RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 LCE1AQ5T7P2 110 aa4.72□□□□□ -1.65
CAPN3-208ENST00000397204 SVBPQ8N300 66 aa4.72□□□□□ -1.65
CAPN3-208ENST00000397204 SPANXCQ9NY87 97 aa4.72□□□□□ -1.65
CAPN3-208ENST00000397204 LAMTOR3Q9UHA4 124 aa4.72□□□□□ -1.65
CAPN3-208ENST00000397204 APOC3P02656 99 aa4.71□□□□□ -1.66
CAPN3-208ENST00000397204 LGALS3P17931 250 aaKnown RBP4.71□□□□□ -1.66
CAPN3-208ENST00000397204 HERVK_113P61574 105 aa4.71□□□□□ -1.66
CAPN3-208ENST00000397204 DHRS4-AS1Q9P1J3 65 aa4.71□□□□□ -1.66
CAPN3-208ENST00000397204 DPM2O94777 84 aa4.7□□□□□ -1.66
CAPN3-208ENST00000397204 LEPROTL1O95214 131 aa4.7□□□□□ -1.66
CAPN3-208ENST00000397204 HRCT1Q6UXD1 115 aa4.7□□□□□ -1.66
CAPN3-208ENST00000397204 M0R2T5 61 aa4.69□□□□□ -1.66
CAPN3-208ENST00000397204 ADAMTSL4-AS1Q5T5F5 129 aa4.69□□□□□ -1.66
CAPN3-208ENST00000397204 Q5XG85 94 aa4.69□□□□□ -1.66
CAPN3-208ENST00000397204 SOSTDC1Q6X4U4 206 aa4.69□□□□□ -1.66
CAPN3-208ENST00000397204 A0A0J9YXY3 114 aa4.68□□□□□ -1.66
CAPN3-208ENST00000397204 A0A1B0GX51 115 aa4.68□□□□□ -1.66
CAPN3-208ENST00000397204 COLCA2A8K830 154 aa4.68□□□□□ -1.66
CAPN3-208ENST00000397204 IGKCP01834 107 aa4.68□□□□□ -1.66
CAPN3-208ENST00000397204 RPS28P62857 69 aaKnown RBP4.68□□□□□ -1.66
CAPN3-208ENST00000397204 C1orf195Q5TG92 126 aa4.68□□□□□ -1.66
CAPN3-208ENST00000397204 YPEL4Q96NS1 127 aa4.68□□□□□ -1.66
CAPN3-208ENST00000397204 FLGP20930 4061 aaPredicted RBP4.67□□□□□ -1.66
CAPN3-208ENST00000397204 H7C2G1 150 aa4.67□□□□□ -1.66
CAPN3-208ENST00000397204 NPC2P61916 151 aa4.67□□□□□ -1.66
CAPN3-208ENST00000397204 COX6B2Q6YFQ2 88 aa4.67□□□□□ -1.66
CAPN3-208ENST00000397204 TEX49A0A1B0GTD5 131 aa4.66□□□□□ -1.66
CAPN3-208ENST00000397204 J3KT08 172 aa4.66□□□□□ -1.66
CAPN3-208ENST00000397204 E9PLD3 99 aa4.65□□□□□ -1.67
CAPN3-208ENST00000397204 SERF1AO75920 110 aa4.65□□□□□ -1.67
CAPN3-208ENST00000397204 ELOF1P60002 83 aaKnown RBP4.65□□□□□ -1.67
CAPN3-208ENST00000397204 RPL37P61927 97 aaKnown RBP4.65□□□□□ -1.67
CAPN3-208ENST00000397204 LINC00308Q8TCZ7 52 aa4.65□□□□□ -1.67
CAPN3-208ENST00000397204 PMCHL2Q9BQD1 86 aa4.65□□□□□ -1.67
CAPN3-208ENST00000397204 SPANXDQ9BXN6 97 aa4.65□□□□□ -1.67
CAPN3-208ENST00000397204 FABP4P15090 132 aa4.64□□□□□ -1.67
CAPN3-208ENST00000397204 COX7BP24311 80 aa4.64□□□□□ -1.67
CAPN3-208ENST00000397204 Q1RN00 199 aa4.64□□□□□ -1.67
CAPN3-208ENST00000397204 DEFB105AQ8NG35 78 aa4.64□□□□□ -1.67
CAPN3-208ENST00000397204 TRBV7-6A0A0J9YX20 115 aa4.63□□□□□ -1.67
CAPN3-208ENST00000397204 TIMM17BO60830 172 aa4.63□□□□□ -1.67
CAPN3-208ENST00000397204 TRGC2P03986 189 aa4.63□□□□□ -1.67
CAPN3-208ENST00000397204 HSD52Q0P140 79 aa4.63□□□□□ -1.67
CAPN3-208ENST00000397204 C6orf99Q4VX62 202 aa4.63□□□□□ -1.67
CAPN3-208ENST00000397204 GTF2H5Q6ZYL4 71 aa4.63□□□□□ -1.67
CAPN3-208ENST00000397204 HIST3H2BBQ8N257 126 aa4.63□□□□□ -1.67
CAPN3-208ENST00000397204 LITAFQ99732 161 aa4.63□□□□□ -1.67
CAPN3-208ENST00000397204 ANAPC13Q9BS18 74 aa4.63□□□□□ -1.67
CAPN3-208ENST00000397204 SMIM29Q86T20 159 aa4.62□□□□□ -1.67
CAPN3-208ENST00000397204 A0A0A0MQY5 61 aa4.61□□□□□ -1.67
CAPN3-208ENST00000397204 TCL1BO95988 128 aa4.61□□□□□ -1.67
CAPN3-208ENST00000397204 IGLV5-48A0A075B6I7 105 aa4.6□□□□□ -1.67
CAPN3-208ENST00000397204 C9JAW5 83 aa4.6□□□□□ -1.67
CAPN3-208ENST00000397204 J3QR89 54 aa4.6□□□□□ -1.67
CAPN3-208ENST00000397204 A0A1B0GWB2 263 aa4.59□□□□□ -1.67
CAPN3-208ENST00000397204 BATFQ16520 125 aa4.58□□□□□ -1.68
CAPN3-208ENST00000397204 MPLKIPQ8TAP9 179 aa4.58□□□□□ -1.68
CAPN3-208ENST00000397204 A0A0G2JQZ4 141 aa4.57□□□□□ -1.68
CAPN3-208ENST00000397204 ZNF815PA8K554 130 aa4.57□□□□□ -1.68
CAPN3-208ENST00000397204 SYS1-DBNDD2H3BUS1 97 aa4.57□□□□□ -1.68
CAPN3-208ENST00000397204 ATP11AUNQ6ZP68 121 aa4.57□□□□□ -1.68
CAPN3-208ENST00000397204 SSPOA2VEC9 5147 aa4.56□□□□□ -1.68
CAPN3-208ENST00000397204 FAM236DA0A1B0GTK5 79 aa4.56□□□□□ -1.68
CAPN3-208ENST00000397204 FAM236CP0DP71 79 aa4.56□□□□□ -1.68
CAPN3-208ENST00000397204 COPS9Q8WXC6 57 aa4.56□□□□□ -1.68
CAPN3-208ENST00000397204 NHP2Q9NX24 153 aaKnown RBP4.56□□□□□ -1.68
CAPN3-208ENST00000397204 A6NDN8 102 aa4.55□□□□□ -1.68
CAPN3-208ENST00000397204 CFC1P0CG37 223 aa4.55□□□□□ -1.68
CAPN3-208ENST00000397204 IFITM1P13164 125 aa4.55□□□□□ -1.68
CAPN3-208ENST00000397204 LINC01545Q5VT33 79 aa4.55□□□□□ -1.68
CAPN3-208ENST00000397204 Q6Q795 121 aa4.55□□□□□ -1.68
CAPN3-208ENST00000397204 HIST1H2BLQ99880 126 aa4.55□□□□□ -1.68
CAPN3-208ENST00000397204 IGKV2D-30A0A075B6S6 120 aa4.54□□□□□ -1.68
CAPN3-208ENST00000397204 Q6ZVH6 145 aa4.54□□□□□ -1.68
CAPN3-208ENST00000397204 Q75L30 129 aa4.54□□□□□ -1.68
CAPN3-208ENST00000397204 F8WEM9 126 aa4.53□□□□□ -1.68
CAPN3-208ENST00000397204 PMAIP1Q13794 54 aa4.53□□□□□ -1.68
CAPN3-208ENST00000397204 SCGB1D4Q6XE38 83 aa4.53□□□□□ -1.68
CAPN3-208ENST00000397204 PCP2Q8IVA1 136 aa4.53□□□□□ -1.68
CAPN3-208ENST00000397204 TTTY13Q9BZ97 58 aa4.53□□□□□ -1.68
CAPN3-208ENST00000397204 USH2AO75445 5202 aa4.52□□□□□ -1.69
CAPN3-208ENST00000397204 Q6JHZ5 121 aa4.52□□□□□ -1.69
CAPN3-208ENST00000397204 NAA38Q9BRA0 125 aaKnown RBP4.52□□□□□ -1.69
CAPN3-208ENST00000397204 TRAV13-2A0A0B4J235 113 aa4.51□□□□□ -1.69
CAPN3-208ENST00000397204 FAM240AA0A1B0GVK7 77 aa4.51□□□□□ -1.69
CAPN3-208ENST00000397204 CCDC179H3BU77 68 aa4.51□□□□□ -1.69
CAPN3-208ENST00000397204 MUSTN1Q8IVN3 82 aa4.51□□□□□ -1.69
CAPN3-208ENST00000397204 OBSCN-AS1Q96MR7 158 aa4.51□□□□□ -1.69
CAPN3-208ENST00000397204 VAMP8Q9BV40 100 aa4.51□□□□□ -1.69
CAPN3-208ENST00000397204 TRBV7-7A0A0K0K1E9 115 aa4.5□□□□□ -1.69
CAPN3-208ENST00000397204 COA6Q5JTJ3 125 aaKnown RBP4.5□□□□□ -1.69
CAPN3-208ENST00000397204 SMIM11BQ8TCY0 68 aa4.5□□□□□ -1.69
CAPN3-208ENST00000397204 UQCR10Q9UDW1 63 aa4.5□□□□□ -1.69
CAPN3-208ENST00000397204 HIST1H2BKO60814 126 aa4.49□□□□□ -1.69
CAPN3-208ENST00000397204 HIST1H2BJP06899 126 aa4.49□□□□□ -1.69
CAPN3-208ENST00000397204 HIST1H2BOP23527 126 aa4.49□□□□□ -1.69
CAPN3-208ENST00000397204 HIST1H2BBP33778 126 aa4.49□□□□□ -1.69
CAPN3-208ENST00000397204 HIST1H2BDP58876 126 aa4.49□□□□□ -1.69
CAPN3-208ENST00000397204 HIST1H2BCP62807 126 aa4.49□□□□□ -1.69
CAPN3-208ENST00000397204 HIST2H2BEQ16778 126 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms