RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 MEGF8Q7Z7M0 2845 aa8.43□□□□□ -1.06
TRIM40-207ENST00000396581 CYP4F30PQ9H0H9 118 aa8.42□□□□□ -1.06
TRIM40-207ENST00000396581 C1orf64Q8NEQ6 169 aa8.41□□□□□ -1.06
TRIM40-207ENST00000396581 PSCAO43653 123 aa8.41□□□□□ -1.06
TRIM40-207ENST00000396581 IGFL1Q6UW32 110 aa8.41□□□□□ -1.06
TRIM40-207ENST00000396581 BRK1Q8WUW1 75 aa8.41□□□□□ -1.06
TRIM40-207ENST00000396581 Q1T7F1 81 aa8.4□□□□□ -1.06
TRIM40-207ENST00000396581 DNAH1Q9P2D7 4330 aa8.39□□□□□ -1.07
TRIM40-207ENST00000396581 PRKDCP78527 4128 aaKnown RBP8.38□□□□□ -1.07
TRIM40-207ENST00000396581 NDUFB1O75438 58 aa8.36□□□□□ -1.07
TRIM40-207ENST00000396581 KRTAP29-1A8MX34 341 aaPredicted RBP8.35□□□□□ -1.07
TRIM40-207ENST00000396581 APLNQ9ULZ1 77 aa8.34□□□□□ -1.07
TRIM40-207ENST00000396581 CSMD3Q7Z407 3707 aa8.34□□□□□ -1.07
TRIM40-207ENST00000396581 A0A0G2JQZ4 141 aa8.34□□□□□ -1.07
TRIM40-207ENST00000396581 A0A1W2PNN7 141 aa8.34□□□□□ -1.07
TRIM40-207ENST00000396581 TENM2Q9NT68 2774 aa8.34□□□□□ -1.07
TRIM40-207ENST00000396581 C16orf90A8MZG2 172 aa8.33□□□□□ -1.08
TRIM40-207ENST00000396581 PKIGQ9Y2B9 76 aa8.33□□□□□ -1.08
TRIM40-207ENST00000396581 A0A087WSZ3 146 aa8.33□□□□□ -1.08
TRIM40-207ENST00000396581 TRAV22A0A0B4J277 110 aa8.32□□□□□ -1.08
TRIM40-207ENST00000396581 NUPR2A6NF83 97 aa8.31□□□□□ -1.08
TRIM40-207ENST00000396581 A0A096LNI7 61 aa8.31□□□□□ -1.08
TRIM40-207ENST00000396581 SPRR1BP22528 89 aa8.31□□□□□ -1.08
TRIM40-207ENST00000396581 CNBPP62633 177 aaKnown RBP8.31□□□□□ -1.08
TRIM40-207ENST00000396581 PRLHP81277 87 aa8.31□□□□□ -1.08
TRIM40-207ENST00000396581 H3BPC8 53 aa8.3□□□□□ -1.08
TRIM40-207ENST00000396581 MP68P56378 58 aa8.3□□□□□ -1.08
TRIM40-207ENST00000396581 DEFB116Q30KQ4 102 aa8.3□□□□□ -1.08
TRIM40-207ENST00000396581 WFDC13Q8IUB5 93 aa8.3□□□□□ -1.08
TRIM40-207ENST00000396581 FBN3Q75N90 2809 aa8.29□□□□□ -1.08
TRIM40-207ENST00000396581 LRCOL1A6NCL2 159 aa8.29□□□□□ -1.08
TRIM40-207ENST00000396581 PRR15Q8IV56 129 aa8.29□□□□□ -1.08
TRIM40-207ENST00000396581 LYSTQ99698 3801 aa8.28□□□□□ -1.08
TRIM40-207ENST00000396581 H0Y9J4 135 aa8.28□□□□□ -1.08
TRIM40-207ENST00000396581 SPANXA2-OT1Q8N9U9 137 aa8.28□□□□□ -1.08
TRIM40-207ENST00000396581 DYNC2H1Q8NCM8 4307 aaKnown RBP8.28□□□□□ -1.08
TRIM40-207ENST00000396581 C1orf195Q5TG92 126 aa8.27□□□□□ -1.09
TRIM40-207ENST00000396581 UBE2AP49459 152 aa8.26□□□□□ -1.09
TRIM40-207ENST00000396581 RPL37AP61513 92 aaKnown RBP8.26□□□□□ -1.09
TRIM40-207ENST00000396581 UBE2DNLQ8IWF7 75 aa8.26□□□□□ -1.09
TRIM40-207ENST00000396581 LINC00472Q9H8W2 130 aa8.26□□□□□ -1.09
TRIM40-207ENST00000396581 LINC00208Q96KT6 92 aa8.25□□□□□ -1.09
TRIM40-207ENST00000396581 KRTAP1-5Q9BYS1 174 aa8.25□□□□□ -1.09
TRIM40-207ENST00000396581 A8MWP4 228 aa8.25□□□□□ -1.09
TRIM40-207ENST00000396581 PRR4Q16378 134 aa8.25□□□□□ -1.09
TRIM40-207ENST00000396581 CASC2Q6XLA1 102 aa8.25□□□□□ -1.09
TRIM40-207ENST00000396581 DNAH7Q8WXX0 4024 aa8.24□□□□□ -1.09
TRIM40-207ENST00000396581 V9GYY9 64 aa8.24□□□□□ -1.09
TRIM40-207ENST00000396581 IGKV2-24A0A0C4DH68 120 aa8.23□□□□□ -1.09
TRIM40-207ENST00000396581 H0Y9P7 68 aa8.23□□□□□ -1.09
TRIM40-207ENST00000396581 KRTAP11-1Q8IUC1 163 aa8.23□□□□□ -1.09
TRIM40-207ENST00000396581 PLECQ15149 4684 aaKnown RBP8.21□□□□□ -1.1
TRIM40-207ENST00000396581 C9orf163Q8N9P6 203 aa8.21□□□□□ -1.1
TRIM40-207ENST00000396581 PSPHP1O15172 72 aa8.2□□□□□ -1.1
TRIM40-207ENST00000396581 PHF5AQ7RTV0 110 aaKnown RBP8.19□□□□□ -1.1
TRIM40-207ENST00000396581 TGP01266 2768 aa8.19□□□□□ -1.1
TRIM40-207ENST00000396581 STARD9Q9P2P6 4700 aa8.18□□□□□ -1.1
TRIM40-207ENST00000396581 NBDYA0A0U1RRE5 68 aa8.17□□□□□ -1.1
TRIM40-207ENST00000396581 MMP24-AS1A0A0U1RRL7 71 aa8.17□□□□□ -1.1
TRIM40-207ENST00000396581 C14orf177Q52M58 125 aa8.17□□□□□ -1.1
TRIM40-207ENST00000396581 ASB16-AS1Q495Z4 193 aa8.16□□□□□ -1.1
TRIM40-207ENST00000396581 Q5VV11 94 aa8.16□□□□□ -1.1
TRIM40-207ENST00000396581 A8MUN3 132 aa8.15□□□□□ -1.1
TRIM40-207ENST00000396581 KRTAP13-1Q8IUC0 172 aa8.15□□□□□ -1.1
TRIM40-207ENST00000396581 Q8N9P0 234 aaPredicted RBP8.15□□□□□ -1.1
TRIM40-207ENST00000396581 CHTF8P0CG12 524 aa8.15□□□□□ -1.11
TRIM40-207ENST00000396581 LIMD2Q9BT23 127 aa8.14□□□□□ -1.11
TRIM40-207ENST00000396581 IGLV7-46A0A075B6I9 117 aa8.13□□□□□ -1.11
TRIM40-207ENST00000396581 Q96NJ1 140 aa8.12□□□□□ -1.11
TRIM40-207ENST00000396581 Q6ZRN7 208 aaPredicted RBP8.11□□□□□ -1.11
TRIM40-207ENST00000396581 DNAH10Q8IVF4 4471 aa8.1□□□□□ -1.11
TRIM40-207ENST00000396581 VPS13DQ5THJ4 4388 aa8.1□□□□□ -1.11
TRIM40-207ENST00000396581 WWC2-AS2Q96NR7 200 aa8.09□□□□□ -1.11
TRIM40-207ENST00000396581 TP53AIP1Q9HCN2 124 aa8.09□□□□□ -1.11
TRIM40-207ENST00000396581 PMAIP1Q13794 54 aa8.08□□□□□ -1.12
TRIM40-207ENST00000396581 MOBPQ13875 183 aa8.07□□□□□ -1.12
TRIM40-207ENST00000396581 Q6ZR54 194 aa8.07□□□□□ -1.12
TRIM40-207ENST00000396581 LOC101927531A0A1B0GV80 90 aa8.07□□□□□ -1.12
TRIM40-207ENST00000396581 COA5Q86WW8 74 aa8.07□□□□□ -1.12
TRIM40-207ENST00000396581 LINC00483Q53H64 154 aa8.06□□□□□ -1.12
TRIM40-207ENST00000396581 KMT2AQ03164 3969 aa8.06□□□□□ -1.12
TRIM40-207ENST00000396581 PANO1I0J062 215 aa8.04□□□□□ -1.12
TRIM40-207ENST00000396581 Q75L30 129 aa8.04□□□□□ -1.12
TRIM40-207ENST00000396581 C8orf17Q9NRJ1 99 aa8.04□□□□□ -1.12
TRIM40-207ENST00000396581 A8MU10 97 aa8.02□□□□□ -1.12
TRIM40-207ENST00000396581 CHKB-CPT1BH3BT56 60 aa8.02□□□□□ -1.13
TRIM40-207ENST00000396581 PRR15LQ9BU68 103 aa8.02□□□□□ -1.13
TRIM40-207ENST00000396581 CD164Q04900 197 aa8.01□□□□□ -1.13
TRIM40-207ENST00000396581 SEC61GP60059 68 aa8.01□□□□□ -1.13
TRIM40-207ENST00000396581 LY6G6CO95867 125 aa8□□□□□ -1.13
TRIM40-207ENST00000396581 SPACA4Q8TDM5 124 aa8□□□□□ -1.13
TRIM40-207ENST00000396581 PLAC8Q9NZF1 115 aa8□□□□□ -1.13
TRIM40-207ENST00000396581 A0A087WTM6 91 aa7.99□□□□□ -1.13
TRIM40-207ENST00000396581 A0A1B0GVX0 72 aa7.99□□□□□ -1.13
TRIM40-207ENST00000396581 IGLV9-49A0A0B4J1Y8 123 aa7.98□□□□□ -1.13
TRIM40-207ENST00000396581 PCOTHQ58A44 107 aa7.98□□□□□ -1.13
TRIM40-207ENST00000396581 LINC01558Q9Y6Z2 57 aa7.98□□□□□ -1.13
TRIM40-207ENST00000396581 C1orf134Q5TEV5 83 aa7.97□□□□□ -1.13
TRIM40-207ENST00000396581 LCA10Q71F78 164 aa7.96□□□□□ -1.13
TRIM40-207ENST00000396581 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms