aa13.95□□□□□ -0.18
TSPAN4-203ENST00000397397 C3orf22Q8N5N4 141 aa13.95□□□□□ -0.18
TSPAN4-203ENST00000397397 LAMTOR3Q9UHA4 124 aa13.95□□□□□ -0.18
TSPAN4-203ENST00000397397 IGLV9-49A0A0B4J1Y8 123 aa13.94□□□□□ -0.18
TSPAN4-203ENST00000397397 J3QL48 77 aa13.94□□□□□ -0.18
TSPAN4-203ENST00000397397 DMBT1Q9UGM3 2413 aaPredicted RBP13.93□□□□□ -0.18
TSPAN4-203ENST00000397397 PPDPFLQ8WWR9 84 aa13.93□□□□□ -0.18
TSPAN4-203ENST00000397397 ORMDL1Q9P0S3 153 aa13.93□□□□□ -0.18
TSPAN4-203ENST00000397397 GHRHP01286 108 aa13.92□□□□□ -0.18
TSPAN4-203ENST00000397397 KRTAP10-8P60410 259 aa13.92□□□□□ -0.18
TSPAN4-203ENST00000397397 SMIM29Q86T20 159 aa13.92□□□□□ -0.18
TSPAN4-203ENST00000397397 TYMSOSQ8TAI1 123 aa13.91□□□□□ -0.18
TSPAN4-203ENST00000397397 C9orf153Q5TBE3 101 aa13.9□□□□□ -0.19
TSPAN4-203ENST00000397397 MT1HL1P0DM35 61 aa13.89□□□□□ -0.19
TSPAN4-203ENST00000397397 MOBPQ13875 183 aa13.89□□□□□ -0.19
TSPAN4-203ENST00000397397 SPCS1Q9Y6A9 102 aa13.89□□□□□ -0.19
TSPAN4-203ENST00000397397 H3BQ85 93 aa13.87□□□□□ -0.19
TSPAN4-203ENST00000397397 TNXBP22105 4242 aa13.87□□□□□ -0.19
TSPAN4-203ENST00000397397 F8WEM9 126 aa13.85□□□□□ -0.19
TSPAN4-203ENST00000397397 TMEM256-PLSCR3K7ERE1 68 aa13.84□□□□□ -0.19
TSPAN4-203ENST00000397397 Q8NBF4 154 aa13.84□□□□□ -0.19
TSPAN4-203ENST00000397397 BAALC-AS2P0C853 105 aa13.83□□□□□ -0.2
TSPAN4-203ENST00000397397 H3BMG7 143 aa13.82□□□□□ -0.2
TSPAN4-203ENST00000397397 SSBP3-AS1Q7Z2R9 100 aa13.82□□□□□ -0.2
TSPAN4-203ENST00000397397 C9JAW5 83 aa13.81□□□□□ -0.2
TSPAN4-203ENST00000397397 NDUFV3P56181 108 aaKnown RBP13.81□□□□□ -0.2
TSPAN4-203ENST00000397397 K7EP34 96 aa13.8□□□□□ -0.2
TSPAN4-203ENST00000397397 UBE2V1Q13404 147 aa13.77□□□□□ -0.21
TSPAN4-203ENST00000397397 LINC00304Q8N9R0 145 aa13.75□□□□□ -0.21
TSPAN4-203ENST00000397397 IGLV8-61A0A075B6I0 122 aa13.74□□□□□ -0.21
TSPAN4-203ENST00000397397 GTF2H5Q6ZYL4 71 aa13.74□□□□□ -0.21
TSPAN4-203ENST00000397397 MTURNQ8N3F0 131 aa13.74□□□□□ -0.21
TSPAN4-203ENST00000397397 ANKRD29Q8N6D5 301 aa13.73□□□□□ -0.21
TSPAN4-203ENST00000397397 A0A1B0GV72 72 aa13.72□□□□□ -0.21
TSPAN4-203ENST00000397397 A0A0G2JQZ4 141 aa13.71□□□□□ -0.22
TSPAN4-203ENST00000397397 C4orf48Q5BLP8 95 aa13.71□□□□□ -0.22
TSPAN4-203ENST00000397397 Q6JHZ5 121 aa13.71□□□□□ -0.22
TSPAN4-203ENST00000397397 H3BT86 120 aa13.7□□□□□ -0.22
TSPAN4-203ENST00000397397 SPAG11AQ6PDA7 123 aa13.68□□□□□ -0.22
TSPAN4-203ENST00000397397 IGFL1Q6UW32 110 aa13.68□□□□□ -0.22
TSPAN4-203ENST00000397397 HRCT1Q6UXD1 115 aa13.66□□□□□ -0.22
TSPAN4-203ENST00000397397 A0A1B0GV90 55 aa13.63□□□□□ -0.23
TSPAN4-203ENST00000397397 RBM3P98179 157 aaKnown RBP13.63□□□□□ -0.23
TSPAN4-203ENST00000397397 PRO0461Q9UI25 63 aa13.63□□□□□ -0.23
TSPAN4-203ENST00000397397 JMJD7-PLA2G4BH0Y9G9 81 aa13.61□□□□□ -0.23
TSPAN4-203ENST00000397397 SPINK1P00995 79 aa13.61□□□□□ -0.23
TSPAN4-203ENST00000397397 SMCPP49901 116 aaPredicted RBP13.61□□□□□ -0.23
TSPAN4-203ENST00000397397 CD164Q04900 197 aa13.61□□□□□ -0.23
TSPAN4-203ENST00000397397 DSCR8Q96T75 97 aa13.58□□□□□ -0.24
TSPAN4-203ENST00000397397 HMCN2Q8NDA2 5059 aa13.58□□□□□ -0.24
TSPAN4-203ENST00000397397 TRBV7-4A0A0J9YYF1 115 aa13.55□□□□□ -0.24
TSPAN4-203ENST00000397397 F8W1H4 67 aa13.55□□□□□ -0.24
TSPAN4-203ENST00000397397 OBSCN-AS1Q96MR7 158 aa13.55□□□□□ -0.24
TSPAN4-203ENST00000397397 RPS29P62273 56 aaKnown RBP13.53□□□□□ -0.24
TSPAN4-203ENST00000397397 A0A1W2PNM2 257 aa13.52□□□□□ -0.25
TSPAN4-203ENST00000397397 TEN1Q86WV5 123 aa13.52□□□□□ -0.25
TSPAN4-203ENST00000397397 TRBV7-7A0A0K0K1E9 115 aa13.51□□□□□ -0.25
TSPAN4-203ENST00000397397 Q6Q795 121 aa13.51□□□□□ -0.25
TSPAN4-203ENST00000397397 C14orf132Q9NPU4 83 aa13.51□□□□□ -0.25
TSPAN4-203ENST00000397397 LIMD2Q9BT23 127 aa13.5□□□□□ -0.25
TSPAN4-203ENST00000397397 CCKP06307 115 aa13.49□□□□□ -0.25
TSPAN4-203ENST00000397397 VPS25Q9BRG1 176 aa13.48□□□□□ -0.25
TSPAN4-203ENST00000397397 LOC110117498A0A087WWA1 95 aa13.47□□□□□ -0.25
TSPAN4-203ENST00000397397 Q6ZQT0 140 aa13.47□□□□□ -0.25
TSPAN4-203ENST00000397397 PDE6GP18545 87 aa13.46□□□□□ -0.26
TSPAN4-203ENST00000397397 Q5XG85 94 aa13.43□□□□□ -0.26
TSPAN4-203ENST00000397397 RETNLBQ9BQ08 111 aa13.43□□□□□ -0.26
TSPAN4-203ENST00000397397 A0A087WSZ3 146 aa13.41□□□□□ -0.26
TSPAN4-203ENST00000397397 ETDBQ3ZM63 59 aa13.4□□□□□ -0.26
TSPAN4-203ENST00000397397 C21orf62-AS1Q17RA5 79 aa13.38□□□□□ -0.27
TSPAN4-203ENST00000397397 SS18L2Q9UHA2 77 aa13.38□□□□□ -0.27
TSPAN4-203ENST00000397397 PRR4Q16378 134 aa13.34□□□□□ -0.27
TSPAN4-203ENST00000397397 ASB16-AS1Q495Z4 193 aa13.33□□□□□ -0.28
TSPAN4-203ENST00000397397 C1orf195Q5TG92 126 aa13.31□□□□□ -0.28
TSPAN4-203ENST00000397397 A0A1B0GW54 56 aa13.3□□□□□ -0.28
TSPAN4-203ENST00000397397 FP248Q71RG6 208 aaPredicted RBP13.28□□□□□ -0.28
TSPAN4-203ENST00000397397 IGLV7-46A0A075B6I9 117 aa13.24□□□□□ -0.29
TSPAN4-203ENST00000397397 Q96NJ1 140 aa13.22□□□□□ -0.29
TSPAN4-203ENST00000397397 UBR4Q5T4S7 5183 aa13.2□□□□□ -0.3
TSPAN4-203ENST00000397397 LRP2P98164 4655 aa13.18□□□□□ -0.3
TSPAN4-203ENST00000397397 LINC00472Q9H8W2 130 aa13.18□□□□□ -0.3
TSPAN4-203ENST00000397397 NREPQ16612 68 aa13.16□□□□□ -0.3
TSPAN4-203ENST00000397397 DEFB116Q30KQ4 102 aa13.16□□□□□ -0.3
TSPAN4-203ENST00000397397 IGKV4-1P06312 121 aa13.13□□□□□ -0.31
TSPAN4-203ENST00000397397 SIGMAR1Q99720 223 aa13.13□□□□□ -0.31
TSPAN4-203ENST00000397397 LINC00846Q9NV44 126 aa13.11□□□□□ -0.31
TSPAN4-203ENST00000397397 TPRXLQ17RH7 258 aa13.08□□□□□ -0.32
TSPAN4-203ENST00000397397 J3KT08 172 aa13.07□□□□□ -0.32
TSPAN4-203ENST00000397397 Q6ZVQ6 151 aa13.07□□□□□ -0.32
TSPAN4-203ENST00000397397 LPAP08519 4548 aa13.07□□□□□ -0.32
TSPAN4-203ENST00000397397 KRTAP13-3Q3SY46 172 aa13.06□□□□□ -0.32
TSPAN4-203ENST00000397397 UBL5Q9BZL1 73 aa13.05□□□□□ -0.32
TSPAN4-203ENST00000397397 C9orf92A6NGG3 77 aa13.03□□□□□ -0.32
TSPAN4-203ENST00000397397 ACYP1P07311 99 aa13.03□□□□□ -0.32
TSPAN4-203ENST00000397397 FAM240AA0A1B0GVK7 77 aa13.01□□□□□ -0.33
TSPAN4-203ENST00000397397 CDIP1Q9H305 208 aa12.99□□□□□ -0.33
TSPAN4-203ENST00000397397 BPY2O14599 106 aa12.98□□□□□ -0.33
TSPAN4-203ENST00000397397 J3QR89 54 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms