RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 PSORS1C2Q9UIG4 136 aa9.59□□□□□ -0.87
MCF2L-205ENST00000397017 ZNF706Q9Y5V0 76 aaPredicted RBP9.59□□□□□ -0.87
MCF2L-205ENST00000397017 RPL37AP61513 92 aaKnown RBP9.58□□□□□ -0.88
MCF2L-205ENST00000397017 IGKV4-1P06312 121 aa9.57□□□□□ -0.88
MCF2L-205ENST00000397017 Q8NBF4 154 aa9.57□□□□□ -0.88
MCF2L-205ENST00000397017 TRBV7-7A0A0K0K1E9 115 aa9.56□□□□□ -0.88
MCF2L-205ENST00000397017 PRR4Q16378 134 aa9.56□□□□□ -0.88
MCF2L-205ENST00000397017 LOC110117498A0A087WWA1 95 aa9.56□□□□□ -0.88
MCF2L-205ENST00000397017 PLA2G2DQ9UNK4 145 aa9.56□□□□□ -0.88
MCF2L-205ENST00000397017 PRO0628Q9UI54 55 aa9.54□□□□□ -0.88
MCF2L-205ENST00000397017 IGHV6-1A0A0B4J1U7 121 aa9.54□□□□□ -0.88
MCF2L-205ENST00000397017 IGFL1Q6UW32 110 aa9.53□□□□□ -0.88
MCF2L-205ENST00000397017 FBN3Q75N90 2809 aa9.53□□□□□ -0.88
MCF2L-205ENST00000397017 TRBV7-4A0A0J9YYF1 115 aa9.52□□□□□ -0.89
MCF2L-205ENST00000397017 A0A1W2PNM2 257 aa9.51□□□□□ -0.89
MCF2L-205ENST00000397017 CSMD3Q7Z407 3707 aa9.51□□□□□ -0.89
MCF2L-205ENST00000397017 KRTAP10-2P60368 255 aa9.5□□□□□ -0.89
MCF2L-205ENST00000397017 OXTP01178 125 aa9.49□□□□□ -0.89
MCF2L-205ENST00000397017 KRTAP7-1Q8IUC3 87 aa9.49□□□□□ -0.89
MCF2L-205ENST00000397017 CRYGAP11844 174 aa9.49□□□□□ -0.89
MCF2L-205ENST00000397017 IGLV5-37A0A075B6J1 123 aa9.48□□□□□ -0.89
MCF2L-205ENST00000397017 MP68P56378 58 aa9.48□□□□□ -0.89
MCF2L-205ENST00000397017 KRTAP11-1Q8IUC1 163 aa9.48□□□□□ -0.89
MCF2L-205ENST00000397017 RETNLBQ9BQ08 111 aa9.48□□□□□ -0.89
MCF2L-205ENST00000397017 SMIM29Q86T20 159 aa9.47□□□□□ -0.89
MCF2L-205ENST00000397017 DMBT1Q9UGM3 2413 aaPredicted RBP9.46□□□□□ -0.9
MCF2L-205ENST00000397017 ZNF861PO60384 105 aa9.46□□□□□ -0.9
MCF2L-205ENST00000397017 SPACA4Q8TDM5 124 aa9.46□□□□□ -0.9
MCF2L-205ENST00000397017 OBSCN-AS1Q96MR7 158 aa9.46□□□□□ -0.9
MCF2L-205ENST00000397017 K7EQZ3 153 aa9.45□□□□□ -0.9
MCF2L-205ENST00000397017 SPTSSBQ8NFR3 76 aa9.45□□□□□ -0.9
MCF2L-205ENST00000397017 FLG2Q5D862 2391 aaPredicted RBP9.44□□□□□ -0.9
MCF2L-205ENST00000397017 RPS28P62857 69 aaKnown RBP9.43□□□□□ -0.9
MCF2L-205ENST00000397017 CXCL6P80162 114 aa9.43□□□□□ -0.9
MCF2L-205ENST00000397017 SRRM2Q9UQ35 2752 aaKnown RBP9.42□□□□□ -0.9
MCF2L-205ENST00000397017 COL7A1Q02388 2944 aa9.42□□□□□ -0.9
MCF2L-205ENST00000397017 SPRR1AP35321 89 aa9.42□□□□□ -0.9
MCF2L-205ENST00000397017 CASC2Q6XLA1 102 aa9.42□□□□□ -0.9
MCF2L-205ENST00000397017 Q6ZRN7 208 aaPredicted RBP9.42□□□□□ -0.9
MCF2L-205ENST00000397017 LINC01600Q96MT4 127 aa9.41□□□□□ -0.9
MCF2L-205ENST00000397017 MEGF8Q7Z7M0 2845 aa9.41□□□□□ -0.9
MCF2L-205ENST00000397017 Q6ZR54 194 aa9.4□□□□□ -0.9
MCF2L-205ENST00000397017 PLA2G1BP04054 148 aaKnown RBP9.4□□□□□ -0.91
MCF2L-205ENST00000397017 LINC00208Q96KT6 92 aa9.4□□□□□ -0.91
MCF2L-205ENST00000397017 PSPHP1O15172 72 aa9.39□□□□□ -0.91
MCF2L-205ENST00000397017 IGLV7-43P04211 117 aa9.39□□□□□ -0.91
MCF2L-205ENST00000397017 Q5XG85 94 aa9.39□□□□□ -0.91
MCF2L-205ENST00000397017 TRAV7A0A075B6U4 112 aa9.39□□□□□ -0.91
MCF2L-205ENST00000397017 SPRR4Q96PI1 79 aa9.38□□□□□ -0.91
MCF2L-205ENST00000397017 HCG22E2RYF7 251 aa9.38□□□□□ -0.91
MCF2L-205ENST00000397017 IGLV5-48A0A075B6I7 105 aa9.38□□□□□ -0.91
MCF2L-205ENST00000397017 SMIM26A0A096LP01 95 aa9.38□□□□□ -0.91
MCF2L-205ENST00000397017 KRTAP10-1P60331 282 aa9.37□□□□□ -0.91
MCF2L-205ENST00000397017 KRTAP4-16G5E9R7 235 aaPredicted RBP9.35□□□□□ -0.91
MCF2L-205ENST00000397017 SERP1Q9Y6X1 66 aa9.35□□□□□ -0.91
MCF2L-205ENST00000397017 TYMSOSQ8TAI1 123 aa9.33□□□□□ -0.92
MCF2L-205ENST00000397017 TMEM254Q8TBM7 123 aa9.33□□□□□ -0.92
MCF2L-205ENST00000397017 PCOTHQ58A44 107 aa9.32□□□□□ -0.92
MCF2L-205ENST00000397017 PLAC8Q9NZF1 115 aa9.3□□□□□ -0.92
MCF2L-205ENST00000397017 PMAIP1Q13794 54 aa9.3□□□□□ -0.92
MCF2L-205ENST00000397017 hDV103S1A0JD37 113 aa9.26□□□□□ -0.93
MCF2L-205ENST00000397017 H0Y9P7 68 aa9.25□□□□□ -0.93
MCF2L-205ENST00000397017 DSCR10P59022 87 aa9.22□□□□□ -0.93
MCF2L-205ENST00000397017 A8MWP4 228 aa9.21□□□□□ -0.93
MCF2L-205ENST00000397017 FAM229AH3BQW9 127 aa9.21□□□□□ -0.93
MCF2L-205ENST00000397017 HUWE1Q7Z6Z7 4374 aaKnown RBP9.21□□□□□ -0.94
MCF2L-205ENST00000397017 A0A1B0GW54 56 aa9.2□□□□□ -0.94
MCF2L-205ENST00000397017 PRR26Q8N8Z3 221 aa9.2□□□□□ -0.94
MCF2L-205ENST00000397017 LCE6AA0A183 80 aa9.19□□□□□ -0.94
MCF2L-205ENST00000397017 PRR15Q8IV56 129 aa9.19□□□□□ -0.94
MCF2L-205ENST00000397017 H7BZZ5 65 aa9.18□□□□□ -0.94
MCF2L-205ENST00000397017 FP248Q71RG6 208 aaPredicted RBP9.18□□□□□ -0.94
MCF2L-205ENST00000397017 C1orf64Q8NEQ6 169 aa9.17□□□□□ -0.94
MCF2L-205ENST00000397017 DNHD1Q96M86 4753 aa9.16□□□□□ -0.94
MCF2L-205ENST00000397017 IGKV2D-30A0A075B6S6 120 aa9.14□□□□□ -0.95
MCF2L-205ENST00000397017 IGKV2-30P06310 120 aa9.14□□□□□ -0.95
MCF2L-205ENST00000397017 LIMD2Q9BT23 127 aa9.14□□□□□ -0.95
MCF2L-205ENST00000397017 SSBP3-AS1Q7Z2R9 100 aa9.14□□□□□ -0.95
MCF2L-205ENST00000397017 ANK2Q01484 3957 aa9.14□□□□□ -0.95
MCF2L-205ENST00000397017 FAM229BQ4G0N7 80 aa9.13□□□□□ -0.95
MCF2L-205ENST00000397017 CHKB-CPT1BH3BT56 60 aa9.12□□□□□ -0.95
MCF2L-205ENST00000397017 LINC00313P59037 77 aa9.12□□□□□ -0.95
MCF2L-205ENST00000397017 C9orf92A6NGG3 77 aa9.11□□□□□ -0.95
MCF2L-205ENST00000397017 NDUFC1O43677 76 aa9.11□□□□□ -0.95
MCF2L-205ENST00000397017 KRTAP21-3Q3LHN1 58 aa9.11□□□□□ -0.95
MCF2L-205ENST00000397017 C8orf17Q9NRJ1 99 aa9.11□□□□□ -0.95
MCF2L-205ENST00000397017 A0A087X002 238 aa9.1□□□□□ -0.95
MCF2L-205ENST00000397017 LINC00304Q8N9R0 145 aa9.1□□□□□ -0.95
MCF2L-205ENST00000397017 Q96NJ1 140 aa9.09□□□□□ -0.95
MCF2L-205ENST00000397017 SPRR1BP22528 89 aa9.09□□□□□ -0.95
MCF2L-205ENST00000397017 A0A1B0GVX0 72 aa9.09□□□□□ -0.95
MCF2L-205ENST00000397017 TRAV22A0A0B4J277 110 aa9.08□□□□□ -0.96
MCF2L-205ENST00000397017 MRPL34Q9BQ48 92 aaKnown RBP9.06□□□□□ -0.96
MCF2L-205ENST00000397017 A6NED7 52 aa9.05□□□□□ -0.96
MCF2L-205ENST00000397017 IGLV8-61A0A075B6I0 122 aa9.03□□□□□ -0.96
MCF2L-205ENST00000397017 A8MUN3 132 aa9.03□□□□□ -0.96
MCF2L-205ENST00000397017 LINC00472Q9H8W2 130 aa9.02□□□□□ -0.96
MCF2L-205ENST00000397017 OCR1Q9BZK8 76 aa9.02□□□□□ -0.97
MCF2L-205ENST00000397017 DNAH9Q9NYC9 4486 aa9.02□□□□□ -0.97
MCF2L-205ENST00000397017 SPINK1P00995 79 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms